RNA–Protein interactions for RNA: ENST00000484560.1

PLSCR1-212, Transcript of phospholipid scramblase 1, humanhuman

TSL 5

Gene PLSCR1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-212ENST00000484560 AEBP2Q6ZN18 517 aaPredicted RBP36.97■■■■□ 3.51
PLSCR1-212ENST00000484560 CHIC1Q5VXU3 224 aa35.95■■■■□ 3.35
PLSCR1-212ENST00000484560 PHF23Q9BUL5 403 aaPredicted RBP31.55■■■□□ 2.64
PLSCR1-212ENST00000484560 SENP3Q9H4L4 574 aaPredicted RBP31.49■■■□□ 2.63
PLSCR1-212ENST00000484560 FOXD1Q16676 465 aa29.19■■■□□ 2.26
PLSCR1-212ENST00000484560 PLPPR3Q6T4P5 718 aa29.09■■■□□ 2.25
PLSCR1-212ENST00000484560 PPP6R1Q9UPN7 881 aa27.88■■■□□ 2.05
PLSCR1-212ENST00000484560 ADRA2BP18089 450 aa27.82■■■□□ 2.04
PLSCR1-212ENST00000484560 PIAS4Q8N2W9 510 aaPredicted RBP27.45■■□□□ 1.98
PLSCR1-212ENST00000484560 MSH5O43196 834 aa27.08■■□□□ 1.93
PLSCR1-212ENST00000484560 SCAF1Q9H7N4 1312 aaKnown RBP25.58■■□□□ 1.69
PLSCR1-212ENST00000484560 PPP4R3CPQ6ZMV5 832 aa25.57■■□□□ 1.68
PLSCR1-212ENST00000484560 MAPK8IP2Q13387 824 aaPredicted RBP25.3■■□□□ 1.64
PLSCR1-212ENST00000484560 DMRT2Q9Y5R5 561 aa25.09■■□□□ 1.61
PLSCR1-212ENST00000484560 POTEDQ86YR6 584 aa25■■□□□ 1.59
PLSCR1-212ENST00000484560 CNKSR2Q8WXI2 1034 aa24.95■■□□□ 1.58
PLSCR1-212ENST00000484560 NCBP3Q53F19 620 aaKnown RBP24.88■■□□□ 1.57
PLSCR1-212ENST00000484560 KCNA4P22459 653 aa24.67■■□□□ 1.54
PLSCR1-212ENST00000484560 RNF216Q9NWF9 866 aaPredicted RBP24.54■■□□□ 1.52
PLSCR1-212ENST00000484560 HOXD11P31277 338 aaPredicted RBP24.51■■□□□ 1.51
PLSCR1-212ENST00000484560 NPM3O75607 178 aaKnown RBP24.46■■□□□ 1.51
PLSCR1-212ENST00000484560 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
PLSCR1-212ENST00000484560 DCAF8L1A6NGE4 600 aa23.87■■□□□ 1.41
PLSCR1-212ENST00000484560 SLC4A1APQ9BWU0 796 aaKnown RBP23.46■■□□□ 1.35
PLSCR1-212ENST00000484560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.26■■□□□ 1.31
PLSCR1-212ENST00000484560 SLC4A2P04920 1241 aa23.16■■□□□ 1.3
PLSCR1-212ENST00000484560 RNF39Q9H2S5 420 aa23.16■■□□□ 1.3
PLSCR1-212ENST00000484560 C1QBPQ07021 282 aaKnown RBP22.91■■□□□ 1.26
PLSCR1-212ENST00000484560 U3KPZ7 1027 aaPredicted RBP22.89■■□□□ 1.25
PLSCR1-212ENST00000484560 FOXD4L1Q9NU39 408 aa22.82■■□□□ 1.24
PLSCR1-212ENST00000484560 ZBTB22O15209 634 aa22.69■■□□□ 1.22
PLSCR1-212ENST00000484560 CACNB1Q02641 598 aaPredicted RBP22.66■■□□□ 1.22
PLSCR1-212ENST00000484560 MYCNP04198 464 aaPredicted RBP22.64■■□□□ 1.21
PLSCR1-212ENST00000484560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
PLSCR1-212ENST00000484560 HNRNPUL2Q1KMD3 747 aaKnown RBP22.6■■□□□ 1.21
PLSCR1-212ENST00000484560 SAMD1Q6SPF0 538 aaPredicted RBP22.48■■□□□ 1.19
PLSCR1-212ENST00000484560 APLP2Q06481 763 aa22.42■■□□□ 1.18
PLSCR1-212ENST00000484560 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
PLSCR1-212ENST00000484560 CSRNP3Q8WYN3 585 aa22.39■■□□□ 1.17
PLSCR1-212ENST00000484560 SPINK5Q9NQ38 1064 aaPredicted RBP22.27■■□□□ 1.16
PLSCR1-212ENST00000484560 CAPN15O75808 1086 aa22.19■■□□□ 1.14
PLSCR1-212ENST00000484560 ATXN8OSP0DMR3 200 aa22.13■■□□□ 1.13
PLSCR1-212ENST00000484560 ZNF219Q9P2Y4 722 aaPredicted RBP22.1■■□□□ 1.13
PLSCR1-212ENST00000484560 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
PLSCR1-212ENST00000484560 ATF5Q9Y2D1 282 aaPredicted RBP21.97■■□□□ 1.11
PLSCR1-212ENST00000484560 DSG3P32926 999 aa21.94■■□□□ 1.1
PLSCR1-212ENST00000484560 ABCB7O75027 752 aa21.7■■□□□ 1.06
PLSCR1-212ENST00000484560 POLA2Q14181 598 aa21.65■■□□□ 1.06
PLSCR1-212ENST00000484560 ZBTB12Q9Y330 459 aaPredicted RBP21.36■■□□□ 1.01
PLSCR1-212ENST00000484560 FBLN2P98095 1184 aa21.13■□□□□ 0.97
PLSCR1-212ENST00000484560 MKRN4PQ13434 485 aaPredicted RBP21.05■□□□□ 0.96
PLSCR1-212ENST00000484560 RBM42Q9BTD8 480 aaKnown RBP20.96■□□□□ 0.95
PLSCR1-212ENST00000484560 OSCARQ8IYS5 282 aa20.89■□□□□ 0.93
PLSCR1-212ENST00000484560 SPDYE2BA6NHP3 402 aa20.75■□□□□ 0.91
PLSCR1-212ENST00000484560 SPDYE6P0CI01 402 aa20.75■□□□□ 0.91
PLSCR1-212ENST00000484560 SPDYE2Q495Y8 402 aa20.75■□□□□ 0.91
PLSCR1-212ENST00000484560 AKT1S1Q96B36 256 aa20.64■□□□□ 0.89
PLSCR1-212ENST00000484560 ZNF692Q9BU19 519 aaPredicted RBP20.57■□□□□ 0.88
PLSCR1-212ENST00000484560 SSUH2Q9Y2M2 353 aa20.56■□□□□ 0.88
PLSCR1-212ENST00000484560 SPDYE4A6NLX3 237 aa20.46■□□□□ 0.87
PLSCR1-212ENST00000484560 REM2Q8IYK8 340 aaPredicted RBP20.4■□□□□ 0.86
PLSCR1-212ENST00000484560 PABPN1Q86U42 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
PLSCR1-212ENST00000484560 FKBP8Q14318 412 aa20.21■□□□□ 0.83
PLSCR1-212ENST00000484560 PROM2Q8N271 834 aa20.19■□□□□ 0.82
PLSCR1-212ENST00000484560 SPDYE1Q8NFV5 336 aaPredicted RBP20.18■□□□□ 0.82
PLSCR1-212ENST00000484560 PITPNM1O00562 1244 aa20.15■□□□□ 0.82
PLSCR1-212ENST00000484560 CHRDL2Q6WN34 429 aa20.13■□□□□ 0.81
PLSCR1-212ENST00000484560 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
PLSCR1-212ENST00000484560 CLEC11AQ9Y240 323 aa19.99■□□□□ 0.79
PLSCR1-212ENST00000484560 FXR2P51116 673 aaKnown RBP eCLIP19.88■□□□□ 0.77
PLSCR1-212ENST00000484560 PRR29P0C7W0 189 aa19.85■□□□□ 0.77
PLSCR1-212ENST00000484560 PIP4P2Q8N4L2 257 aa19.81■□□□□ 0.76
PLSCR1-212ENST00000484560 POTEHQ6S545 545 aa19.75■□□□□ 0.75
PLSCR1-212ENST00000484560 FBXO3Q9UK99 471 aa19.66■□□□□ 0.74
PLSCR1-212ENST00000484560 PRKAR2AP13861 404 aaKnown RBP19.63■□□□□ 0.73
PLSCR1-212ENST00000484560 CREBZFQ9NS37 354 aa19.55■□□□□ 0.72
PLSCR1-212ENST00000484560 CHADLQ6NUI6 762 aa19.52■□□□□ 0.72
PLSCR1-212ENST00000484560 MIER1Q8N108 512 aa19.41■□□□□ 0.7
PLSCR1-212ENST00000484560 FARP1Q9Y4F1 1045 aaPredicted RBP19.41■□□□□ 0.7
PLSCR1-212ENST00000484560 PLEKHG5O94827 1062 aa19.37■□□□□ 0.69
PLSCR1-212ENST00000484560 MNX1P50219 401 aaPredicted RBP19.35■□□□□ 0.69
PLSCR1-212ENST00000484560 VASPP50552 380 aaPredicted RBP19.35■□□□□ 0.69
PLSCR1-212ENST00000484560 PLCD3Q8N3E9 789 aa19.34■□□□□ 0.69
PLSCR1-212ENST00000484560 NPM1P06748 294 aaKnown RBP eCLIP19.25■□□□□ 0.67
PLSCR1-212ENST00000484560 ZBTB47Q9UFB7 747 aaPredicted RBP19.24■□□□□ 0.67
PLSCR1-212ENST00000484560 C19orf67A6NJJ6 358 aa19.2■□□□□ 0.66
PLSCR1-212ENST00000484560 HAX1O00165 279 aa19.2■□□□□ 0.66
PLSCR1-212ENST00000484560 CD44P16070 742 aaKnown RBP19.06■□□□□ 0.64
PLSCR1-212ENST00000484560 IFNLR1Q8IU57 520 aaPredicted RBP19.06■□□□□ 0.64
PLSCR1-212ENST00000484560 EVX2Q03828 476 aa19.02■□□□□ 0.64
PLSCR1-212ENST00000484560 KLHL34Q8N239 644 aa19.01■□□□□ 0.63
PLSCR1-212ENST00000484560 NUBP1P53384 320 aa18.99■□□□□ 0.63
PLSCR1-212ENST00000484560 PAK3O75914 559 aaPredicted RBP18.95■□□□□ 0.62
PLSCR1-212ENST00000484560 RASEFQ8IZ41 740 aa18.92■□□□□ 0.62
PLSCR1-212ENST00000484560 SP7Q8TDD2 431 aaPredicted RBP18.9■□□□□ 0.62
PLSCR1-212ENST00000484560 ZRANB1Q9UGI0 708 aa18.9■□□□□ 0.62
PLSCR1-212ENST00000484560 SPOCK2Q92563 424 aa18.89■□□□□ 0.61
PLSCR1-212ENST00000484560 ZNF579Q8NAF0 562 aaKnown RBP18.87■□□□□ 0.61
PLSCR1-212ENST00000484560 TSPYL2Q9H2G4 693 aaPredicted RBP18.83■□□□□ 0.6
PLSCR1-212ENST00000484560 CLCN6P51797 869 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms