RNA–Protein interactions for RNA: ENST00000476923.1

PEX1-206, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 3

Gene PEX1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-206ENST00000476923 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
PEX1-206ENST00000476923 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
PEX1-206ENST00000476923 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
PEX1-206ENST00000476923 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
PEX1-206ENST00000476923 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
PEX1-206ENST00000476923 FOXD1Q16676 465 aa18.1■□□□□ 0.49
PEX1-206ENST00000476923 MSH5O43196 834 aa17.14■□□□□ 0.33
PEX1-206ENST00000476923 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
PEX1-206ENST00000476923 PPP6R1Q9UPN7 881 aa16.37■□□□□ 0.21
PEX1-206ENST00000476923 ADRA2BP18089 450 aa16.26■□□□□ 0.19
PEX1-206ENST00000476923 PLPPR3Q6T4P5 718 aa16.05■□□□□ 0.16
PEX1-206ENST00000476923 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
PEX1-206ENST00000476923 MAPK8IP2Q13387 824 aaPredicted RBP15.19■□□□□ 0.02
PEX1-206ENST00000476923 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
PEX1-206ENST00000476923 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
PEX1-206ENST00000476923 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
PEX1-206ENST00000476923 DCAF8L1A6NGE4 600 aa14.59□□□□□ -0.07
PEX1-206ENST00000476923 C1QBPQ07021 282 aaKnown RBP14.3□□□□□ -0.12
PEX1-206ENST00000476923 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
PEX1-206ENST00000476923 POTEHQ6S545 545 aa14.04□□□□□ -0.16
PEX1-206ENST00000476923 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
PEX1-206ENST00000476923 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
PEX1-206ENST00000476923 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
PEX1-206ENST00000476923 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
PEX1-206ENST00000476923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.6□□□□□ -0.23
PEX1-206ENST00000476923 DSG3P32926 999 aa13.44□□□□□ -0.26
PEX1-206ENST00000476923 SPINK5Q9NQ38 1064 aaPredicted RBP13.35□□□□□ -0.27
PEX1-206ENST00000476923 CAPN15O75808 1086 aa13.31□□□□□ -0.28
PEX1-206ENST00000476923 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
PEX1-206ENST00000476923 NCBP3Q53F19 620 aaKnown RBP13.15□□□□□ -0.3
PEX1-206ENST00000476923 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
PEX1-206ENST00000476923 ABCB7O75027 752 aa12.98□□□□□ -0.33
PEX1-206ENST00000476923 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
PEX1-206ENST00000476923 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
PEX1-206ENST00000476923 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
PEX1-206ENST00000476923 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
PEX1-206ENST00000476923 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
PEX1-206ENST00000476923 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
PEX1-206ENST00000476923 APLP2Q06481 763 aa12.67□□□□□ -0.38
PEX1-206ENST00000476923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
PEX1-206ENST00000476923 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
PEX1-206ENST00000476923 SAMD1Q6SPF0 538 aaPredicted RBP12.43□□□□□ -0.42
PEX1-206ENST00000476923 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
PEX1-206ENST00000476923 POLA2Q14181 598 aa12.39□□□□□ -0.43
PEX1-206ENST00000476923 HAX1O00165 279 aa12.36□□□□□ -0.43
PEX1-206ENST00000476923 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
PEX1-206ENST00000476923 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
PEX1-206ENST00000476923 EVX2Q03828 476 aa12.24□□□□□ -0.45
PEX1-206ENST00000476923 FXR2P51116 673 aaKnown RBP eCLIP12.18□□□□□ -0.46
PEX1-206ENST00000476923 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
PEX1-206ENST00000476923 KCNA4P22459 653 aa12.15□□□□□ -0.46
PEX1-206ENST00000476923 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
PEX1-206ENST00000476923 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
PEX1-206ENST00000476923 LHX8Q68G74 356 aa11.99□□□□□ -0.49
PEX1-206ENST00000476923 ZBTB12Q9Y330 459 aaPredicted RBP11.98□□□□□ -0.49
PEX1-206ENST00000476923 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
PEX1-206ENST00000476923 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
PEX1-206ENST00000476923 GABBR2O75899 941 aa11.85□□□□□ -0.51
PEX1-206ENST00000476923 C19orf67A6NJJ6 358 aa11.82□□□□□ -0.52
PEX1-206ENST00000476923 PRKAR2AP13861 404 aaKnown RBP11.81□□□□□ -0.52
PEX1-206ENST00000476923 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
PEX1-206ENST00000476923 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
PEX1-206ENST00000476923 SPDYE2BA6NHP3 402 aa11.59□□□□□ -0.55
PEX1-206ENST00000476923 SPDYE6P0CI01 402 aa11.59□□□□□ -0.55
PEX1-206ENST00000476923 SPDYE2Q495Y8 402 aa11.59□□□□□ -0.55
PEX1-206ENST00000476923 SPDYE1Q8NFV5 336 aaPredicted RBP11.58□□□□□ -0.56
PEX1-206ENST00000476923 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
PEX1-206ENST00000476923 FOXD4L1Q9NU39 408 aa11.52□□□□□ -0.57
PEX1-206ENST00000476923 FBLN2P98095 1184 aa11.39□□□□□ -0.59
PEX1-206ENST00000476923 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
PEX1-206ENST00000476923 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
PEX1-206ENST00000476923 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
PEX1-206ENST00000476923 POTEMA6NI47 508 aa11.34□□□□□ -0.59
PEX1-206ENST00000476923 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
PEX1-206ENST00000476923 PRR29P0C7W0 189 aa11.32□□□□□ -0.6
PEX1-206ENST00000476923 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
PEX1-206ENST00000476923 DCBLD2Q96PD2 775 aa11.32□□□□□ -0.6
PEX1-206ENST00000476923 POTEGQ6S5H5 508 aa11.28□□□□□ -0.6
PEX1-206ENST00000476923 POTEB2H3BUK9 544 aa11.26□□□□□ -0.61
PEX1-206ENST00000476923 CLCN6P51797 869 aa11.26□□□□□ -0.61
PEX1-206ENST00000476923 SLC4A1APQ9BWU0 796 aaKnown RBP11.26□□□□□ -0.61
PEX1-206ENST00000476923 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
PEX1-206ENST00000476923 ZBTB22O15209 634 aa11.19□□□□□ -0.62
PEX1-206ENST00000476923 PABPN1Q86U42 306 aaKnown RBP eCLIP11.19□□□□□ -0.62
PEX1-206ENST00000476923 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
PEX1-206ENST00000476923 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
PEX1-206ENST00000476923 GALR2O43603 387 aaPredicted RBP11.14□□□□□ -0.63
PEX1-206ENST00000476923 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
PEX1-206ENST00000476923 PCDH10Q9P2E7 1040 aa11.09□□□□□ -0.63
PEX1-206ENST00000476923 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
PEX1-206ENST00000476923 PELP1Q8IZL8 1130 aaKnown RBP11.01□□□□□ -0.65
PEX1-206ENST00000476923 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
PEX1-206ENST00000476923 PHF12Q96QT6 1004 aa10.92□□□□□ -0.66
PEX1-206ENST00000476923 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
PEX1-206ENST00000476923 FAM163AQ96GL9 167 aaPredicted RBP10.89□□□□□ -0.67
PEX1-206ENST00000476923 METRNQ9UJH8 293 aa10.87□□□□□ -0.67
PEX1-206ENST00000476923 ASTLQ6HA08 431 aaPredicted RBP10.8□□□□□ -0.68
PEX1-206ENST00000476923 ATMINO43313 823 aaPredicted RBP10.78□□□□□ -0.68
PEX1-206ENST00000476923 MAMSTRQ6ZN01 415 aa10.78□□□□□ -0.68
PEX1-206ENST00000476923 PAK3O75914 559 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms