RNA–Protein interactions for RNA: ENST00000486920.1

GBE1-204, Transcript of 1,4-alpha-glucan branching enzyme 1, humanhuman

TSL 3

Gene GBE1, Length 576 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBE1-204ENST00000486920 AEBP2Q6ZN18 517 aaPredicted RBP23.41■■□□□ 1.34
GBE1-204ENST00000486920 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
GBE1-204ENST00000486920 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
GBE1-204ENST00000486920 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
GBE1-204ENST00000486920 FOXD1Q16676 465 aa18.65■□□□□ 0.58
GBE1-204ENST00000486920 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
GBE1-204ENST00000486920 MSH5O43196 834 aa17.41■□□□□ 0.38
GBE1-204ENST00000486920 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
GBE1-204ENST00000486920 PPP6R1Q9UPN7 881 aa17.2■□□□□ 0.34
GBE1-204ENST00000486920 ADRA2BP18089 450 aa17.04■□□□□ 0.32
GBE1-204ENST00000486920 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
GBE1-204ENST00000486920 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
GBE1-204ENST00000486920 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
GBE1-204ENST00000486920 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
GBE1-204ENST00000486920 CACNB1Q02641 598 aaPredicted RBP15.25■□□□□ 0.03
GBE1-204ENST00000486920 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
GBE1-204ENST00000486920 DCAF8L1A6NGE4 600 aa14.95□□□□□ -0.02
GBE1-204ENST00000486920 HOXD11P31277 338 aaPredicted RBP14.95□□□□□ -0.02
GBE1-204ENST00000486920 PPP4R3CPQ6ZMV5 832 aa14.9□□□□□ -0.02
GBE1-204ENST00000486920 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
GBE1-204ENST00000486920 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
GBE1-204ENST00000486920 C1QBPQ07021 282 aaKnown RBP14.59□□□□□ -0.07
GBE1-204ENST00000486920 DNAJC5BQ9UF47 199 aa14.41□□□□□ -0.1
GBE1-204ENST00000486920 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
GBE1-204ENST00000486920 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
GBE1-204ENST00000486920 NCBP3Q53F19 620 aaKnown RBP14□□□□□ -0.17
GBE1-204ENST00000486920 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
GBE1-204ENST00000486920 POTEHQ6S545 545 aa13.91□□□□□ -0.18
GBE1-204ENST00000486920 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
GBE1-204ENST00000486920 DSG3P32926 999 aa13.87□□□□□ -0.19
GBE1-204ENST00000486920 CAPN15O75808 1086 aa13.72□□□□□ -0.21
GBE1-204ENST00000486920 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
GBE1-204ENST00000486920 ABCB7O75027 752 aa13.47□□□□□ -0.25
GBE1-204ENST00000486920 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
GBE1-204ENST00000486920 KCNA4P22459 653 aa13.41□□□□□ -0.26
GBE1-204ENST00000486920 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
GBE1-204ENST00000486920 APLP2Q06481 763 aa13.14□□□□□ -0.31
GBE1-204ENST00000486920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
GBE1-204ENST00000486920 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
GBE1-204ENST00000486920 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
GBE1-204ENST00000486920 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
GBE1-204ENST00000486920 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
GBE1-204ENST00000486920 POLA2Q14181 598 aa13□□□□□ -0.33
GBE1-204ENST00000486920 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
GBE1-204ENST00000486920 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
GBE1-204ENST00000486920 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
GBE1-204ENST00000486920 AKT1S1Q96B36 256 aa12.73□□□□□ -0.37
GBE1-204ENST00000486920 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
GBE1-204ENST00000486920 REM2Q8IYK8 340 aaPredicted RBP12.69□□□□□ -0.38
GBE1-204ENST00000486920 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
GBE1-204ENST00000486920 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
GBE1-204ENST00000486920 EVX2Q03828 476 aa12.57□□□□□ -0.4
GBE1-204ENST00000486920 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
GBE1-204ENST00000486920 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
GBE1-204ENST00000486920 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
GBE1-204ENST00000486920 HAX1O00165 279 aa12.49□□□□□ -0.41
GBE1-204ENST00000486920 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
GBE1-204ENST00000486920 ZBTB22O15209 634 aa12.43□□□□□ -0.42
GBE1-204ENST00000486920 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
GBE1-204ENST00000486920 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
GBE1-204ENST00000486920 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
GBE1-204ENST00000486920 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
GBE1-204ENST00000486920 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
GBE1-204ENST00000486920 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
GBE1-204ENST00000486920 ATXN8OSP0DMR3 200 aa12.13□□□□□ -0.47
GBE1-204ENST00000486920 GABBR2O75899 941 aa12.1□□□□□ -0.47
GBE1-204ENST00000486920 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
GBE1-204ENST00000486920 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
GBE1-204ENST00000486920 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
GBE1-204ENST00000486920 CHADLQ6NUI6 762 aa12.05□□□□□ -0.48
GBE1-204ENST00000486920 FBLN2P98095 1184 aa12.04□□□□□ -0.48
GBE1-204ENST00000486920 LHX8Q68G74 356 aa12□□□□□ -0.49
GBE1-204ENST00000486920 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
GBE1-204ENST00000486920 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
GBE1-204ENST00000486920 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
GBE1-204ENST00000486920 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
GBE1-204ENST00000486920 CD44P16070 742 aaKnown RBP11.76□□□□□ -0.53
GBE1-204ENST00000486920 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
GBE1-204ENST00000486920 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
GBE1-204ENST00000486920 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
GBE1-204ENST00000486920 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
GBE1-204ENST00000486920 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
GBE1-204ENST00000486920 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
GBE1-204ENST00000486920 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
GBE1-204ENST00000486920 DCBLD2Q96PD2 775 aa11.53□□□□□ -0.56
GBE1-204ENST00000486920 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.57
GBE1-204ENST00000486920 CLCN6P51797 869 aa11.51□□□□□ -0.57
GBE1-204ENST00000486920 PELP1Q8IZL8 1130 aaKnown RBP11.45□□□□□ -0.58
GBE1-204ENST00000486920 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
GBE1-204ENST00000486920 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
GBE1-204ENST00000486920 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
GBE1-204ENST00000486920 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
GBE1-204ENST00000486920 POTEMA6NI47 508 aa11.33□□□□□ -0.6
GBE1-204ENST00000486920 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
GBE1-204ENST00000486920 LCE2DQ5TA82 110 aaPredicted RBP11.27□□□□□ -0.61
GBE1-204ENST00000486920 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
GBE1-204ENST00000486920 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
GBE1-204ENST00000486920 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
GBE1-204ENST00000486920 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
GBE1-204ENST00000486920 ATMINO43313 823 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms