RNA–Protein interactions for RNA: ENST00000481562.1

APOBEC4-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4, humanhuman

TSL 3

Gene APOBEC4, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC4-202ENST00000481562 AEBP2Q6ZN18 517 aaPredicted RBP15.5■□□□□ 0.07
APOBEC4-202ENST00000481562 CHIC1Q5VXU3 224 aa15.19■□□□□ 0.02
APOBEC4-202ENST00000481562 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
APOBEC4-202ENST00000481562 PHF23Q9BUL5 403 aaPredicted RBP13.23□□□□□ -0.29
APOBEC4-202ENST00000481562 PLPPR3Q6T4P5 718 aa12.38□□□□□ -0.43
APOBEC4-202ENST00000481562 FOXD1Q16676 465 aa12.28□□□□□ -0.44
APOBEC4-202ENST00000481562 ADRA2BP18089 450 aa11.7□□□□□ -0.54
APOBEC4-202ENST00000481562 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
APOBEC4-202ENST00000481562 PIAS4Q8N2W9 510 aaPredicted RBP11.64□□□□□ -0.55
APOBEC4-202ENST00000481562 MSH5O43196 834 aa11.53□□□□□ -0.56
APOBEC4-202ENST00000481562 SCAF1Q9H7N4 1312 aaKnown RBP10.95□□□□□ -0.66
APOBEC4-202ENST00000481562 PPP4R3CPQ6ZMV5 832 aa10.82□□□□□ -0.68
APOBEC4-202ENST00000481562 NCBP3Q53F19 620 aaKnown RBP10.66□□□□□ -0.7
APOBEC4-202ENST00000481562 DMRT2Q9Y5R5 561 aa10.61□□□□□ -0.71
APOBEC4-202ENST00000481562 CNKSR2Q8WXI2 1034 aa10.6□□□□□ -0.71
APOBEC4-202ENST00000481562 MAPK8IP2Q13387 824 aaPredicted RBP10.59□□□□□ -0.71
APOBEC4-202ENST00000481562 POTEDQ86YR6 584 aa10.49□□□□□ -0.73
APOBEC4-202ENST00000481562 KCNA4P22459 653 aa10.42□□□□□ -0.74
APOBEC4-202ENST00000481562 RNF216Q9NWF9 866 aaPredicted RBP10.42□□□□□ -0.74
APOBEC4-202ENST00000481562 HOXD11P31277 338 aaPredicted RBP10.36□□□□□ -0.75
APOBEC4-202ENST00000481562 NPM3O75607 178 aaKnown RBP10.33□□□□□ -0.76
APOBEC4-202ENST00000481562 DNAJC5BQ9UF47 199 aa10.17□□□□□ -0.78
APOBEC4-202ENST00000481562 DCAF8L1A6NGE4 600 aa10.15□□□□□ -0.78
APOBEC4-202ENST00000481562 SLC4A1APQ9BWU0 796 aaKnown RBP9.99□□□□□ -0.81
APOBEC4-202ENST00000481562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.9□□□□□ -0.82
APOBEC4-202ENST00000481562 RNF39Q9H2S5 420 aa9.77□□□□□ -0.85
APOBEC4-202ENST00000481562 C1QBPQ07021 282 aaKnown RBP9.74□□□□□ -0.85
APOBEC4-202ENST00000481562 SLC4A2P04920 1241 aa9.73□□□□□ -0.85
APOBEC4-202ENST00000481562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.72□□□□□ -0.85
APOBEC4-202ENST00000481562 HNRNPUL2Q1KMD3 747 aaKnown RBP9.72□□□□□ -0.85
APOBEC4-202ENST00000481562 FOXD4L1Q9NU39 408 aa9.72□□□□□ -0.85
APOBEC4-202ENST00000481562 APLP2Q06481 763 aa9.69□□□□□ -0.86
APOBEC4-202ENST00000481562 MYCNP04198 464 aaPredicted RBP9.65□□□□□ -0.86
APOBEC4-202ENST00000481562 U3KPZ7 1027 aaPredicted RBP9.65□□□□□ -0.86
APOBEC4-202ENST00000481562 SAMD1Q6SPF0 538 aaPredicted RBP9.63□□□□□ -0.87
APOBEC4-202ENST00000481562 CACNB1Q02641 598 aaPredicted RBP9.6□□□□□ -0.87
APOBEC4-202ENST00000481562 EHMT2Q96KQ7 1210 aa9.55□□□□□ -0.88
APOBEC4-202ENST00000481562 ZBTB22O15209 634 aa9.51□□□□□ -0.89
APOBEC4-202ENST00000481562 ATXN8OSP0DMR3 200 aa9.45□□□□□ -0.9
APOBEC4-202ENST00000481562 CSRNP3Q8WYN3 585 aa9.45□□□□□ -0.9
APOBEC4-202ENST00000481562 ZNF219Q9P2Y4 722 aaPredicted RBP9.45□□□□□ -0.9
APOBEC4-202ENST00000481562 CAPN15O75808 1086 aa9.44□□□□□ -0.9
APOBEC4-202ENST00000481562 SPINK5Q9NQ38 1064 aaPredicted RBP9.36□□□□□ -0.91
APOBEC4-202ENST00000481562 TRHP20396 242 aaPredicted RBP9.34□□□□□ -0.91
APOBEC4-202ENST00000481562 DSG3P32926 999 aa9.25□□□□□ -0.93
APOBEC4-202ENST00000481562 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
APOBEC4-202ENST00000481562 ZBTB12Q9Y330 459 aaPredicted RBP9.19□□□□□ -0.94
APOBEC4-202ENST00000481562 ABCB7O75027 752 aa9.17□□□□□ -0.94
APOBEC4-202ENST00000481562 POLA2Q14181 598 aa9.17□□□□□ -0.94
APOBEC4-202ENST00000481562 FBLN2P98095 1184 aa9.07□□□□□ -0.96
APOBEC4-202ENST00000481562 RBM42Q9BTD8 480 aaKnown RBP8.98□□□□□ -0.97
APOBEC4-202ENST00000481562 SPDYE2BA6NHP3 402 aa8.85□□□□□ -0.99
APOBEC4-202ENST00000481562 SPDYE6P0CI01 402 aa8.85□□□□□ -0.99
APOBEC4-202ENST00000481562 SPDYE2Q495Y8 402 aa8.85□□□□□ -0.99
APOBEC4-202ENST00000481562 OSCARQ8IYS5 282 aa8.85□□□□□ -0.99
APOBEC4-202ENST00000481562 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
APOBEC4-202ENST00000481562 AKT1S1Q96B36 256 aa8.78□□□□□ -1
APOBEC4-202ENST00000481562 ZNF692Q9BU19 519 aaPredicted RBP8.76□□□□□ -1.01
APOBEC4-202ENST00000481562 SPDYE4A6NLX3 237 aa8.72□□□□□ -1.01
APOBEC4-202ENST00000481562 SSUH2Q9Y2M2 353 aa8.71□□□□□ -1.02
APOBEC4-202ENST00000481562 REM2Q8IYK8 340 aaPredicted RBP8.63□□□□□ -1.03
APOBEC4-202ENST00000481562 SPDYE1Q8NFV5 336 aaPredicted RBP8.62□□□□□ -1.03
APOBEC4-202ENST00000481562 FKBP8Q14318 412 aa8.61□□□□□ -1.03
APOBEC4-202ENST00000481562 PABPN1Q86U42 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
APOBEC4-202ENST00000481562 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
APOBEC4-202ENST00000481562 CHRDL2Q6WN34 429 aa8.53□□□□□ -1.04
APOBEC4-202ENST00000481562 PROM2Q8N271 834 aa8.53□□□□□ -1.04
APOBEC4-202ENST00000481562 PITPNM1O00562 1244 aa8.51□□□□□ -1.05
APOBEC4-202ENST00000481562 CLEC11AQ9Y240 323 aa8.51□□□□□ -1.05
APOBEC4-202ENST00000481562 FBXO3Q9UK99 471 aa8.48□□□□□ -1.05
APOBEC4-202ENST00000481562 PRR29P0C7W0 189 aa8.47□□□□□ -1.05
APOBEC4-202ENST00000481562 PLEKHG5O94827 1062 aa8.41□□□□□ -1.06
APOBEC4-202ENST00000481562 FXR2P51116 673 aaKnown RBP eCLIP8.39□□□□□ -1.07
APOBEC4-202ENST00000481562 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
APOBEC4-202ENST00000481562 POTEHQ6S545 545 aa8.34□□□□□ -1.07
APOBEC4-202ENST00000481562 PRKAR2AP13861 404 aaKnown RBP8.33□□□□□ -1.08
APOBEC4-202ENST00000481562 ZBTB47Q9UFB7 747 aaPredicted RBP8.32□□□□□ -1.08
APOBEC4-202ENST00000481562 PLCD3Q8N3E9 789 aa8.29□□□□□ -1.08
APOBEC4-202ENST00000481562 MIER1Q8N108 512 aa8.28□□□□□ -1.08
APOBEC4-202ENST00000481562 NPM1P06748 294 aaKnown RBP eCLIP8.26□□□□□ -1.09
APOBEC4-202ENST00000481562 VASPP50552 380 aaPredicted RBP8.25□□□□□ -1.09
APOBEC4-202ENST00000481562 CREBZFQ9NS37 354 aa8.25□□□□□ -1.09
APOBEC4-202ENST00000481562 FARP1Q9Y4F1 1045 aaPredicted RBP8.23□□□□□ -1.09
APOBEC4-202ENST00000481562 CHADLQ6NUI6 762 aa8.22□□□□□ -1.09
APOBEC4-202ENST00000481562 PAK3O75914 559 aaPredicted RBP8.18□□□□□ -1.1
APOBEC4-202ENST00000481562 KLHL34Q8N239 644 aa8.16□□□□□ -1.1
APOBEC4-202ENST00000481562 HAX1O00165 279 aa8.15□□□□□ -1.1
APOBEC4-202ENST00000481562 MNX1P50219 401 aaPredicted RBP8.13□□□□□ -1.11
APOBEC4-202ENST00000481562 C19orf67A6NJJ6 358 aa8.11□□□□□ -1.11
APOBEC4-202ENST00000481562 CD44P16070 742 aaKnown RBP8.1□□□□□ -1.11
APOBEC4-202ENST00000481562 CLCN6P51797 869 aa8.1□□□□□ -1.11
APOBEC4-202ENST00000481562 SPOCK2Q92563 424 aa8.08□□□□□ -1.12
APOBEC4-202ENST00000481562 FAM212AQ96EL1 285 aa8.08□□□□□ -1.12
APOBEC4-202ENST00000481562 IFNLR1Q8IU57 520 aaPredicted RBP8.06□□□□□ -1.12
APOBEC4-202ENST00000481562 GSE1Q14687 1217 aa8.04□□□□□ -1.12
APOBEC4-202ENST00000481562 ZRANB1Q9UGI0 708 aa8.04□□□□□ -1.12
APOBEC4-202ENST00000481562 NUBP1P53384 320 aa8.02□□□□□ -1.13
APOBEC4-202ENST00000481562 ZNF579Q8NAF0 562 aaKnown RBP8.01□□□□□ -1.13
APOBEC4-202ENST00000481562 SP7Q8TDD2 431 aaPredicted RBP8□□□□□ -1.13
APOBEC4-202ENST00000481562 RASEFQ8IZ41 740 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms