RNA–Protein interactions for RNA: ENST00000485696.1

CLDN12-211, Transcript of claudin 12, humanhuman

TSL 3

Gene CLDN12, Length 309 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-211ENST00000485696 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
CLDN12-211ENST00000485696 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
CLDN12-211ENST00000485696 PHF23Q9BUL5 403 aaPredicted RBP18.3■□□□□ 0.52
CLDN12-211ENST00000485696 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
CLDN12-211ENST00000485696 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
CLDN12-211ENST00000485696 FOXD1Q16676 465 aa16.74■□□□□ 0.27
CLDN12-211ENST00000485696 ADRA2BP18089 450 aa16.11■□□□□ 0.17
CLDN12-211ENST00000485696 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
CLDN12-211ENST00000485696 PIAS4Q8N2W9 510 aaPredicted RBP15.83■□□□□ 0.12
CLDN12-211ENST00000485696 MSH5O43196 834 aa15.49■□□□□ 0.07
CLDN12-211ENST00000485696 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
CLDN12-211ENST00000485696 SCAF1Q9H7N4 1312 aaKnown RBP14.83□□□□□ -0.04
CLDN12-211ENST00000485696 KCNA4P22459 653 aa14.63□□□□□ -0.07
CLDN12-211ENST00000485696 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
CLDN12-211ENST00000485696 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
CLDN12-211ENST00000485696 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
CLDN12-211ENST00000485696 DMRT2Q9Y5R5 561 aa14.45□□□□□ -0.1
CLDN12-211ENST00000485696 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
CLDN12-211ENST00000485696 RNF216Q9NWF9 866 aaPredicted RBP14.24□□□□□ -0.13
CLDN12-211ENST00000485696 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
CLDN12-211ENST00000485696 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
CLDN12-211ENST00000485696 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
CLDN12-211ENST00000485696 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
CLDN12-211ENST00000485696 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
CLDN12-211ENST00000485696 EHMT2Q96KQ7 1210 aa13.59□□□□□ -0.23
CLDN12-211ENST00000485696 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
CLDN12-211ENST00000485696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLDN12-211ENST00000485696 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
CLDN12-211ENST00000485696 ZBTB22O15209 634 aa13.45□□□□□ -0.26
CLDN12-211ENST00000485696 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
CLDN12-211ENST00000485696 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
CLDN12-211ENST00000485696 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
CLDN12-211ENST00000485696 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
CLDN12-211ENST00000485696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
CLDN12-211ENST00000485696 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
CLDN12-211ENST00000485696 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
CLDN12-211ENST00000485696 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
CLDN12-211ENST00000485696 APLP2Q06481 763 aa13.07□□□□□ -0.32
CLDN12-211ENST00000485696 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
CLDN12-211ENST00000485696 CACNB1Q02641 598 aaPredicted RBP12.85□□□□□ -0.35
CLDN12-211ENST00000485696 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
CLDN12-211ENST00000485696 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
CLDN12-211ENST00000485696 ZNF219Q9P2Y4 722 aaPredicted RBP12.84□□□□□ -0.35
CLDN12-211ENST00000485696 CAPN15O75808 1086 aa12.83□□□□□ -0.36
CLDN12-211ENST00000485696 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
CLDN12-211ENST00000485696 DSG3P32926 999 aa12.6□□□□□ -0.39
CLDN12-211ENST00000485696 ABCB7O75027 752 aa12.57□□□□□ -0.4
CLDN12-211ENST00000485696 POLA2Q14181 598 aa12.57□□□□□ -0.4
CLDN12-211ENST00000485696 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
CLDN12-211ENST00000485696 FBLN2P98095 1184 aa12.41□□□□□ -0.42
CLDN12-211ENST00000485696 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
CLDN12-211ENST00000485696 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
CLDN12-211ENST00000485696 FKBP8Q14318 412 aa12.14□□□□□ -0.47
CLDN12-211ENST00000485696 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
CLDN12-211ENST00000485696 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
CLDN12-211ENST00000485696 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
CLDN12-211ENST00000485696 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
CLDN12-211ENST00000485696 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
CLDN12-211ENST00000485696 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
CLDN12-211ENST00000485696 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
CLDN12-211ENST00000485696 PROM2Q8N271 834 aa11.94□□□□□ -0.5
CLDN12-211ENST00000485696 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
CLDN12-211ENST00000485696 PABPN1Q86U42 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLDN12-211ENST00000485696 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
CLDN12-211ENST00000485696 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
CLDN12-211ENST00000485696 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
CLDN12-211ENST00000485696 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
CLDN12-211ENST00000485696 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
CLDN12-211ENST00000485696 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
CLDN12-211ENST00000485696 VASPP50552 380 aaPredicted RBP11.57□□□□□ -0.56
CLDN12-211ENST00000485696 PRR29P0C7W0 189 aa11.54□□□□□ -0.56
CLDN12-211ENST00000485696 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
CLDN12-211ENST00000485696 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
CLDN12-211ENST00000485696 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
CLDN12-211ENST00000485696 MIER1Q8N108 512 aa11.45□□□□□ -0.58
CLDN12-211ENST00000485696 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLDN12-211ENST00000485696 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
CLDN12-211ENST00000485696 CREBZFQ9NS37 354 aa11.39□□□□□ -0.59
CLDN12-211ENST00000485696 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
CLDN12-211ENST00000485696 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
CLDN12-211ENST00000485696 PRKAR2AP13861 404 aaKnown RBP11.34□□□□□ -0.59
CLDN12-211ENST00000485696 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
CLDN12-211ENST00000485696 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
CLDN12-211ENST00000485696 MNX1P50219 401 aaPredicted RBP11.28□□□□□ -0.6
CLDN12-211ENST00000485696 SPOCK2Q92563 424 aa11.28□□□□□ -0.6
CLDN12-211ENST00000485696 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLDN12-211ENST00000485696 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
CLDN12-211ENST00000485696 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
CLDN12-211ENST00000485696 NUBP1P53384 320 aa11.16□□□□□ -0.62
CLDN12-211ENST00000485696 FAM212AQ96EL1 285 aa11.12□□□□□ -0.63
CLDN12-211ENST00000485696 GSE1Q14687 1217 aa11.1□□□□□ -0.63
CLDN12-211ENST00000485696 RASEFQ8IZ41 740 aa11.1□□□□□ -0.63
CLDN12-211ENST00000485696 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
CLDN12-211ENST00000485696 POTEHQ6S545 545 aa11.08□□□□□ -0.64
CLDN12-211ENST00000485696 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
CLDN12-211ENST00000485696 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
CLDN12-211ENST00000485696 DCAF8Q5TAQ9 597 aa11.04□□□□□ -0.64
CLDN12-211ENST00000485696 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
CLDN12-211ENST00000485696 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
CLDN12-211ENST00000485696 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms