RNA–Protein interactions for RNA: ENST00000475817.1

CNTN4-214, Transcript of contactin 4, humanhuman

TSL 3

Gene CNTN4, Length 614 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-214ENST00000475817 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
CNTN4-214ENST00000475817 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
CNTN4-214ENST00000475817 PHF23Q9BUL5 403 aaPredicted RBP21.37■■□□□ 1.01
CNTN4-214ENST00000475817 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
CNTN4-214ENST00000475817 FOXD1Q16676 465 aa19.75■□□□□ 0.75
CNTN4-214ENST00000475817 PLPPR3Q6T4P5 718 aa19.58■□□□□ 0.72
CNTN4-214ENST00000475817 PPP6R1Q9UPN7 881 aa18.92■□□□□ 0.62
CNTN4-214ENST00000475817 ADRA2BP18089 450 aa18.87■□□□□ 0.61
CNTN4-214ENST00000475817 PIAS4Q8N2W9 510 aaPredicted RBP18.55■□□□□ 0.56
CNTN4-214ENST00000475817 MSH5O43196 834 aa18.2■□□□□ 0.5
CNTN4-214ENST00000475817 PPP4R3CPQ6ZMV5 832 aa17.27■□□□□ 0.36
CNTN4-214ENST00000475817 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
CNTN4-214ENST00000475817 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
CNTN4-214ENST00000475817 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
CNTN4-214ENST00000475817 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
CNTN4-214ENST00000475817 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
CNTN4-214ENST00000475817 KCNA4P22459 653 aa16.71■□□□□ 0.27
CNTN4-214ENST00000475817 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
CNTN4-214ENST00000475817 NPM3O75607 178 aaKnown RBP16.54■□□□□ 0.24
CNTN4-214ENST00000475817 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
CNTN4-214ENST00000475817 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
CNTN4-214ENST00000475817 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
CNTN4-214ENST00000475817 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
CNTN4-214ENST00000475817 SLC4A1APQ9BWU0 796 aaKnown RBP15.85■□□□□ 0.13
CNTN4-214ENST00000475817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.71■□□□□ 0.11
CNTN4-214ENST00000475817 SLC4A2P04920 1241 aa15.69■□□□□ 0.1
CNTN4-214ENST00000475817 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
CNTN4-214ENST00000475817 U3KPZ7 1027 aaPredicted RBP15.48■□□□□ 0.07
CNTN4-214ENST00000475817 ZBTB22O15209 634 aa15.4■□□□□ 0.06
CNTN4-214ENST00000475817 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
CNTN4-214ENST00000475817 FOXD4L1Q9NU39 408 aa15.38■□□□□ 0.05
CNTN4-214ENST00000475817 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
CNTN4-214ENST00000475817 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
CNTN4-214ENST00000475817 EHMT2Q96KQ7 1210 aa15.23■□□□□ 0.03
CNTN4-214ENST00000475817 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
CNTN4-214ENST00000475817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
CNTN4-214ENST00000475817 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
CNTN4-214ENST00000475817 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
CNTN4-214ENST00000475817 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
CNTN4-214ENST00000475817 CAPN15O75808 1086 aa15.01□□□□□ -0.01
CNTN4-214ENST00000475817 APLP2Q06481 763 aa14.99□□□□□ -0.01
CNTN4-214ENST00000475817 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
CNTN4-214ENST00000475817 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
CNTN4-214ENST00000475817 ZNF219Q9P2Y4 722 aaPredicted RBP14.85□□□□□ -0.03
CNTN4-214ENST00000475817 ATXN8OSP0DMR3 200 aa14.84□□□□□ -0.03
CNTN4-214ENST00000475817 DSG3P32926 999 aa14.82□□□□□ -0.04
CNTN4-214ENST00000475817 ABCB7O75027 752 aa14.74□□□□□ -0.05
CNTN4-214ENST00000475817 POLA2Q14181 598 aa14.64□□□□□ -0.07
CNTN4-214ENST00000475817 ZBTB12Q9Y330 459 aaPredicted RBP14.3□□□□□ -0.12
CNTN4-214ENST00000475817 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
CNTN4-214ENST00000475817 FBLN2P98095 1184 aa14.21□□□□□ -0.13
CNTN4-214ENST00000475817 OSCARQ8IYS5 282 aa14.15□□□□□ -0.14
CNTN4-214ENST00000475817 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
CNTN4-214ENST00000475817 SPDYE2BA6NHP3 402 aa13.94□□□□□ -0.18
CNTN4-214ENST00000475817 SPDYE6P0CI01 402 aa13.94□□□□□ -0.18
CNTN4-214ENST00000475817 SPDYE2Q495Y8 402 aa13.94□□□□□ -0.18
CNTN4-214ENST00000475817 ZNF692Q9BU19 519 aaPredicted RBP13.89□□□□□ -0.19
CNTN4-214ENST00000475817 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
CNTN4-214ENST00000475817 SSUH2Q9Y2M2 353 aa13.85□□□□□ -0.19
CNTN4-214ENST00000475817 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
CNTN4-214ENST00000475817 REM2Q8IYK8 340 aaPredicted RBP13.78□□□□□ -0.2
CNTN4-214ENST00000475817 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
CNTN4-214ENST00000475817 FKBP8Q14318 412 aa13.68□□□□□ -0.22
CNTN4-214ENST00000475817 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
CNTN4-214ENST00000475817 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
CNTN4-214ENST00000475817 PROM2Q8N271 834 aa13.58□□□□□ -0.24
CNTN4-214ENST00000475817 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
CNTN4-214ENST00000475817 CLEC11AQ9Y240 323 aa13.54□□□□□ -0.24
CNTN4-214ENST00000475817 FXR2P51116 673 aaKnown RBP eCLIP13.4□□□□□ -0.26
CNTN4-214ENST00000475817 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
CNTN4-214ENST00000475817 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
CNTN4-214ENST00000475817 PRR29P0C7W0 189 aa13.38□□□□□ -0.27
CNTN4-214ENST00000475817 POTEHQ6S545 545 aa13.35□□□□□ -0.27
CNTN4-214ENST00000475817 PRKAR2AP13861 404 aaKnown RBP13.27□□□□□ -0.29
CNTN4-214ENST00000475817 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
CNTN4-214ENST00000475817 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
CNTN4-214ENST00000475817 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
CNTN4-214ENST00000475817 MIER1Q8N108 512 aa13.11□□□□□ -0.31
CNTN4-214ENST00000475817 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
CNTN4-214ENST00000475817 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
CNTN4-214ENST00000475817 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
CNTN4-214ENST00000475817 PLCD3Q8N3E9 789 aa13.05□□□□□ -0.32
CNTN4-214ENST00000475817 HAX1O00165 279 aa12.99□□□□□ -0.33
CNTN4-214ENST00000475817 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
CNTN4-214ENST00000475817 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
CNTN4-214ENST00000475817 EVX2Q03828 476 aa12.95□□□□□ -0.34
CNTN4-214ENST00000475817 NPM1P06748 294 aaKnown RBP eCLIP12.93□□□□□ -0.34
CNTN4-214ENST00000475817 IFNLR1Q8IU57 520 aaPredicted RBP12.9□□□□□ -0.34
CNTN4-214ENST00000475817 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
CNTN4-214ENST00000475817 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
CNTN4-214ENST00000475817 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
CNTN4-214ENST00000475817 NUBP1P53384 320 aa12.83□□□□□ -0.36
CNTN4-214ENST00000475817 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
CNTN4-214ENST00000475817 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
CNTN4-214ENST00000475817 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
CNTN4-214ENST00000475817 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
CNTN4-214ENST00000475817 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
CNTN4-214ENST00000475817 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
CNTN4-214ENST00000475817 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
CNTN4-214ENST00000475817 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms