RNA–Protein interactions for RNA: ENST00000486679.2

MYCBP2-208, Transcript of MYC binding protein 2, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene MYCBP2, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCBP2-208ENST00000486679 AEBP2Q6ZN18 517 aaPredicted RBP25.96■■□□□ 1.75
MYCBP2-208ENST00000486679 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
MYCBP2-208ENST00000486679 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
MYCBP2-208ENST00000486679 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
MYCBP2-208ENST00000486679 FOXD1Q16676 465 aa20.54■□□□□ 0.88
MYCBP2-208ENST00000486679 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
MYCBP2-208ENST00000486679 ADRA2BP18089 450 aa19.61■□□□□ 0.73
MYCBP2-208ENST00000486679 PPP6R1Q9UPN7 881 aa19.58■□□□□ 0.72
MYCBP2-208ENST00000486679 PIAS4Q8N2W9 510 aaPredicted RBP19.41■□□□□ 0.7
MYCBP2-208ENST00000486679 MSH5O43196 834 aa19.07■□□□□ 0.64
MYCBP2-208ENST00000486679 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
MYCBP2-208ENST00000486679 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
MYCBP2-208ENST00000486679 MAPK8IP2Q13387 824 aaPredicted RBP17.85■□□□□ 0.45
MYCBP2-208ENST00000486679 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
MYCBP2-208ENST00000486679 DMRT2Q9Y5R5 561 aa17.59■□□□□ 0.41
MYCBP2-208ENST00000486679 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
MYCBP2-208ENST00000486679 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
MYCBP2-208ENST00000486679 KCNA4P22459 653 aa17.26■□□□□ 0.35
MYCBP2-208ENST00000486679 RNF216Q9NWF9 866 aaPredicted RBP17.16■□□□□ 0.34
MYCBP2-208ENST00000486679 NPM3O75607 178 aaKnown RBP17.12■□□□□ 0.33
MYCBP2-208ENST00000486679 HOXD11P31277 338 aaPredicted RBP17.11■□□□□ 0.33
MYCBP2-208ENST00000486679 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
MYCBP2-208ENST00000486679 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
MYCBP2-208ENST00000486679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.23
MYCBP2-208ENST00000486679 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
MYCBP2-208ENST00000486679 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
MYCBP2-208ENST00000486679 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
MYCBP2-208ENST00000486679 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
MYCBP2-208ENST00000486679 C1QBPQ07021 282 aaKnown RBP16.09■□□□□ 0.17
MYCBP2-208ENST00000486679 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
MYCBP2-208ENST00000486679 FOXD4L1Q9NU39 408 aa15.96■□□□□ 0.15
MYCBP2-208ENST00000486679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
MYCBP2-208ENST00000486679 MYCNP04198 464 aaPredicted RBP15.86■□□□□ 0.13
MYCBP2-208ENST00000486679 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
MYCBP2-208ENST00000486679 ZBTB22O15209 634 aa15.83■□□□□ 0.12
MYCBP2-208ENST00000486679 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
MYCBP2-208ENST00000486679 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
MYCBP2-208ENST00000486679 APLP2Q06481 763 aa15.77■□□□□ 0.12
MYCBP2-208ENST00000486679 CAPN15O75808 1086 aa15.76■□□□□ 0.11
MYCBP2-208ENST00000486679 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
MYCBP2-208ENST00000486679 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
MYCBP2-208ENST00000486679 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
MYCBP2-208ENST00000486679 ZNF219Q9P2Y4 722 aaPredicted RBP15.56■□□□□ 0.08
MYCBP2-208ENST00000486679 ABCB7O75027 752 aa15.43■□□□□ 0.06
MYCBP2-208ENST00000486679 DSG3P32926 999 aa15.42■□□□□ 0.06
MYCBP2-208ENST00000486679 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
MYCBP2-208ENST00000486679 ATXN8OSP0DMR3 200 aa15.37■□□□□ 0.05
MYCBP2-208ENST00000486679 POLA2Q14181 598 aa15.27■□□□□ 0.04
MYCBP2-208ENST00000486679 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
MYCBP2-208ENST00000486679 FBLN2P98095 1184 aa14.89□□□□□ -0.03
MYCBP2-208ENST00000486679 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
MYCBP2-208ENST00000486679 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
MYCBP2-208ENST00000486679 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
MYCBP2-208ENST00000486679 SPDYE2BA6NHP3 402 aa14.54□□□□□ -0.08
MYCBP2-208ENST00000486679 SPDYE6P0CI01 402 aa14.54□□□□□ -0.08
MYCBP2-208ENST00000486679 SPDYE2Q495Y8 402 aa14.54□□□□□ -0.08
MYCBP2-208ENST00000486679 ZNF692Q9BU19 519 aaPredicted RBP14.52□□□□□ -0.09
MYCBP2-208ENST00000486679 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
MYCBP2-208ENST00000486679 SPDYE4A6NLX3 237 aa14.37□□□□□ -0.11
MYCBP2-208ENST00000486679 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
MYCBP2-208ENST00000486679 SSUH2Q9Y2M2 353 aa14.35□□□□□ -0.11
MYCBP2-208ENST00000486679 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
MYCBP2-208ENST00000486679 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
MYCBP2-208ENST00000486679 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
MYCBP2-208ENST00000486679 PITPNM1O00562 1244 aa14.21□□□□□ -0.13
MYCBP2-208ENST00000486679 FKBP8Q14318 412 aa14.2□□□□□ -0.14
MYCBP2-208ENST00000486679 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
MYCBP2-208ENST00000486679 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
MYCBP2-208ENST00000486679 POTEHQ6S545 545 aa14.04□□□□□ -0.16
MYCBP2-208ENST00000486679 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
MYCBP2-208ENST00000486679 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
MYCBP2-208ENST00000486679 PROM2Q8N271 834 aa13.94□□□□□ -0.18
MYCBP2-208ENST00000486679 FXR2P51116 673 aaKnown RBP eCLIP13.93□□□□□ -0.18
MYCBP2-208ENST00000486679 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
MYCBP2-208ENST00000486679 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
MYCBP2-208ENST00000486679 FBXO3Q9UK99 471 aa13.74□□□□□ -0.21
MYCBP2-208ENST00000486679 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
MYCBP2-208ENST00000486679 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
MYCBP2-208ENST00000486679 MIER1Q8N108 512 aa13.7□□□□□ -0.22
MYCBP2-208ENST00000486679 HAX1O00165 279 aa13.69□□□□□ -0.22
MYCBP2-208ENST00000486679 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
MYCBP2-208ENST00000486679 FARP1Q9Y4F1 1045 aaPredicted RBP13.66□□□□□ -0.22
MYCBP2-208ENST00000486679 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
MYCBP2-208ENST00000486679 VASPP50552 380 aaPredicted RBP13.53□□□□□ -0.24
MYCBP2-208ENST00000486679 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
MYCBP2-208ENST00000486679 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
MYCBP2-208ENST00000486679 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
MYCBP2-208ENST00000486679 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
MYCBP2-208ENST00000486679 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
MYCBP2-208ENST00000486679 PAK3O75914 559 aaPredicted RBP13.44□□□□□ -0.26
MYCBP2-208ENST00000486679 EVX2Q03828 476 aa13.43□□□□□ -0.26
MYCBP2-208ENST00000486679 ZRANB1Q9UGI0 708 aa13.39□□□□□ -0.27
MYCBP2-208ENST00000486679 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
MYCBP2-208ENST00000486679 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
MYCBP2-208ENST00000486679 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
MYCBP2-208ENST00000486679 RASEFQ8IZ41 740 aa13.29□□□□□ -0.28
MYCBP2-208ENST00000486679 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
MYCBP2-208ENST00000486679 NUBP1P53384 320 aa13.25□□□□□ -0.29
MYCBP2-208ENST00000486679 DCAF8Q5TAQ9 597 aa13.24□□□□□ -0.29
MYCBP2-208ENST00000486679 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms