RNA–Protein interactions for RNA: ENST00000483298.1

JMJD1C-206, Transcript of jumonji domain containing 1C, humanhuman

TSL 2

Gene JMJD1C, Length 772 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JMJD1C-206ENST00000483298 AEBP2Q6ZN18 517 aaPredicted RBP32.42■■■□□ 2.78
JMJD1C-206ENST00000483298 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
JMJD1C-206ENST00000483298 SENP3Q9H4L4 574 aaPredicted RBP27.76■■■□□ 2.03
JMJD1C-206ENST00000483298 PHF23Q9BUL5 403 aaPredicted RBP27.3■■□□□ 1.96
JMJD1C-206ENST00000483298 FOXD1Q16676 465 aa26■■□□□ 1.75
JMJD1C-206ENST00000483298 POTEDQ86YR6 584 aa25.56■■□□□ 1.68
JMJD1C-206ENST00000483298 MSH5O43196 834 aa24.65■■□□□ 1.54
JMJD1C-206ENST00000483298 PIAS4Q8N2W9 510 aaPredicted RBP24.06■■□□□ 1.44
JMJD1C-206ENST00000483298 PPP6R1Q9UPN7 881 aa23.66■■□□□ 1.38
JMJD1C-206ENST00000483298 ADRA2BP18089 450 aa23.51■■□□□ 1.35
JMJD1C-206ENST00000483298 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
JMJD1C-206ENST00000483298 DMRT2Q9Y5R5 561 aa21.89■■□□□ 1.09
JMJD1C-206ENST00000483298 MAPK8IP2Q13387 824 aaPredicted RBP21.87■■□□□ 1.09
JMJD1C-206ENST00000483298 CACNB1Q02641 598 aaPredicted RBP21.68■■□□□ 1.06
JMJD1C-206ENST00000483298 SCAF1Q9H7N4 1312 aaKnown RBP21.5■■□□□ 1.03
JMJD1C-206ENST00000483298 DCAF8L1A6NGE4 600 aa21■□□□□ 0.95
JMJD1C-206ENST00000483298 RNF39Q9H2S5 420 aa20.96■□□□□ 0.95
JMJD1C-206ENST00000483298 HOXD11P31277 338 aaPredicted RBP20.75■□□□□ 0.91
JMJD1C-206ENST00000483298 C1QBPQ07021 282 aaKnown RBP20.61■□□□□ 0.89
JMJD1C-206ENST00000483298 PPP4R3CPQ6ZMV5 832 aa20.5■□□□□ 0.87
JMJD1C-206ENST00000483298 RNF216Q9NWF9 866 aaPredicted RBP20.35■□□□□ 0.85
JMJD1C-206ENST00000483298 CNKSR2Q8WXI2 1034 aa20.31■□□□□ 0.84
JMJD1C-206ENST00000483298 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
JMJD1C-206ENST00000483298 POTEHQ6S545 545 aa19.85■□□□□ 0.77
JMJD1C-206ENST00000483298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.74■□□□□ 0.75
JMJD1C-206ENST00000483298 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
JMJD1C-206ENST00000483298 DSG3P32926 999 aa19.34■□□□□ 0.69
JMJD1C-206ENST00000483298 U3KPZ7 1027 aaPredicted RBP19.24■□□□□ 0.67
JMJD1C-206ENST00000483298 SPINK5Q9NQ38 1064 aaPredicted RBP19.23■□□□□ 0.67
JMJD1C-206ENST00000483298 CAPN15O75808 1086 aa19.22■□□□□ 0.67
JMJD1C-206ENST00000483298 NPM3O75607 178 aaKnown RBP19.16■□□□□ 0.66
JMJD1C-206ENST00000483298 ABCB7O75027 752 aa18.7■□□□□ 0.58
JMJD1C-206ENST00000483298 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
JMJD1C-206ENST00000483298 ZNF219Q9P2Y4 722 aaPredicted RBP18.63■□□□□ 0.57
JMJD1C-206ENST00000483298 APLP2Q06481 763 aa18.58■□□□□ 0.56
JMJD1C-206ENST00000483298 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
JMJD1C-206ENST00000483298 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
JMJD1C-206ENST00000483298 CHRDL2Q6WN34 429 aa18.41■□□□□ 0.54
JMJD1C-206ENST00000483298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
JMJD1C-206ENST00000483298 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
JMJD1C-206ENST00000483298 SAMD1Q6SPF0 538 aaPredicted RBP18.23■□□□□ 0.51
JMJD1C-206ENST00000483298 SP7Q8TDD2 431 aaPredicted RBP18.2■□□□□ 0.5
JMJD1C-206ENST00000483298 KCNA4P22459 653 aa18.02■□□□□ 0.48
JMJD1C-206ENST00000483298 POLA2Q14181 598 aa18.02■□□□□ 0.48
JMJD1C-206ENST00000483298 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
JMJD1C-206ENST00000483298 PIP4P2Q8N4L2 257 aa17.79■□□□□ 0.44
JMJD1C-206ENST00000483298 MYCNP04198 464 aaPredicted RBP17.73■□□□□ 0.43
JMJD1C-206ENST00000483298 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
JMJD1C-206ENST00000483298 HAX1O00165 279 aa17.69■□□□□ 0.42
JMJD1C-206ENST00000483298 FXR2P51116 673 aaKnown RBP eCLIP17.56■□□□□ 0.41e-6■■■■■ 26.8
JMJD1C-206ENST00000483298 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
JMJD1C-206ENST00000483298 PITPNM1O00562 1244 aa17.52■□□□□ 0.4
JMJD1C-206ENST00000483298 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
JMJD1C-206ENST00000483298 EVX2Q03828 476 aa17.44■□□□□ 0.38
JMJD1C-206ENST00000483298 ATF5Q9Y2D1 282 aaPredicted RBP17.42■□□□□ 0.38
JMJD1C-206ENST00000483298 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
JMJD1C-206ENST00000483298 LHX8Q68G74 356 aa17.06■□□□□ 0.32
JMJD1C-206ENST00000483298 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
JMJD1C-206ENST00000483298 C19orf67A6NJJ6 358 aa17.03■□□□□ 0.32
JMJD1C-206ENST00000483298 GABBR2O75899 941 aa16.99■□□□□ 0.31
JMJD1C-206ENST00000483298 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
JMJD1C-206ENST00000483298 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
JMJD1C-206ENST00000483298 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
JMJD1C-206ENST00000483298 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
JMJD1C-206ENST00000483298 SPDYE1Q8NFV5 336 aaPredicted RBP16.87■□□□□ 0.29
JMJD1C-206ENST00000483298 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
JMJD1C-206ENST00000483298 FBLN2P98095 1184 aa16.76■□□□□ 0.27
JMJD1C-206ENST00000483298 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
JMJD1C-206ENST00000483298 PLSCR2Q9NRY7 297 aa16.67■□□□□ 0.26
JMJD1C-206ENST00000483298 ATXN8OSP0DMR3 200 aa16.65■□□□□ 0.26
JMJD1C-206ENST00000483298 SSUH2Q9Y2M2 353 aa16.65■□□□□ 0.26
JMJD1C-206ENST00000483298 POTEIP0CG38 1075 aa16.63■□□□□ 0.25
JMJD1C-206ENST00000483298 ZNF692Q9BU19 519 aaPredicted RBP16.62■□□□□ 0.25
JMJD1C-206ENST00000483298 MKRN4PQ13434 485 aaPredicted RBP16.57■□□□□ 0.24
JMJD1C-206ENST00000483298 ZBTB22O15209 634 aa16.56■□□□□ 0.24
JMJD1C-206ENST00000483298 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
JMJD1C-206ENST00000483298 CD44P16070 742 aaKnown RBP16.45■□□□□ 0.22
JMJD1C-206ENST00000483298 CLCN6P51797 869 aa16.41■□□□□ 0.22
JMJD1C-206ENST00000483298 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
JMJD1C-206ENST00000483298 FARP1Q9Y4F1 1045 aaPredicted RBP16.34■□□□□ 0.21
JMJD1C-206ENST00000483298 DCBLD2Q96PD2 775 aa16.32■□□□□ 0.2
JMJD1C-206ENST00000483298 OTUD5Q96G74 571 aa16.18■□□□□ 0.18
JMJD1C-206ENST00000483298 ZNF579Q8NAF0 562 aaKnown RBP16.16■□□□□ 0.18
JMJD1C-206ENST00000483298 POTEMA6NI47 508 aa16.1■□□□□ 0.17
JMJD1C-206ENST00000483298 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.16
JMJD1C-206ENST00000483298 POTEB2H3BUK9 544 aa16.07■□□□□ 0.16
JMJD1C-206ENST00000483298 GALR2O43603 387 aaPredicted RBP16.03■□□□□ 0.16
JMJD1C-206ENST00000483298 POTEGQ6S5H5 508 aa16.02■□□□□ 0.16
JMJD1C-206ENST00000483298 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
JMJD1C-206ENST00000483298 PCDH10Q9P2E7 1040 aa15.9■□□□□ 0.14
JMJD1C-206ENST00000483298 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
JMJD1C-206ENST00000483298 PHF12Q96QT6 1004 aa15.78■□□□□ 0.12
JMJD1C-206ENST00000483298 PAK3O75914 559 aaPredicted RBP15.74■□□□□ 0.11
JMJD1C-206ENST00000483298 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
JMJD1C-206ENST00000483298 POTEJP0CG39 1038 aa15.7■□□□□ 0.1
JMJD1C-206ENST00000483298 METRNQ9UJH8 293 aa15.68■□□□□ 0.1
JMJD1C-206ENST00000483298 LCE2DQ5TA82 110 aaPredicted RBP15.66■□□□□ 0.1
JMJD1C-206ENST00000483298 ASTLQ6HA08 431 aaPredicted RBP15.65■□□□□ 0.1
JMJD1C-206ENST00000483298 C7P10643 843 aa15.62■□□□□ 0.09
JMJD1C-206ENST00000483298 MAMSTRQ6ZN01 415 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms