RNA–Protein interactions for RNA: ENST00000490786.1

CAPN13-207, Transcript of calpain 13, humanhuman

TSL 2

Gene CAPN13, Length 506 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-207ENST00000490786 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
CAPN13-207ENST00000490786 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
CAPN13-207ENST00000490786 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
CAPN13-207ENST00000490786 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
CAPN13-207ENST00000490786 POTEDQ86YR6 584 aa15.99■□□□□ 0.15
CAPN13-207ENST00000490786 FOXD1Q16676 465 aa15.53■□□□□ 0.08
CAPN13-207ENST00000490786 MSH5O43196 834 aa14.86□□□□□ -0.03
CAPN13-207ENST00000490786 PIAS4Q8N2W9 510 aaPredicted RBP14.31□□□□□ -0.12
CAPN13-207ENST00000490786 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
CAPN13-207ENST00000490786 ADRA2BP18089 450 aa13.78□□□□□ -0.2
CAPN13-207ENST00000490786 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
CAPN13-207ENST00000490786 CACNB1Q02641 598 aaPredicted RBP13.3□□□□□ -0.28
CAPN13-207ENST00000490786 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
CAPN13-207ENST00000490786 MAPK8IP2Q13387 824 aaPredicted RBP12.93□□□□□ -0.34
CAPN13-207ENST00000490786 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
CAPN13-207ENST00000490786 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
CAPN13-207ENST00000490786 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
CAPN13-207ENST00000490786 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
CAPN13-207ENST00000490786 POTEHQ6S545 545 aa12.36□□□□□ -0.43
CAPN13-207ENST00000490786 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
CAPN13-207ENST00000490786 DNAJC5BQ9UF47 199 aa11.9□□□□□ -0.5
CAPN13-207ENST00000490786 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
CAPN13-207ENST00000490786 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
CAPN13-207ENST00000490786 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
CAPN13-207ENST00000490786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
CAPN13-207ENST00000490786 DSG3P32926 999 aa11.52□□□□□ -0.57
CAPN13-207ENST00000490786 CAPN15O75808 1086 aa11.38□□□□□ -0.59
CAPN13-207ENST00000490786 SPINK5Q9NQ38 1064 aaPredicted RBP11.37□□□□□ -0.59
CAPN13-207ENST00000490786 U3KPZ7 1027 aaPredicted RBP11.25□□□□□ -0.61
CAPN13-207ENST00000490786 SP7Q8TDD2 431 aaPredicted RBP11.17□□□□□ -0.62
CAPN13-207ENST00000490786 CHRDL2Q6WN34 429 aa11.12□□□□□ -0.63
CAPN13-207ENST00000490786 ABCB7O75027 752 aa11.04□□□□□ -0.64
CAPN13-207ENST00000490786 NCBP3Q53F19 620 aaKnown RBP11.03□□□□□ -0.64
CAPN13-207ENST00000490786 RBM42Q9BTD8 480 aaKnown RBP11□□□□□ -0.65
CAPN13-207ENST00000490786 TRHP20396 242 aaPredicted RBP10.99□□□□□ -0.65
CAPN13-207ENST00000490786 ZNF219Q9P2Y4 722 aaPredicted RBP10.91□□□□□ -0.66
CAPN13-207ENST00000490786 NPM3O75607 178 aaKnown RBP10.88□□□□□ -0.67
CAPN13-207ENST00000490786 APLP2Q06481 763 aa10.82□□□□□ -0.68
CAPN13-207ENST00000490786 HAX1O00165 279 aa10.72□□□□□ -0.69
CAPN13-207ENST00000490786 KCNA4P22459 653 aa10.71□□□□□ -0.69
CAPN13-207ENST00000490786 PIP4P2Q8N4L2 257 aa10.66□□□□□ -0.7
CAPN13-207ENST00000490786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
CAPN13-207ENST00000490786 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
CAPN13-207ENST00000490786 HNRNPUL2Q1KMD3 747 aaKnown RBP10.62□□□□□ -0.71
CAPN13-207ENST00000490786 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
CAPN13-207ENST00000490786 PLSCR2Q9NRY7 297 aa10.55□□□□□ -0.72
CAPN13-207ENST00000490786 EVX2Q03828 476 aa10.53□□□□□ -0.72
CAPN13-207ENST00000490786 SAMD1Q6SPF0 538 aaPredicted RBP10.52□□□□□ -0.73
CAPN13-207ENST00000490786 POLA2Q14181 598 aa10.5□□□□□ -0.73
CAPN13-207ENST00000490786 REM2Q8IYK8 340 aaPredicted RBP10.49□□□□□ -0.73
CAPN13-207ENST00000490786 LHX8Q68G74 356 aa10.48□□□□□ -0.73
CAPN13-207ENST00000490786 FXR2P51116 673 aaKnown RBP eCLIP10.45□□□□□ -0.74
CAPN13-207ENST00000490786 PITPNM1O00562 1244 aa10.37□□□□□ -0.75
CAPN13-207ENST00000490786 EHMT2Q96KQ7 1210 aa10.37□□□□□ -0.75
CAPN13-207ENST00000490786 SLC4A1APQ9BWU0 796 aaKnown RBP10.25□□□□□ -0.77
CAPN13-207ENST00000490786 GABBR2O75899 941 aa10.23□□□□□ -0.77
CAPN13-207ENST00000490786 OSCARQ8IYS5 282 aa10.19□□□□□ -0.78
CAPN13-207ENST00000490786 ZBTB12Q9Y330 459 aaPredicted RBP10.19□□□□□ -0.78
CAPN13-207ENST00000490786 C19orf67A6NJJ6 358 aa10.16□□□□□ -0.78
CAPN13-207ENST00000490786 PRKAR2AP13861 404 aaKnown RBP10.1□□□□□ -0.79
CAPN13-207ENST00000490786 MYCNP04198 464 aaPredicted RBP10.07□□□□□ -0.8
CAPN13-207ENST00000490786 CSRNP3Q8WYN3 585 aa10.06□□□□□ -0.8
CAPN13-207ENST00000490786 POTEIP0CG38 1075 aa10.01□□□□□ -0.81
CAPN13-207ENST00000490786 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
CAPN13-207ENST00000490786 POTEMA6NI47 508 aa9.92□□□□□ -0.82
CAPN13-207ENST00000490786 CLEC11AQ9Y240 323 aa9.91□□□□□ -0.82
CAPN13-207ENST00000490786 ZBTB22O15209 634 aa9.86□□□□□ -0.83
CAPN13-207ENST00000490786 POTEGQ6S5H5 508 aa9.86□□□□□ -0.83
CAPN13-207ENST00000490786 SPDYE1Q8NFV5 336 aaPredicted RBP9.86□□□□□ -0.83
CAPN13-207ENST00000490786 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
CAPN13-207ENST00000490786 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
CAPN13-207ENST00000490786 SPDYE2Q495Y8 402 aa9.82□□□□□ -0.84
CAPN13-207ENST00000490786 CHADLQ6NUI6 762 aa9.81□□□□□ -0.84
CAPN13-207ENST00000490786 OTUD5Q96G74 571 aa9.81□□□□□ -0.84
CAPN13-207ENST00000490786 PCDH10Q9P2E7 1040 aa9.78□□□□□ -0.84
CAPN13-207ENST00000490786 DCBLD2Q96PD2 775 aa9.77□□□□□ -0.85
CAPN13-207ENST00000490786 CLCN6P51797 869 aa9.75□□□□□ -0.85
CAPN13-207ENST00000490786 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
CAPN13-207ENST00000490786 CD44P16070 742 aaKnown RBP9.72□□□□□ -0.85
CAPN13-207ENST00000490786 POTEB2H3BUK9 544 aa9.67□□□□□ -0.86
CAPN13-207ENST00000490786 PRR29P0C7W0 189 aa9.61□□□□□ -0.87
CAPN13-207ENST00000490786 SSUH2Q9Y2M2 353 aa9.59□□□□□ -0.87
CAPN13-207ENST00000490786 FBLN2P98095 1184 aa9.58□□□□□ -0.88
CAPN13-207ENST00000490786 FARP1Q9Y4F1 1045 aaPredicted RBP9.58□□□□□ -0.88
CAPN13-207ENST00000490786 ZNF692Q9BU19 519 aaPredicted RBP9.57□□□□□ -0.88
CAPN13-207ENST00000490786 ZNF579Q8NAF0 562 aaKnown RBP9.52□□□□□ -0.89
CAPN13-207ENST00000490786 GALR2O43603 387 aaPredicted RBP9.49□□□□□ -0.89
CAPN13-207ENST00000490786 LCE2DQ5TA82 110 aaPredicted RBP9.49□□□□□ -0.89
CAPN13-207ENST00000490786 ZRANB1Q9UGI0 708 aa9.45□□□□□ -0.9
CAPN13-207ENST00000490786 FAM163AQ96GL9 167 aaPredicted RBP9.44□□□□□ -0.9
CAPN13-207ENST00000490786 MKRN4PQ13434 485 aaPredicted RBP9.42□□□□□ -0.9
CAPN13-207ENST00000490786 PABPN1Q86U42 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
CAPN13-207ENST00000490786 PELP1Q8IZL8 1130 aaKnown RBP9.39□□□□□ -0.91
CAPN13-207ENST00000490786 POTEJP0CG39 1038 aa9.38□□□□□ -0.91
CAPN13-207ENST00000490786 MAMSTRQ6ZN01 415 aa9.35□□□□□ -0.91
CAPN13-207ENST00000490786 ATXN8OSP0DMR3 200 aa9.34□□□□□ -0.91
CAPN13-207ENST00000490786 CDAN1Q8IWY9 1227 aa9.32□□□□□ -0.92
CAPN13-207ENST00000490786 METRNQ9UJH8 293 aa9.32□□□□□ -0.92
CAPN13-207ENST00000490786 C7P10643 843 aa9.26□□□□□ -0.93
CAPN13-207ENST00000490786 PHF12Q96QT6 1004 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms