RNA–Protein interactions for RNA: ENST00000481279.2

SUCLA2-206, Transcript of succinate-CoA ligase ADP-forming beta subunit, humanhuman

TSL 3

Gene SUCLA2, Length 466 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLA2-206ENST00000481279 AEBP2Q6ZN18 517 aaPredicted RBP27.11■■□□□ 1.93
SUCLA2-206ENST00000481279 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
SUCLA2-206ENST00000481279 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
SUCLA2-206ENST00000481279 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
SUCLA2-206ENST00000481279 FOXD1Q16676 465 aa21.78■■□□□ 1.08
SUCLA2-206ENST00000481279 POTEDQ86YR6 584 aa21.7■■□□□ 1.06
SUCLA2-206ENST00000481279 MSH5O43196 834 aa20.68■□□□□ 0.9
SUCLA2-206ENST00000481279 PIAS4Q8N2W9 510 aaPredicted RBP20.16■□□□□ 0.82
SUCLA2-206ENST00000481279 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
SUCLA2-206ENST00000481279 ADRA2BP18089 450 aa19.61■□□□□ 0.73
SUCLA2-206ENST00000481279 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
SUCLA2-206ENST00000481279 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
SUCLA2-206ENST00000481279 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
SUCLA2-206ENST00000481279 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
SUCLA2-206ENST00000481279 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
SUCLA2-206ENST00000481279 DCAF8L1A6NGE4 600 aa17.65■□□□□ 0.42
SUCLA2-206ENST00000481279 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
SUCLA2-206ENST00000481279 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
SUCLA2-206ENST00000481279 C1QBPQ07021 282 aaKnown RBP17.26■□□□□ 0.35
SUCLA2-206ENST00000481279 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
SUCLA2-206ENST00000481279 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
SUCLA2-206ENST00000481279 POTEHQ6S545 545 aa16.83■□□□□ 0.28
SUCLA2-206ENST00000481279 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
SUCLA2-206ENST00000481279 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
SUCLA2-206ENST00000481279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.23
SUCLA2-206ENST00000481279 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
SUCLA2-206ENST00000481279 DSG3P32926 999 aa16.18■□□□□ 0.18
SUCLA2-206ENST00000481279 CAPN15O75808 1086 aa16.1■□□□□ 0.17
SUCLA2-206ENST00000481279 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
SUCLA2-206ENST00000481279 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
SUCLA2-206ENST00000481279 NPM3O75607 178 aaKnown RBP15.9■□□□□ 0.14
SUCLA2-206ENST00000481279 ABCB7O75027 752 aa15.67■□□□□ 0.1
SUCLA2-206ENST00000481279 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
SUCLA2-206ENST00000481279 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
SUCLA2-206ENST00000481279 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
SUCLA2-206ENST00000481279 APLP2Q06481 763 aa15.44■□□□□ 0.06
SUCLA2-206ENST00000481279 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
SUCLA2-206ENST00000481279 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
SUCLA2-206ENST00000481279 SLC4A2P04920 1241 aa15.35■□□□□ 0.05
SUCLA2-206ENST00000481279 KCNA4P22459 653 aa15.26■□□□□ 0.03
SUCLA2-206ENST00000481279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
SUCLA2-206ENST00000481279 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
SUCLA2-206ENST00000481279 SAMD1Q6SPF0 538 aaPredicted RBP15.12■□□□□ 0.01
SUCLA2-206ENST00000481279 POLA2Q14181 598 aa15□□□□□ -0.01
SUCLA2-206ENST00000481279 PIP4P2Q8N4L2 257 aa14.93□□□□□ -0.02
SUCLA2-206ENST00000481279 HAX1O00165 279 aa14.91□□□□□ -0.02
SUCLA2-206ENST00000481279 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
SUCLA2-206ENST00000481279 REM2Q8IYK8 340 aaPredicted RBP14.8□□□□□ -0.04
SUCLA2-206ENST00000481279 MYCNP04198 464 aaPredicted RBP14.75□□□□□ -0.05
SUCLA2-206ENST00000481279 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
SUCLA2-206ENST00000481279 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
SUCLA2-206ENST00000481279 EVX2Q03828 476 aa14.66□□□□□ -0.06
SUCLA2-206ENST00000481279 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
SUCLA2-206ENST00000481279 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
SUCLA2-206ENST00000481279 ATF5Q9Y2D1 282 aaPredicted RBP14.42□□□□□ -0.1
SUCLA2-206ENST00000481279 LHX8Q68G74 356 aa14.4□□□□□ -0.1
SUCLA2-206ENST00000481279 FOXD4L1Q9NU39 408 aa14.39□□□□□ -0.11
SUCLA2-206ENST00000481279 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
SUCLA2-206ENST00000481279 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
SUCLA2-206ENST00000481279 PLSCR2Q9NRY7 297 aa14.27□□□□□ -0.13
SUCLA2-206ENST00000481279 GABBR2O75899 941 aa14.26□□□□□ -0.13
SUCLA2-206ENST00000481279 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
SUCLA2-206ENST00000481279 CLEC11AQ9Y240 323 aa14.12□□□□□ -0.15
SUCLA2-206ENST00000481279 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
SUCLA2-206ENST00000481279 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
SUCLA2-206ENST00000481279 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
SUCLA2-206ENST00000481279 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
SUCLA2-206ENST00000481279 ATXN8OSP0DMR3 200 aa14.02□□□□□ -0.17
SUCLA2-206ENST00000481279 ZBTB22O15209 634 aa13.99□□□□□ -0.17
SUCLA2-206ENST00000481279 POTEIP0CG38 1075 aa13.96□□□□□ -0.17
SUCLA2-206ENST00000481279 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
SUCLA2-206ENST00000481279 FBLN2P98095 1184 aa13.92□□□□□ -0.18
SUCLA2-206ENST00000481279 SSUH2Q9Y2M2 353 aa13.8□□□□□ -0.2
SUCLA2-206ENST00000481279 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
SUCLA2-206ENST00000481279 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
SUCLA2-206ENST00000481279 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
SUCLA2-206ENST00000481279 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
SUCLA2-206ENST00000481279 DCBLD2Q96PD2 775 aa13.7□□□□□ -0.22
SUCLA2-206ENST00000481279 CLCN6P51797 869 aa13.65□□□□□ -0.22
SUCLA2-206ENST00000481279 POTEMA6NI47 508 aa13.63□□□□□ -0.23
SUCLA2-206ENST00000481279 FARP1Q9Y4F1 1045 aaPredicted RBP13.62□□□□□ -0.23
SUCLA2-206ENST00000481279 OTUD5Q96G74 571 aa13.61□□□□□ -0.23
SUCLA2-206ENST00000481279 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
SUCLA2-206ENST00000481279 POTEGQ6S5H5 508 aa13.56□□□□□ -0.24
SUCLA2-206ENST00000481279 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
SUCLA2-206ENST00000481279 ZNF579Q8NAF0 562 aaKnown RBP13.49□□□□□ -0.25
SUCLA2-206ENST00000481279 ZRANB1Q9UGI0 708 aa13.44□□□□□ -0.26
SUCLA2-206ENST00000481279 GALR2O43603 387 aaPredicted RBP13.42□□□□□ -0.26
SUCLA2-206ENST00000481279 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
SUCLA2-206ENST00000481279 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
SUCLA2-206ENST00000481279 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
SUCLA2-206ENST00000481279 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
SUCLA2-206ENST00000481279 LCE2DQ5TA82 110 aaPredicted RBP13.17□□□□□ -0.3
SUCLA2-206ENST00000481279 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
SUCLA2-206ENST00000481279 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
SUCLA2-206ENST00000481279 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
SUCLA2-206ENST00000481279 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
SUCLA2-206ENST00000481279 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
SUCLA2-206ENST00000481279 MAMSTRQ6ZN01 415 aa13.08□□□□□ -0.32
SUCLA2-206ENST00000481279 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms