RNA–Protein interactions for RNA: ENST00000482496.5

PDZD8-202, Transcript of PDZ domain containing 8, humanhuman

TSL 2

Gene PDZD8, Length 1,400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-202ENST00000482496 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
PDZD8-202ENST00000482496 CHIC1Q5VXU3 224 aa19.23■□□□□ 0.67
PDZD8-202ENST00000482496 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
PDZD8-202ENST00000482496 PHF23Q9BUL5 403 aaPredicted RBP17.29■□□□□ 0.36
PDZD8-202ENST00000482496 FOXD1Q16676 465 aa16.45■□□□□ 0.22
PDZD8-202ENST00000482496 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
PDZD8-202ENST00000482496 MSH5O43196 834 aa15.73■□□□□ 0.11
PDZD8-202ENST00000482496 PIAS4Q8N2W9 510 aaPredicted RBP15.24■□□□□ 0.03
PDZD8-202ENST00000482496 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
PDZD8-202ENST00000482496 PPP6R1Q9UPN7 881 aa14.87□□□□□ -0.03
PDZD8-202ENST00000482496 ADRA2BP18089 450 aa14.79□□□□□ -0.04
PDZD8-202ENST00000482496 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.19
PDZD8-202ENST00000482496 CACNB1Q02641 598 aaPredicted RBP13.79□□□□□ -0.2
PDZD8-202ENST00000482496 MAPK8IP2Q13387 824 aaPredicted RBP13.74□□□□□ -0.21
PDZD8-202ENST00000482496 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
PDZD8-202ENST00000482496 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
PDZD8-202ENST00000482496 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
PDZD8-202ENST00000482496 HOXD11P31277 338 aaPredicted RBP13.16□□□□□ -0.3
PDZD8-202ENST00000482496 C1QBPQ07021 282 aaKnown RBP13.13□□□□□ -0.31
PDZD8-202ENST00000482496 DNAJC5BQ9UF47 199 aa12.94□□□□□ -0.34
PDZD8-202ENST00000482496 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
PDZD8-202ENST00000482496 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
PDZD8-202ENST00000482496 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
PDZD8-202ENST00000482496 POTEHQ6S545 545 aa12.63□□□□□ -0.39
PDZD8-202ENST00000482496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■□□□ 11.6
PDZD8-202ENST00000482496 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
PDZD8-202ENST00000482496 DSG3P32926 999 aa12.25□□□□□ -0.45
PDZD8-202ENST00000482496 CAPN15O75808 1086 aa12.16□□□□□ -0.46
PDZD8-202ENST00000482496 U3KPZ7 1027 aaPredicted RBP12.15□□□□□ -0.46
PDZD8-202ENST00000482496 SPINK5Q9NQ38 1064 aaPredicted RBP12.11□□□□□ -0.47
PDZD8-202ENST00000482496 NPM3O75607 178 aaKnown RBP12.06□□□□□ -0.48
PDZD8-202ENST00000482496 APLP2Q06481 763 aa11.91□□□□□ -0.5
PDZD8-202ENST00000482496 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
PDZD8-202ENST00000482496 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
PDZD8-202ENST00000482496 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
PDZD8-202ENST00000482496 ABCB7O75027 752 aa11.77□□□□□ -0.53
PDZD8-202ENST00000482496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
PDZD8-202ENST00000482496 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
PDZD8-202ENST00000482496 CHRDL2Q6WN34 429 aa11.69□□□□□ -0.54
PDZD8-202ENST00000482496 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
PDZD8-202ENST00000482496 SAMD1Q6SPF0 538 aaPredicted RBP11.6□□□□□ -0.55
PDZD8-202ENST00000482496 KCNA4P22459 653 aa11.6□□□□□ -0.55
PDZD8-202ENST00000482496 SP7Q8TDD2 431 aaPredicted RBP11.59□□□□□ -0.55
PDZD8-202ENST00000482496 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
PDZD8-202ENST00000482496 POLA2Q14181 598 aa11.36□□□□□ -0.59
PDZD8-202ENST00000482496 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
PDZD8-202ENST00000482496 MYCNP04198 464 aaPredicted RBP11.23□□□□□ -0.61
PDZD8-202ENST00000482496 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
PDZD8-202ENST00000482496 HAX1O00165 279 aa11.22□□□□□ -0.61
PDZD8-202ENST00000482496 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.61
PDZD8-202ENST00000482496 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.625e-7■■■■■ 27
PDZD8-202ENST00000482496 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
PDZD8-202ENST00000482496 OSCARQ8IYS5 282 aa11.01□□□□□ -0.65
PDZD8-202ENST00000482496 EVX2Q03828 476 aa10.96□□□□□ -0.65
PDZD8-202ENST00000482496 ATF5Q9Y2D1 282 aaPredicted RBP10.89□□□□□ -0.67
PDZD8-202ENST00000482496 SLC4A1APQ9BWU0 796 aaKnown RBP10.86□□□□□ -0.67
PDZD8-202ENST00000482496 LHX8Q68G74 356 aa10.84□□□□□ -0.67
PDZD8-202ENST00000482496 C19orf67A6NJJ6 358 aa10.81□□□□□ -0.68
PDZD8-202ENST00000482496 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
PDZD8-202ENST00000482496 SPDYE2BA6NHP3 402 aa10.78□□□□□ -0.68
PDZD8-202ENST00000482496 SPDYE6P0CI01 402 aa10.78□□□□□ -0.68
PDZD8-202ENST00000482496 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
PDZD8-202ENST00000482496 FOXD4L1Q9NU39 408 aa10.77□□□□□ -0.68
PDZD8-202ENST00000482496 GABBR2O75899 941 aa10.75□□□□□ -0.69
PDZD8-202ENST00000482496 SPDYE1Q8NFV5 336 aaPredicted RBP10.74□□□□□ -0.69
PDZD8-202ENST00000482496 ZBTB22O15209 634 aa10.73□□□□□ -0.69
PDZD8-202ENST00000482496 CLEC11AQ9Y240 323 aa10.66□□□□□ -0.7
PDZD8-202ENST00000482496 FBLN2P98095 1184 aa10.65□□□□□ -0.7
PDZD8-202ENST00000482496 PLSCR2Q9NRY7 297 aa10.59□□□□□ -0.71
PDZD8-202ENST00000482496 ATXN8OSP0DMR3 200 aa10.58□□□□□ -0.72
PDZD8-202ENST00000482496 CLCN6P51797 869 aa10.57□□□□□ -0.72
PDZD8-202ENST00000482496 SSUH2Q9Y2M2 353 aa10.55□□□□□ -0.72
PDZD8-202ENST00000482496 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
PDZD8-202ENST00000482496 POTEIP0CG38 1075 aa10.49□□□□□ -0.73
PDZD8-202ENST00000482496 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
PDZD8-202ENST00000482496 PRR29P0C7W0 189 aa10.44□□□□□ -0.74
PDZD8-202ENST00000482496 CD44P16070 742 aaKnown RBP10.42□□□□□ -0.74
PDZD8-202ENST00000482496 MKRN4PQ13434 485 aaPredicted RBP10.39□□□□□ -0.75
PDZD8-202ENST00000482496 DCBLD2Q96PD2 775 aa10.37□□□□□ -0.75
PDZD8-202ENST00000482496 FARP1Q9Y4F1 1045 aaPredicted RBP10.34□□□□□ -0.75
PDZD8-202ENST00000482496 PABPN1Q86U42 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
PDZD8-202ENST00000482496 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
PDZD8-202ENST00000482496 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
PDZD8-202ENST00000482496 PCDH10Q9P2E7 1040 aa10.24□□□□□ -0.77
PDZD8-202ENST00000482496 POTEMA6NI47 508 aa10.23□□□□□ -0.77
PDZD8-202ENST00000482496 CSRNP3Q8WYN3 585 aa10.22□□□□□ -0.77
PDZD8-202ENST00000482496 POTEGQ6S5H5 508 aa10.17□□□□□ -0.78
PDZD8-202ENST00000482496 ZRANB1Q9UGI0 708 aa10.17□□□□□ -0.78
PDZD8-202ENST00000482496 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
PDZD8-202ENST00000482496 GALR2O43603 387 aaPredicted RBP10.11□□□□□ -0.79
PDZD8-202ENST00000482496 EHMT2Q96KQ7 1210 aa10.07□□□□□ -0.8
PDZD8-202ENST00000482496 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
PDZD8-202ENST00000482496 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
PDZD8-202ENST00000482496 STAG3Q9UJ98 1225 aa10.01□□□□□ -0.81
PDZD8-202ENST00000482496 MAMSTRQ6ZN01 415 aa10□□□□□ -0.81
PDZD8-202ENST00000482496 C7P10643 843 aa9.95□□□□□ -0.82
PDZD8-202ENST00000482496 PELP1Q8IZL8 1130 aaKnown RBP9.95□□□□□ -0.82
PDZD8-202ENST00000482496 SLC39A7Q92504 469 aa9.94□□□□□ -0.82
PDZD8-202ENST00000482496 PHF12Q96QT6 1004 aa9.94□□□□□ -0.82
PDZD8-202ENST00000482496 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms