RNA–Protein interactions for RNA: ENST00000485478.1

LRRC17-204, Transcript of leucine rich repeat containing 17, humanhuman

TSL 3

Gene LRRC17, Length 809 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC17-204ENST00000485478 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
LRRC17-204ENST00000485478 CHIC1Q5VXU3 224 aa26.83■■□□□ 1.89
LRRC17-204ENST00000485478 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
LRRC17-204ENST00000485478 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
LRRC17-204ENST00000485478 FOXD1Q16676 465 aa21.84■■□□□ 1.09
LRRC17-204ENST00000485478 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
LRRC17-204ENST00000485478 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
LRRC17-204ENST00000485478 ADRA2BP18089 450 aa20.85■□□□□ 0.93
LRRC17-204ENST00000485478 PIAS4Q8N2W9 510 aaPredicted RBP20.54■□□□□ 0.88
LRRC17-204ENST00000485478 MSH5O43196 834 aa20.17■□□□□ 0.82
LRRC17-204ENST00000485478 PPP4R3CPQ6ZMV5 832 aa19.1■□□□□ 0.65
LRRC17-204ENST00000485478 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
LRRC17-204ENST00000485478 MAPK8IP2Q13387 824 aaPredicted RBP18.99■□□□□ 0.63
LRRC17-204ENST00000485478 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
LRRC17-204ENST00000485478 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
LRRC17-204ENST00000485478 CNKSR2Q8WXI2 1034 aa18.6■□□□□ 0.57
LRRC17-204ENST00000485478 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.56
LRRC17-204ENST00000485478 KCNA4P22459 653 aa18.47■□□□□ 0.55
LRRC17-204ENST00000485478 NPM3O75607 178 aaKnown RBP18.29■□□□□ 0.52
LRRC17-204ENST00000485478 RNF216Q9NWF9 866 aaPredicted RBP18.28■□□□□ 0.52
LRRC17-204ENST00000485478 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
LRRC17-204ENST00000485478 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
LRRC17-204ENST00000485478 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
LRRC17-204ENST00000485478 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
LRRC17-204ENST00000485478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.37
LRRC17-204ENST00000485478 SLC4A2P04920 1241 aa17.33■□□□□ 0.36
LRRC17-204ENST00000485478 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
LRRC17-204ENST00000485478 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
LRRC17-204ENST00000485478 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
LRRC17-204ENST00000485478 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
LRRC17-204ENST00000485478 ZBTB22O15209 634 aa17.01■□□□□ 0.31
LRRC17-204ENST00000485478 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
LRRC17-204ENST00000485478 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
LRRC17-204ENST00000485478 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
LRRC17-204ENST00000485478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
LRRC17-204ENST00000485478 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
LRRC17-204ENST00000485478 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
LRRC17-204ENST00000485478 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
LRRC17-204ENST00000485478 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
LRRC17-204ENST00000485478 APLP2Q06481 763 aa16.64■□□□□ 0.25
LRRC17-204ENST00000485478 CAPN15O75808 1086 aa16.61■□□□□ 0.25
LRRC17-204ENST00000485478 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
LRRC17-204ENST00000485478 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
LRRC17-204ENST00000485478 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
LRRC17-204ENST00000485478 ATXN8OSP0DMR3 200 aa16.44■□□□□ 0.22
LRRC17-204ENST00000485478 DSG3P32926 999 aa16.4■□□□□ 0.22
LRRC17-204ENST00000485478 ABCB7O75027 752 aa16.31■□□□□ 0.2
LRRC17-204ENST00000485478 POLA2Q14181 598 aa16.2■□□□□ 0.18
LRRC17-204ENST00000485478 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
LRRC17-204ENST00000485478 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
LRRC17-204ENST00000485478 FBLN2P98095 1184 aa15.74■□□□□ 0.11
LRRC17-204ENST00000485478 OSCARQ8IYS5 282 aa15.66■□□□□ 0.1
LRRC17-204ENST00000485478 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
LRRC17-204ENST00000485478 SPDYE2BA6NHP3 402 aa15.46■□□□□ 0.07
LRRC17-204ENST00000485478 SPDYE6P0CI01 402 aa15.46■□□□□ 0.07
LRRC17-204ENST00000485478 SPDYE2Q495Y8 402 aa15.46■□□□□ 0.07
LRRC17-204ENST00000485478 AKT1S1Q96B36 256 aa15.38■□□□□ 0.05
LRRC17-204ENST00000485478 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
LRRC17-204ENST00000485478 SSUH2Q9Y2M2 353 aa15.33■□□□□ 0.04
LRRC17-204ENST00000485478 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
LRRC17-204ENST00000485478 REM2Q8IYK8 340 aaPredicted RBP15.25■□□□□ 0.03
LRRC17-204ENST00000485478 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
LRRC17-204ENST00000485478 FKBP8Q14318 412 aa15.13■□□□□ 0.01
LRRC17-204ENST00000485478 PITPNM1O00562 1244 aa15.08■□□□□ 0
LRRC17-204ENST00000485478 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
LRRC17-204ENST00000485478 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
LRRC17-204ENST00000485478 PROM2Q8N271 834 aa15.02■□□□□ -0
LRRC17-204ENST00000485478 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
LRRC17-204ENST00000485478 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
LRRC17-204ENST00000485478 FXR2P51116 673 aaKnown RBP eCLIP14.83□□□□□ -0.04
LRRC17-204ENST00000485478 PIP4P2Q8N4L2 257 aa14.83□□□□□ -0.04
LRRC17-204ENST00000485478 PRR29P0C7W0 189 aa14.82□□□□□ -0.04
LRRC17-204ENST00000485478 POTEHQ6S545 545 aa14.78□□□□□ -0.04
LRRC17-204ENST00000485478 PRKAR2AP13861 404 aaKnown RBP14.69□□□□□ -0.06
LRRC17-204ENST00000485478 CHADLQ6NUI6 762 aa14.67□□□□□ -0.06
LRRC17-204ENST00000485478 CREBZFQ9NS37 354 aa14.62□□□□□ -0.07
LRRC17-204ENST00000485478 FBXO3Q9UK99 471 aa14.61□□□□□ -0.07
LRRC17-204ENST00000485478 MIER1Q8N108 512 aa14.51□□□□□ -0.09
LRRC17-204ENST00000485478 FARP1Q9Y4F1 1045 aaPredicted RBP14.49□□□□□ -0.09
LRRC17-204ENST00000485478 PLCD3Q8N3E9 789 aa14.46□□□□□ -0.09
LRRC17-204ENST00000485478 MNX1P50219 401 aaPredicted RBP14.45□□□□□ -0.1
LRRC17-204ENST00000485478 VASPP50552 380 aaPredicted RBP14.45□□□□□ -0.1
LRRC17-204ENST00000485478 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
LRRC17-204ENST00000485478 HAX1O00165 279 aa14.38□□□□□ -0.11
LRRC17-204ENST00000485478 C19orf67A6NJJ6 358 aa14.33□□□□□ -0.12
LRRC17-204ENST00000485478 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
LRRC17-204ENST00000485478 EVX2Q03828 476 aa14.29□□□□□ -0.12
LRRC17-204ENST00000485478 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
LRRC17-204ENST00000485478 CD44P16070 742 aaKnown RBP14.25□□□□□ -0.13
LRRC17-204ENST00000485478 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
LRRC17-204ENST00000485478 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
LRRC17-204ENST00000485478 NUBP1P53384 320 aa14.18□□□□□ -0.14
LRRC17-204ENST00000485478 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
LRRC17-204ENST00000485478 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
LRRC17-204ENST00000485478 SP7Q8TDD2 431 aaPredicted RBP14.13□□□□□ -0.15
LRRC17-204ENST00000485478 PAK3O75914 559 aaPredicted RBP14.12□□□□□ -0.15
LRRC17-204ENST00000485478 TSPYL2Q9H2G4 693 aaPredicted RBP14.12□□□□□ -0.15
LRRC17-204ENST00000485478 SPOCK2Q92563 424 aa14.09□□□□□ -0.15
LRRC17-204ENST00000485478 ZNF579Q8NAF0 562 aaKnown RBP14.06□□□□□ -0.16
LRRC17-204ENST00000485478 FAM212AQ96EL1 285 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms