RNA–Protein interactions for RNA: ENST00000481840.1

ZIC1-204, Transcript of Zic family member 1, humanhuman

TSL 2

Gene ZIC1, Length 418 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1-204ENST00000481840 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
ZIC1-204ENST00000481840 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
ZIC1-204ENST00000481840 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
ZIC1-204ENST00000481840 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
ZIC1-204ENST00000481840 FOXD1Q16676 465 aa17.2■□□□□ 0.34
ZIC1-204ENST00000481840 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
ZIC1-204ENST00000481840 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
ZIC1-204ENST00000481840 ADRA2BP18089 450 aa16.4■□□□□ 0.22
ZIC1-204ENST00000481840 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
ZIC1-204ENST00000481840 MSH5O43196 834 aa15.93■□□□□ 0.14
ZIC1-204ENST00000481840 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
ZIC1-204ENST00000481840 PPP4R3CPQ6ZMV5 832 aa15.04■□□□□ -0
ZIC1-204ENST00000481840 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
ZIC1-204ENST00000481840 DMRT2Q9Y5R5 561 aa14.76□□□□□ -0.05
ZIC1-204ENST00000481840 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
ZIC1-204ENST00000481840 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
ZIC1-204ENST00000481840 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
ZIC1-204ENST00000481840 KCNA4P22459 653 aa14.51□□□□□ -0.09
ZIC1-204ENST00000481840 RNF216Q9NWF9 866 aaPredicted RBP14.42□□□□□ -0.1
ZIC1-204ENST00000481840 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
ZIC1-204ENST00000481840 NPM3O75607 178 aaKnown RBP14.39□□□□□ -0.11
ZIC1-204ENST00000481840 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
ZIC1-204ENST00000481840 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
ZIC1-204ENST00000481840 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
ZIC1-204ENST00000481840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.71□□□□□ -0.21
ZIC1-204ENST00000481840 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
ZIC1-204ENST00000481840 RNF39Q9H2S5 420 aa13.63□□□□□ -0.23
ZIC1-204ENST00000481840 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
ZIC1-204ENST00000481840 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
ZIC1-204ENST00000481840 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
ZIC1-204ENST00000481840 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
ZIC1-204ENST00000481840 ZBTB22O15209 634 aa13.35□□□□□ -0.27
ZIC1-204ENST00000481840 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
ZIC1-204ENST00000481840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
ZIC1-204ENST00000481840 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
ZIC1-204ENST00000481840 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.29
ZIC1-204ENST00000481840 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
ZIC1-204ENST00000481840 APLP2Q06481 763 aa13.17□□□□□ -0.3
ZIC1-204ENST00000481840 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
ZIC1-204ENST00000481840 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
ZIC1-204ENST00000481840 CAPN15O75808 1086 aa13.08□□□□□ -0.32
ZIC1-204ENST00000481840 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
ZIC1-204ENST00000481840 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
ZIC1-204ENST00000481840 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
ZIC1-204ENST00000481840 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
ZIC1-204ENST00000481840 DSG3P32926 999 aa12.91□□□□□ -0.34
ZIC1-204ENST00000481840 ABCB7O75027 752 aa12.81□□□□□ -0.36
ZIC1-204ENST00000481840 POLA2Q14181 598 aa12.77□□□□□ -0.37
ZIC1-204ENST00000481840 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
ZIC1-204ENST00000481840 FBLN2P98095 1184 aa12.43□□□□□ -0.42
ZIC1-204ENST00000481840 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
ZIC1-204ENST00000481840 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
ZIC1-204ENST00000481840 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
ZIC1-204ENST00000481840 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
ZIC1-204ENST00000481840 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
ZIC1-204ENST00000481840 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
ZIC1-204ENST00000481840 AKT1S1Q96B36 256 aa12.14□□□□□ -0.47
ZIC1-204ENST00000481840 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
ZIC1-204ENST00000481840 SSUH2Q9Y2M2 353 aa12.08□□□□□ -0.48
ZIC1-204ENST00000481840 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
ZIC1-204ENST00000481840 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
ZIC1-204ENST00000481840 PABPN1Q86U42 306 aaKnown RBP eCLIP11.95□□□□□ -0.5
ZIC1-204ENST00000481840 FKBP8Q14318 412 aa11.89□□□□□ -0.51
ZIC1-204ENST00000481840 PITPNM1O00562 1244 aa11.87□□□□□ -0.51
ZIC1-204ENST00000481840 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
ZIC1-204ENST00000481840 CHRDL2Q6WN34 429 aa11.86□□□□□ -0.51
ZIC1-204ENST00000481840 PROM2Q8N271 834 aa11.83□□□□□ -0.52
ZIC1-204ENST00000481840 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
ZIC1-204ENST00000481840 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
ZIC1-204ENST00000481840 PRR29P0C7W0 189 aa11.69□□□□□ -0.54
ZIC1-204ENST00000481840 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
ZIC1-204ENST00000481840 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
ZIC1-204ENST00000481840 POTEHQ6S545 545 aa11.65□□□□□ -0.54
ZIC1-204ENST00000481840 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
ZIC1-204ENST00000481840 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
ZIC1-204ENST00000481840 CHADLQ6NUI6 762 aa11.52□□□□□ -0.57
ZIC1-204ENST00000481840 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
ZIC1-204ENST00000481840 MIER1Q8N108 512 aa11.44□□□□□ -0.58
ZIC1-204ENST00000481840 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
ZIC1-204ENST00000481840 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
ZIC1-204ENST00000481840 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
ZIC1-204ENST00000481840 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
ZIC1-204ENST00000481840 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
ZIC1-204ENST00000481840 HAX1O00165 279 aa11.34□□□□□ -0.59
ZIC1-204ENST00000481840 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
ZIC1-204ENST00000481840 C19orf67A6NJJ6 358 aa11.3□□□□□ -0.6
ZIC1-204ENST00000481840 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
ZIC1-204ENST00000481840 CD44P16070 742 aaKnown RBP11.23□□□□□ -0.61
ZIC1-204ENST00000481840 EVX2Q03828 476 aa11.23□□□□□ -0.61
ZIC1-204ENST00000481840 KLHL34Q8N239 644 aa11.21□□□□□ -0.61
ZIC1-204ENST00000481840 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
ZIC1-204ENST00000481840 NUBP1P53384 320 aa11.16□□□□□ -0.62
ZIC1-204ENST00000481840 PAK3O75914 559 aaPredicted RBP11.15□□□□□ -0.62
ZIC1-204ENST00000481840 RASEFQ8IZ41 740 aa11.14□□□□□ -0.63
ZIC1-204ENST00000481840 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
ZIC1-204ENST00000481840 ZRANB1Q9UGI0 708 aa11.14□□□□□ -0.63
ZIC1-204ENST00000481840 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
ZIC1-204ENST00000481840 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
ZIC1-204ENST00000481840 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
ZIC1-204ENST00000481840 FAM212AQ96EL1 285 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms