RNA–Protein interactions for RNA: ENST00000474749.1

SYCP2-208, Transcript of synaptonemal complex protein 2, humanhuman

TSL 4

Gene SYCP2, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP2-208ENST00000474749 AEBP2Q6ZN18 517 aaPredicted RBP34.1■■■■□ 3.05
SYCP2-208ENST00000474749 CHIC1Q5VXU3 224 aa33.17■■■□□ 2.9
SYCP2-208ENST00000474749 PHF23Q9BUL5 403 aaPredicted RBP29.12■■■□□ 2.25
SYCP2-208ENST00000474749 SENP3Q9H4L4 574 aaPredicted RBP29.05■■■□□ 2.24
SYCP2-208ENST00000474749 PLPPR3Q6T4P5 718 aa26.94■■□□□ 1.9
SYCP2-208ENST00000474749 FOXD1Q16676 465 aa26.92■■□□□ 1.9
SYCP2-208ENST00000474749 ADRA2BP18089 450 aa25.73■■□□□ 1.71
SYCP2-208ENST00000474749 PPP6R1Q9UPN7 881 aa25.73■■□□□ 1.71
SYCP2-208ENST00000474749 PIAS4Q8N2W9 510 aaPredicted RBP25.33■■□□□ 1.65
SYCP2-208ENST00000474749 MSH5O43196 834 aa24.98■■□□□ 1.59
SYCP2-208ENST00000474749 PPP4R3CPQ6ZMV5 832 aa23.71■■□□□ 1.39
SYCP2-208ENST00000474749 SCAF1Q9H7N4 1312 aaKnown RBP23.64■■□□□ 1.38
SYCP2-208ENST00000474749 MAPK8IP2Q13387 824 aaPredicted RBP23.37■■□□□ 1.33
SYCP2-208ENST00000474749 DMRT2Q9Y5R5 561 aa23.15■■□□□ 1.3
SYCP2-208ENST00000474749 NCBP3Q53F19 620 aaKnown RBP23.13■■□□□ 1.29
SYCP2-208ENST00000474749 CNKSR2Q8WXI2 1034 aa23.08■■□□□ 1.29
SYCP2-208ENST00000474749 KCNA4P22459 653 aa23.02■■□□□ 1.28
SYCP2-208ENST00000474749 POTEDQ86YR6 584 aa23.02■■□□□ 1.28
SYCP2-208ENST00000474749 NPM3O75607 178 aaKnown RBP22.7■■□□□ 1.22
SYCP2-208ENST00000474749 RNF216Q9NWF9 866 aaPredicted RBP22.64■■□□□ 1.21
SYCP2-208ENST00000474749 HOXD11P31277 338 aaPredicted RBP22.62■■□□□ 1.21
SYCP2-208ENST00000474749 DCAF8L1A6NGE4 600 aa22.17■■□□□ 1.14
SYCP2-208ENST00000474749 DNAJC5BQ9UF47 199 aa22.15■■□□□ 1.14
SYCP2-208ENST00000474749 SLC4A1APQ9BWU0 796 aaKnown RBP21.96■■□□□ 1.11
SYCP2-208ENST00000474749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.58■■□□□ 1.05
SYCP2-208ENST00000474749 SLC4A2P04920 1241 aa21.43■■□□□ 1.02
SYCP2-208ENST00000474749 RNF39Q9H2S5 420 aa21.36■■□□□ 1.01
SYCP2-208ENST00000474749 FOXD4L1Q9NU39 408 aa21.25■□□□□ 0.99
SYCP2-208ENST00000474749 EHMT2Q96KQ7 1210 aa21.22■□□□□ 0.99
SYCP2-208ENST00000474749 ZBTB22O15209 634 aa21.14■□□□□ 0.97
SYCP2-208ENST00000474749 U3KPZ7 1027 aaPredicted RBP21.13■□□□□ 0.97
SYCP2-208ENST00000474749 C1QBPQ07021 282 aaKnown RBP21.12■□□□□ 0.97
SYCP2-208ENST00000474749 MYCNP04198 464 aaPredicted RBP21.01■□□□□ 0.95
SYCP2-208ENST00000474749 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
SYCP2-208ENST00000474749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.93■□□□□ 0.94
SYCP2-208ENST00000474749 HNRNPUL2Q1KMD3 747 aaKnown RBP20.93■□□□□ 0.94
SYCP2-208ENST00000474749 CACNB1Q02641 598 aaPredicted RBP20.88■□□□□ 0.93
SYCP2-208ENST00000474749 SAMD1Q6SPF0 538 aaPredicted RBP20.83■□□□□ 0.93
SYCP2-208ENST00000474749 APLP2Q06481 763 aa20.75■□□□□ 0.91
SYCP2-208ENST00000474749 SPINK5Q9NQ38 1064 aaPredicted RBP20.57■□□□□ 0.88
SYCP2-208ENST00000474749 CAPN15O75808 1086 aa20.56■□□□□ 0.88
SYCP2-208ENST00000474749 ATXN8OSP0DMR3 200 aa20.53■□□□□ 0.88
SYCP2-208ENST00000474749 TRHP20396 242 aaPredicted RBP20.44■□□□□ 0.86
SYCP2-208ENST00000474749 ZNF219Q9P2Y4 722 aaPredicted RBP20.43■□□□□ 0.86
SYCP2-208ENST00000474749 ATF5Q9Y2D1 282 aaPredicted RBP20.39■□□□□ 0.85
SYCP2-208ENST00000474749 DSG3P32926 999 aa20.23■□□□□ 0.83
SYCP2-208ENST00000474749 ABCB7O75027 752 aa20.13■□□□□ 0.81
SYCP2-208ENST00000474749 POLA2Q14181 598 aa20.07■□□□□ 0.8
SYCP2-208ENST00000474749 ZBTB12Q9Y330 459 aaPredicted RBP19.77■□□□□ 0.76
SYCP2-208ENST00000474749 FBLN2P98095 1184 aa19.66■□□□□ 0.74
SYCP2-208ENST00000474749 MKRN4PQ13434 485 aaPredicted RBP19.5■□□□□ 0.71
SYCP2-208ENST00000474749 OSCARQ8IYS5 282 aa19.37■□□□□ 0.69
SYCP2-208ENST00000474749 RBM42Q9BTD8 480 aaKnown RBP19.34■□□□□ 0.69
SYCP2-208ENST00000474749 SPDYE2BA6NHP3 402 aa19.2■□□□□ 0.66
SYCP2-208ENST00000474749 SPDYE6P0CI01 402 aa19.2■□□□□ 0.66
SYCP2-208ENST00000474749 SPDYE2Q495Y8 402 aa19.2■□□□□ 0.66
SYCP2-208ENST00000474749 ZNF692Q9BU19 519 aaPredicted RBP19.13■□□□□ 0.65
SYCP2-208ENST00000474749 SPDYE4A6NLX3 237 aa19.1■□□□□ 0.65
SYCP2-208ENST00000474749 AKT1S1Q96B36 256 aa19.04■□□□□ 0.64
SYCP2-208ENST00000474749 FKBP8Q14318 412 aa19.02■□□□□ 0.64
SYCP2-208ENST00000474749 SSUH2Q9Y2M2 353 aa18.99■□□□□ 0.63
SYCP2-208ENST00000474749 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
SYCP2-208ENST00000474749 REM2Q8IYK8 340 aaPredicted RBP18.82■□□□□ 0.6
SYCP2-208ENST00000474749 PROM2Q8N271 834 aa18.68■□□□□ 0.58
SYCP2-208ENST00000474749 SPDYE1Q8NFV5 336 aaPredicted RBP18.67■□□□□ 0.58
SYCP2-208ENST00000474749 CLEC11AQ9Y240 323 aa18.61■□□□□ 0.57
SYCP2-208ENST00000474749 PITPNM1O00562 1244 aa18.6■□□□□ 0.57
SYCP2-208ENST00000474749 STAG3Q9UJ98 1225 aa18.57■□□□□ 0.56
SYCP2-208ENST00000474749 CHRDL2Q6WN34 429 aa18.56■□□□□ 0.56
SYCP2-208ENST00000474749 PRR29P0C7W0 189 aa18.43■□□□□ 0.54
SYCP2-208ENST00000474749 FBXO3Q9UK99 471 aa18.43■□□□□ 0.54
SYCP2-208ENST00000474749 FXR2P51116 673 aaKnown RBP eCLIP18.33■□□□□ 0.52
SYCP2-208ENST00000474749 PIP4P2Q8N4L2 257 aa18.27■□□□□ 0.52
SYCP2-208ENST00000474749 POTEHQ6S545 545 aa18.19■□□□□ 0.5
SYCP2-208ENST00000474749 MIER1Q8N108 512 aa18.16■□□□□ 0.5
SYCP2-208ENST00000474749 PRKAR2AP13861 404 aaKnown RBP18.15■□□□□ 0.5
SYCP2-208ENST00000474749 PLCD3Q8N3E9 789 aa18.14■□□□□ 0.49
SYCP2-208ENST00000474749 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
SYCP2-208ENST00000474749 VASPP50552 380 aaPredicted RBP18.11■□□□□ 0.49
SYCP2-208ENST00000474749 CHADLQ6NUI6 762 aa18.11■□□□□ 0.49
SYCP2-208ENST00000474749 CREBZFQ9NS37 354 aa18.1■□□□□ 0.49
SYCP2-208ENST00000474749 FARP1Q9Y4F1 1045 aaPredicted RBP17.95■□□□□ 0.46
SYCP2-208ENST00000474749 ZBTB47Q9UFB7 747 aaPredicted RBP17.94■□□□□ 0.46
SYCP2-208ENST00000474749 KLHL34Q8N239 644 aa17.91■□□□□ 0.46
SYCP2-208ENST00000474749 NPM1P06748 294 aaKnown RBP eCLIP17.89■□□□□ 0.45
SYCP2-208ENST00000474749 MNX1P50219 401 aaPredicted RBP17.86■□□□□ 0.45
SYCP2-208ENST00000474749 IFNLR1Q8IU57 520 aaPredicted RBP17.83■□□□□ 0.44
SYCP2-208ENST00000474749 HAX1O00165 279 aa17.73■□□□□ 0.43
SYCP2-208ENST00000474749 C19orf67A6NJJ6 358 aa17.71■□□□□ 0.43
SYCP2-208ENST00000474749 SPOCK2Q92563 424 aa17.7■□□□□ 0.42
SYCP2-208ENST00000474749 CD44P16070 742 aaKnown RBP17.63■□□□□ 0.41
SYCP2-208ENST00000474749 PAK3O75914 559 aaPredicted RBP17.62■□□□□ 0.41
SYCP2-208ENST00000474749 NUBP1P53384 320 aa17.62■□□□□ 0.41
SYCP2-208ENST00000474749 RASEFQ8IZ41 740 aa17.58■□□□□ 0.4
SYCP2-208ENST00000474749 FAM212AQ96EL1 285 aa17.56■□□□□ 0.4
SYCP2-208ENST00000474749 TSPYL2Q9H2G4 693 aaPredicted RBP17.56■□□□□ 0.4
SYCP2-208ENST00000474749 DCAF8Q5TAQ9 597 aa17.53■□□□□ 0.4
SYCP2-208ENST00000474749 ZRANB1Q9UGI0 708 aa17.53■□□□□ 0.4
SYCP2-208ENST00000474749 EVX2Q03828 476 aa17.51■□□□□ 0.39
SYCP2-208ENST00000474749 GSE1Q14687 1217 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms