RNA–Protein interactions for RNA: ENST00000475438.1

ITGB6-207, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 354 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-207ENST00000475438 AEBP2Q6ZN18 517 aaPredicted RBP27.64■■■□□ 2.02
ITGB6-207ENST00000475438 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
ITGB6-207ENST00000475438 SENP3Q9H4L4 574 aaPredicted RBP23.43■■□□□ 1.34
ITGB6-207ENST00000475438 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
ITGB6-207ENST00000475438 FOXD1Q16676 465 aa22.07■■□□□ 1.12
ITGB6-207ENST00000475438 POTEDQ86YR6 584 aa21.42■■□□□ 1.02
ITGB6-207ENST00000475438 MSH5O43196 834 aa20.7■□□□□ 0.9
ITGB6-207ENST00000475438 PIAS4Q8N2W9 510 aaPredicted RBP20.4■□□□□ 0.86
ITGB6-207ENST00000475438 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
ITGB6-207ENST00000475438 ADRA2BP18089 450 aa20.1■□□□□ 0.81
ITGB6-207ENST00000475438 PLPPR3Q6T4P5 718 aa20.01■□□□□ 0.79
ITGB6-207ENST00000475438 MAPK8IP2Q13387 824 aaPredicted RBP18.7■□□□□ 0.58
ITGB6-207ENST00000475438 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
ITGB6-207ENST00000475438 CACNB1Q02641 598 aaPredicted RBP18.2■□□□□ 0.5
ITGB6-207ENST00000475438 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
ITGB6-207ENST00000475438 DCAF8L1A6NGE4 600 aa17.8■□□□□ 0.44
ITGB6-207ENST00000475438 RNF39Q9H2S5 420 aa17.72■□□□□ 0.43
ITGB6-207ENST00000475438 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
ITGB6-207ENST00000475438 PPP4R3CPQ6ZMV5 832 aa17.54■□□□□ 0.4
ITGB6-207ENST00000475438 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
ITGB6-207ENST00000475438 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
ITGB6-207ENST00000475438 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
ITGB6-207ENST00000475438 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
ITGB6-207ENST00000475438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
ITGB6-207ENST00000475438 POTEHQ6S545 545 aa16.61■□□□□ 0.25
ITGB6-207ENST00000475438 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
ITGB6-207ENST00000475438 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
ITGB6-207ENST00000475438 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
ITGB6-207ENST00000475438 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
ITGB6-207ENST00000475438 DSG3P32926 999 aa16.41■□□□□ 0.22
ITGB6-207ENST00000475438 CAPN15O75808 1086 aa16.3■□□□□ 0.2
ITGB6-207ENST00000475438 ABCB7O75027 752 aa15.97■□□□□ 0.15
ITGB6-207ENST00000475438 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
ITGB6-207ENST00000475438 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
ITGB6-207ENST00000475438 KCNA4P22459 653 aa15.92■□□□□ 0.14
ITGB6-207ENST00000475438 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
ITGB6-207ENST00000475438 APLP2Q06481 763 aa15.6■□□□□ 0.09
ITGB6-207ENST00000475438 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
ITGB6-207ENST00000475438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
ITGB6-207ENST00000475438 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
ITGB6-207ENST00000475438 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
ITGB6-207ENST00000475438 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
ITGB6-207ENST00000475438 POLA2Q14181 598 aa15.35■□□□□ 0.05
ITGB6-207ENST00000475438 SP7Q8TDD2 431 aaPredicted RBP15.27■□□□□ 0.04
ITGB6-207ENST00000475438 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
ITGB6-207ENST00000475438 AKT1S1Q96B36 256 aa15.08■□□□□ 0
ITGB6-207ENST00000475438 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
ITGB6-207ENST00000475438 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
ITGB6-207ENST00000475438 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
ITGB6-207ENST00000475438 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
ITGB6-207ENST00000475438 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
ITGB6-207ENST00000475438 HAX1O00165 279 aa14.9□□□□□ -0.02
ITGB6-207ENST00000475438 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
ITGB6-207ENST00000475438 FXR2P51116 673 aaKnown RBP eCLIP14.86□□□□□ -0.03
ITGB6-207ENST00000475438 EVX2Q03828 476 aa14.86□□□□□ -0.03
ITGB6-207ENST00000475438 ZBTB12Q9Y330 459 aaPredicted RBP14.81□□□□□ -0.04
ITGB6-207ENST00000475438 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
ITGB6-207ENST00000475438 ZBTB22O15209 634 aa14.66□□□□□ -0.06
ITGB6-207ENST00000475438 PRKAR2AP13861 404 aaKnown RBP14.46□□□□□ -0.09
ITGB6-207ENST00000475438 C19orf67A6NJJ6 358 aa14.41□□□□□ -0.1
ITGB6-207ENST00000475438 SPDYE2BA6NHP3 402 aa14.4□□□□□ -0.1
ITGB6-207ENST00000475438 SPDYE6P0CI01 402 aa14.4□□□□□ -0.1
ITGB6-207ENST00000475438 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
ITGB6-207ENST00000475438 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
ITGB6-207ENST00000475438 GABBR2O75899 941 aa14.36□□□□□ -0.11
ITGB6-207ENST00000475438 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
ITGB6-207ENST00000475438 LHX8Q68G74 356 aa14.31□□□□□ -0.12
ITGB6-207ENST00000475438 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
ITGB6-207ENST00000475438 EHMT2Q96KQ7 1210 aa14.3□□□□□ -0.12
ITGB6-207ENST00000475438 SPDYE1Q8NFV5 336 aaPredicted RBP14.28□□□□□ -0.12
ITGB6-207ENST00000475438 CHADLQ6NUI6 762 aa14.27□□□□□ -0.13
ITGB6-207ENST00000475438 FBLN2P98095 1184 aa14.24□□□□□ -0.13
ITGB6-207ENST00000475438 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
ITGB6-207ENST00000475438 SSUH2Q9Y2M2 353 aa14.22□□□□□ -0.13
ITGB6-207ENST00000475438 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
ITGB6-207ENST00000475438 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
ITGB6-207ENST00000475438 PRR29P0C7W0 189 aa13.99□□□□□ -0.17
ITGB6-207ENST00000475438 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
ITGB6-207ENST00000475438 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
ITGB6-207ENST00000475438 PLSCR2Q9NRY7 297 aa13.92□□□□□ -0.18
ITGB6-207ENST00000475438 FARP1Q9Y4F1 1045 aaPredicted RBP13.89□□□□□ -0.19
ITGB6-207ENST00000475438 DCBLD2Q96PD2 775 aa13.74□□□□□ -0.21
ITGB6-207ENST00000475438 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
ITGB6-207ENST00000475438 POTEB2H3BUK9 544 aa13.69□□□□□ -0.22
ITGB6-207ENST00000475438 OTUD5Q96G74 571 aa13.69□□□□□ -0.22
ITGB6-207ENST00000475438 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
ITGB6-207ENST00000475438 CLCN6P51797 869 aa13.67□□□□□ -0.22
ITGB6-207ENST00000475438 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
ITGB6-207ENST00000475438 CREBZFQ9NS37 354 aa13.62□□□□□ -0.23
ITGB6-207ENST00000475438 POTEMA6NI47 508 aa13.52□□□□□ -0.25
ITGB6-207ENST00000475438 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
ITGB6-207ENST00000475438 PHF12Q96QT6 1004 aa13.51□□□□□ -0.25
ITGB6-207ENST00000475438 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
ITGB6-207ENST00000475438 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
ITGB6-207ENST00000475438 MNX1P50219 401 aaPredicted RBP13.33□□□□□ -0.28
ITGB6-207ENST00000475438 LCE2DQ5TA82 110 aaPredicted RBP13.33□□□□□ -0.28
ITGB6-207ENST00000475438 MS4A3Q96HJ5 214 aa13.3□□□□□ -0.28
ITGB6-207ENST00000475438 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
ITGB6-207ENST00000475438 METRNQ9UJH8 293 aa13.29□□□□□ -0.28
ITGB6-207ENST00000475438 PAK3O75914 559 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms