RNA–Protein interactions for RNA: ENST00000479773.1

DDX43-203, Transcript of DEAD-box helicase 43, humanhuman

TSL 3

Gene DDX43, Length 652 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43-203ENST00000479773 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
DDX43-203ENST00000479773 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
DDX43-203ENST00000479773 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
DDX43-203ENST00000479773 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
DDX43-203ENST00000479773 FOXD1Q16676 465 aa17.24■□□□□ 0.35
DDX43-203ENST00000479773 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
DDX43-203ENST00000479773 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
DDX43-203ENST00000479773 ADRA2BP18089 450 aa16.49■□□□□ 0.23
DDX43-203ENST00000479773 PIAS4Q8N2W9 510 aaPredicted RBP16.22■□□□□ 0.19
DDX43-203ENST00000479773 MSH5O43196 834 aa16.16■□□□□ 0.18
DDX43-203ENST00000479773 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
DDX43-203ENST00000479773 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
DDX43-203ENST00000479773 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
DDX43-203ENST00000479773 MAPK8IP2Q13387 824 aaPredicted RBP15□□□□□ -0.01
DDX43-203ENST00000479773 DMRT2Q9Y5R5 561 aa14.8□□□□□ -0.04
DDX43-203ENST00000479773 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
DDX43-203ENST00000479773 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
DDX43-203ENST00000479773 KCNA4P22459 653 aa14.67□□□□□ -0.06
DDX43-203ENST00000479773 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
DDX43-203ENST00000479773 RNF216Q9NWF9 866 aaPredicted RBP14.49□□□□□ -0.09
DDX43-203ENST00000479773 HOXD11P31277 338 aaPredicted RBP14.46□□□□□ -0.09
DDX43-203ENST00000479773 DCAF8L1A6NGE4 600 aa14.15□□□□□ -0.14
DDX43-203ENST00000479773 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
DDX43-203ENST00000479773 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
DDX43-203ENST00000479773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX43-203ENST00000479773 SLC4A2P04920 1241 aa13.73□□□□□ -0.21
DDX43-203ENST00000479773 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
DDX43-203ENST00000479773 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
DDX43-203ENST00000479773 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
DDX43-203ENST00000479773 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
DDX43-203ENST00000479773 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
DDX43-203ENST00000479773 ZBTB22O15209 634 aa13.5□□□□□ -0.25
DDX43-203ENST00000479773 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
DDX43-203ENST00000479773 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
DDX43-203ENST00000479773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.35□□□□□ -0.27
DDX43-203ENST00000479773 HNRNPUL2Q1KMD3 747 aaKnown RBP13.35□□□□□ -0.27
DDX43-203ENST00000479773 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
DDX43-203ENST00000479773 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
DDX43-203ENST00000479773 APLP2Q06481 763 aa13.25□□□□□ -0.29
DDX43-203ENST00000479773 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
DDX43-203ENST00000479773 CAPN15O75808 1086 aa13.14□□□□□ -0.31
DDX43-203ENST00000479773 ATXN8OSP0DMR3 200 aa13.1□□□□□ -0.31
DDX43-203ENST00000479773 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
DDX43-203ENST00000479773 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
DDX43-203ENST00000479773 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
DDX43-203ENST00000479773 DSG3P32926 999 aa12.96□□□□□ -0.33
DDX43-203ENST00000479773 ABCB7O75027 752 aa12.86□□□□□ -0.35
DDX43-203ENST00000479773 POLA2Q14181 598 aa12.83□□□□□ -0.36
DDX43-203ENST00000479773 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
DDX43-203ENST00000479773 FBLN2P98095 1184 aa12.51□□□□□ -0.41
DDX43-203ENST00000479773 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
DDX43-203ENST00000479773 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
DDX43-203ENST00000479773 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
DDX43-203ENST00000479773 SPDYE2BA6NHP3 402 aa12.26□□□□□ -0.45
DDX43-203ENST00000479773 SPDYE6P0CI01 402 aa12.26□□□□□ -0.45
DDX43-203ENST00000479773 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
DDX43-203ENST00000479773 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
DDX43-203ENST00000479773 AKT1S1Q96B36 256 aa12.18□□□□□ -0.46
DDX43-203ENST00000479773 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
DDX43-203ENST00000479773 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
DDX43-203ENST00000479773 FKBP8Q14318 412 aa12.06□□□□□ -0.48
DDX43-203ENST00000479773 REM2Q8IYK8 340 aaPredicted RBP12.06□□□□□ -0.48
DDX43-203ENST00000479773 PABPN1Q86U42 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
DDX43-203ENST00000479773 POTEHQ6S545 545 aa11.98□□□□□ -0.49
DDX43-203ENST00000479773 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
DDX43-203ENST00000479773 PROM2Q8N271 834 aa11.95□□□□□ -0.5
DDX43-203ENST00000479773 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
DDX43-203ENST00000479773 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
DDX43-203ENST00000479773 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
DDX43-203ENST00000479773 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
DDX43-203ENST00000479773 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
DDX43-203ENST00000479773 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX43-203ENST00000479773 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
DDX43-203ENST00000479773 FBXO3Q9UK99 471 aa11.68□□□□□ -0.54
DDX43-203ENST00000479773 PRKAR2AP13861 404 aaKnown RBP11.61□□□□□ -0.55
DDX43-203ENST00000479773 CHADLQ6NUI6 762 aa11.58□□□□□ -0.56
DDX43-203ENST00000479773 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
DDX43-203ENST00000479773 MIER1Q8N108 512 aa11.54□□□□□ -0.56
DDX43-203ENST00000479773 VASPP50552 380 aaPredicted RBP11.51□□□□□ -0.57
DDX43-203ENST00000479773 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
DDX43-203ENST00000479773 PLEKHG5O94827 1062 aa11.49□□□□□ -0.57
DDX43-203ENST00000479773 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
DDX43-203ENST00000479773 MNX1P50219 401 aaPredicted RBP11.45□□□□□ -0.58
DDX43-203ENST00000479773 HAX1O00165 279 aa11.44□□□□□ -0.58
DDX43-203ENST00000479773 NPM1P06748 294 aaKnown RBP eCLIP11.39□□□□□ -0.59
DDX43-203ENST00000479773 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
DDX43-203ENST00000479773 SP7Q8TDD2 431 aaPredicted RBP11.37□□□□□ -0.59
DDX43-203ENST00000479773 IFNLR1Q8IU57 520 aaPredicted RBP11.35□□□□□ -0.59
DDX43-203ENST00000479773 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
DDX43-203ENST00000479773 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
DDX43-203ENST00000479773 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
DDX43-203ENST00000479773 NUBP1P53384 320 aa11.27□□□□□ -0.61
DDX43-203ENST00000479773 EVX2Q03828 476 aa11.25□□□□□ -0.61
DDX43-203ENST00000479773 CLCN6P51797 869 aa11.24□□□□□ -0.61
DDX43-203ENST00000479773 SPOCK2Q92563 424 aa11.24□□□□□ -0.61
DDX43-203ENST00000479773 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
DDX43-203ENST00000479773 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
DDX43-203ENST00000479773 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
DDX43-203ENST00000479773 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
DDX43-203ENST00000479773 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms