RNA–Protein interactions for RNA: ENST00000487530.2

LYST-210, Transcript of lysosomal trafficking regulator, humanhuman

TSL 4

Gene LYST, Length 542 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-210ENST00000487530 AEBP2Q6ZN18 517 aaPredicted RBP15□□□□□ -0.01
LYST-210ENST00000487530 CHIC1Q5VXU3 224 aa14.73□□□□□ -0.05
LYST-210ENST00000487530 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
LYST-210ENST00000487530 SENP3Q9H4L4 574 aaPredicted RBP12.86□□□□□ -0.35
LYST-210ENST00000487530 POTEDQ86YR6 584 aa12.75□□□□□ -0.37
LYST-210ENST00000487530 PLPPR3Q6T4P5 718 aa12.05□□□□□ -0.48
LYST-210ENST00000487530 FOXD1Q16676 465 aa11.95□□□□□ -0.5
LYST-210ENST00000487530 ADRA2BP18089 450 aa11.46□□□□□ -0.57
LYST-210ENST00000487530 PPP6R1Q9UPN7 881 aa11.37□□□□□ -0.59
LYST-210ENST00000487530 MSH5O43196 834 aa11.33□□□□□ -0.6
LYST-210ENST00000487530 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
LYST-210ENST00000487530 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
LYST-210ENST00000487530 SCAF1Q9H7N4 1312 aaKnown RBP10.58□□□□□ -0.71
LYST-210ENST00000487530 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
LYST-210ENST00000487530 MAPK8IP2Q13387 824 aaPredicted RBP10.36□□□□□ -0.75
LYST-210ENST00000487530 KCNA4P22459 653 aa10.35□□□□□ -0.75
LYST-210ENST00000487530 CNKSR2Q8WXI2 1034 aa10.3□□□□□ -0.76
LYST-210ENST00000487530 CACNB1Q02641 598 aaPredicted RBP10.27□□□□□ -0.77
LYST-210ENST00000487530 DMRT2Q9Y5R5 561 aa10.21□□□□□ -0.77
LYST-210ENST00000487530 NPM3O75607 178 aaKnown RBP10.15□□□□□ -0.78
LYST-210ENST00000487530 RNF216Q9NWF9 866 aaPredicted RBP10.07□□□□□ -0.8
LYST-210ENST00000487530 DCAF8L1A6NGE4 600 aa10.01□□□□□ -0.81
LYST-210ENST00000487530 HOXD11P31277 338 aaPredicted RBP9.96□□□□□ -0.82
LYST-210ENST00000487530 SLC4A1APQ9BWU0 796 aaKnown RBP9.94□□□□□ -0.82
LYST-210ENST00000487530 POTEHQ6S545 545 aa9.78□□□□□ -0.84
LYST-210ENST00000487530 EHMT2Q96KQ7 1210 aa9.75□□□□□ -0.85
LYST-210ENST00000487530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.69□□□□□ -0.86
LYST-210ENST00000487530 DNAJC5BQ9UF47 199 aa9.66□□□□□ -0.86
LYST-210ENST00000487530 RNF39Q9H2S5 420 aa9.64□□□□□ -0.87
LYST-210ENST00000487530 FOXD4L1Q9NU39 408 aa9.57□□□□□ -0.88
LYST-210ENST00000487530 SLC4A2P04920 1241 aa9.51□□□□□ -0.89
LYST-210ENST00000487530 C1QBPQ07021 282 aaKnown RBP9.49□□□□□ -0.89
LYST-210ENST00000487530 ZBTB22O15209 634 aa9.45□□□□□ -0.9
LYST-210ENST00000487530 MYCNP04198 464 aaPredicted RBP9.45□□□□□ -0.9
LYST-210ENST00000487530 CSRNP3Q8WYN3 585 aa9.44□□□□□ -0.9
LYST-210ENST00000487530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.4□□□□□ -0.9
LYST-210ENST00000487530 HNRNPUL2Q1KMD3 747 aaKnown RBP9.4□□□□□ -0.9
LYST-210ENST00000487530 U3KPZ7 1027 aaPredicted RBP9.39□□□□□ -0.91
LYST-210ENST00000487530 APLP2Q06481 763 aa9.36□□□□□ -0.91
LYST-210ENST00000487530 SAMD1Q6SPF0 538 aaPredicted RBP9.34□□□□□ -0.91
LYST-210ENST00000487530 CAPN15O75808 1086 aa9.25□□□□□ -0.93
LYST-210ENST00000487530 TRHP20396 242 aaPredicted RBP9.2□□□□□ -0.94
LYST-210ENST00000487530 ATXN8OSP0DMR3 200 aa9.18□□□□□ -0.94
LYST-210ENST00000487530 ZNF219Q9P2Y4 722 aaPredicted RBP9.16□□□□□ -0.94
LYST-210ENST00000487530 SPINK5Q9NQ38 1064 aaPredicted RBP9.15□□□□□ -0.94
LYST-210ENST00000487530 ATF5Q9Y2D1 282 aaPredicted RBP9.08□□□□□ -0.96
LYST-210ENST00000487530 ABCB7O75027 752 aa9.04□□□□□ -0.96
LYST-210ENST00000487530 POLA2Q14181 598 aa8.97□□□□□ -0.97
LYST-210ENST00000487530 DSG3P32926 999 aa8.93□□□□□ -0.98
LYST-210ENST00000487530 FBLN2P98095 1184 aa8.9□□□□□ -0.98
LYST-210ENST00000487530 ZBTB12Q9Y330 459 aaPredicted RBP8.88□□□□□ -0.99
LYST-210ENST00000487530 SP7Q8TDD2 431 aaPredicted RBP8.7□□□□□ -1.02
LYST-210ENST00000487530 MKRN4PQ13434 485 aaPredicted RBP8.68□□□□□ -1.02
LYST-210ENST00000487530 FKBP8Q14318 412 aa8.68□□□□□ -1.02
LYST-210ENST00000487530 OSCARQ8IYS5 282 aa8.68□□□□□ -1.02
LYST-210ENST00000487530 RBM42Q9BTD8 480 aaKnown RBP8.63□□□□□ -1.03
LYST-210ENST00000487530 SPDYE4A6NLX3 237 aa8.62□□□□□ -1.03
LYST-210ENST00000487530 ZNF692Q9BU19 519 aaPredicted RBP8.6□□□□□ -1.03
LYST-210ENST00000487530 SPDYE2BA6NHP3 402 aa8.59□□□□□ -1.03
LYST-210ENST00000487530 SPDYE6P0CI01 402 aa8.59□□□□□ -1.03
LYST-210ENST00000487530 SPDYE2Q495Y8 402 aa8.59□□□□□ -1.03
LYST-210ENST00000487530 CHRDL2Q6WN34 429 aa8.48□□□□□ -1.05
LYST-210ENST00000487530 PABPN1Q86U42 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
LYST-210ENST00000487530 AKT1S1Q96B36 256 aa8.46□□□□□ -1.06
LYST-210ENST00000487530 SSUH2Q9Y2M2 353 aa8.43□□□□□ -1.06
LYST-210ENST00000487530 CLEC11AQ9Y240 323 aa8.41□□□□□ -1.06
LYST-210ENST00000487530 FBXO3Q9UK99 471 aa8.38□□□□□ -1.07
LYST-210ENST00000487530 REM2Q8IYK8 340 aaPredicted RBP8.37□□□□□ -1.07
LYST-210ENST00000487530 SPDYE1Q8NFV5 336 aaPredicted RBP8.37□□□□□ -1.07
LYST-210ENST00000487530 PLSCR2Q9NRY7 297 aa8.36□□□□□ -1.07
LYST-210ENST00000487530 STAG3Q9UJ98 1225 aa8.36□□□□□ -1.07
LYST-210ENST00000487530 PLEKHG5O94827 1062 aa8.3□□□□□ -1.08
LYST-210ENST00000487530 PRR29P0C7W0 189 aa8.29□□□□□ -1.08
LYST-210ENST00000487530 PROM2Q8N271 834 aa8.29□□□□□ -1.08
LYST-210ENST00000487530 PITPNM1O00562 1244 aa8.28□□□□□ -1.08
LYST-210ENST00000487530 PLCD3Q8N3E9 789 aa8.27□□□□□ -1.09
LYST-210ENST00000487530 MIER1Q8N108 512 aa8.24□□□□□ -1.09
LYST-210ENST00000487530 VASPP50552 380 aaPredicted RBP8.21□□□□□ -1.1
LYST-210ENST00000487530 KLHL34Q8N239 644 aa8.21□□□□□ -1.1
LYST-210ENST00000487530 PIP4P2Q8N4L2 257 aa8.17□□□□□ -1.1
LYST-210ENST00000487530 ZBTB47Q9UFB7 747 aaPredicted RBP8.15□□□□□ -1.1
LYST-210ENST00000487530 HAX1O00165 279 aa8.14□□□□□ -1.11
LYST-210ENST00000487530 LHX8Q68G74 356 aa8.14□□□□□ -1.11
LYST-210ENST00000487530 PRKAR2AP13861 404 aaKnown RBP8.12□□□□□ -1.11
LYST-210ENST00000487530 CHADLQ6NUI6 762 aa8.12□□□□□ -1.11
LYST-210ENST00000487530 FXR2P51116 673 aaKnown RBP eCLIP8.09□□□□□ -1.11
LYST-210ENST00000487530 NPM1P06748 294 aaKnown RBP eCLIP8.08□□□□□ -1.12
LYST-210ENST00000487530 EVX2Q03828 476 aa8.08□□□□□ -1.12
LYST-210ENST00000487530 CREBZFQ9NS37 354 aa8.07□□□□□ -1.12
LYST-210ENST00000487530 IFNLR1Q8IU57 520 aaPredicted RBP8.03□□□□□ -1.12
LYST-210ENST00000487530 SPOCK2Q92563 424 aa8.03□□□□□ -1.12
LYST-210ENST00000487530 FARP1Q9Y4F1 1045 aaPredicted RBP8.01□□□□□ -1.13
LYST-210ENST00000487530 PAK3O75914 559 aaPredicted RBP8□□□□□ -1.13
LYST-210ENST00000487530 CIZ1Q9ULV3 898 aaPredicted RBP7.99□□□□□ -1.13
LYST-210ENST00000487530 FAM212AQ96EL1 285 aa7.97□□□□□ -1.13
LYST-210ENST00000487530 DCAF8Q5TAQ9 597 aa7.96□□□□□ -1.14
LYST-210ENST00000487530 AMER1Q5JTC6 1135 aaPredicted RBP7.95□□□□□ -1.14
LYST-210ENST00000487530 TSPYL2Q9H2G4 693 aaPredicted RBP7.94□□□□□ -1.14
LYST-210ENST00000487530 CD44P16070 742 aaKnown RBP7.91□□□□□ -1.14
LYST-210ENST00000487530 GSE1Q14687 1217 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms