RNA–Protein interactions for RNA: ENST00000474292.1

KIFAP3-204, Transcript of kinesin associated protein 3, humanhuman

TSL 3

Gene KIFAP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFAP3-204ENST00000474292 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
KIFAP3-204ENST00000474292 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
KIFAP3-204ENST00000474292 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
KIFAP3-204ENST00000474292 PHF23Q9BUL5 403 aaPredicted RBP20.86■□□□□ 0.93
KIFAP3-204ENST00000474292 FOXD1Q16676 465 aa19.87■□□□□ 0.77
KIFAP3-204ENST00000474292 POTEDQ86YR6 584 aa19.49■□□□□ 0.71
KIFAP3-204ENST00000474292 MSH5O43196 834 aa18.82■□□□□ 0.6
KIFAP3-204ENST00000474292 PIAS4Q8N2W9 510 aaPredicted RBP18.4■□□□□ 0.54
KIFAP3-204ENST00000474292 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
KIFAP3-204ENST00000474292 ADRA2BP18089 450 aa17.99■□□□□ 0.47
KIFAP3-204ENST00000474292 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
KIFAP3-204ENST00000474292 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
KIFAP3-204ENST00000474292 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
KIFAP3-204ENST00000474292 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
KIFAP3-204ENST00000474292 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
KIFAP3-204ENST00000474292 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
KIFAP3-204ENST00000474292 RNF39Q9H2S5 420 aa16.01■□□□□ 0.15
KIFAP3-204ENST00000474292 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
KIFAP3-204ENST00000474292 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
KIFAP3-204ENST00000474292 PPP4R3CPQ6ZMV5 832 aa15.7■□□□□ 0.1
KIFAP3-204ENST00000474292 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
KIFAP3-204ENST00000474292 CNKSR2Q8WXI2 1034 aa15.54■□□□□ 0.08
KIFAP3-204ENST00000474292 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
KIFAP3-204ENST00000474292 POTEHQ6S545 545 aa15.13■□□□□ 0.01
KIFAP3-204ENST00000474292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.01
KIFAP3-204ENST00000474292 NCBP3Q53F19 620 aaKnown RBP14.86□□□□□ -0.03
KIFAP3-204ENST00000474292 DSG3P32926 999 aa14.79□□□□□ -0.04
KIFAP3-204ENST00000474292 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
KIFAP3-204ENST00000474292 SPINK5Q9NQ38 1064 aaPredicted RBP14.72□□□□□ -0.05
KIFAP3-204ENST00000474292 NPM3O75607 178 aaKnown RBP14.7□□□□□ -0.06
KIFAP3-204ENST00000474292 CAPN15O75808 1086 aa14.7□□□□□ -0.06
KIFAP3-204ENST00000474292 ABCB7O75027 752 aa14.32□□□□□ -0.12
KIFAP3-204ENST00000474292 TRHP20396 242 aaPredicted RBP14.32□□□□□ -0.12
KIFAP3-204ENST00000474292 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
KIFAP3-204ENST00000474292 SLC4A2P04920 1241 aa14.21□□□□□ -0.13
KIFAP3-204ENST00000474292 APLP2Q06481 763 aa14.2□□□□□ -0.14
KIFAP3-204ENST00000474292 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
KIFAP3-204ENST00000474292 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
KIFAP3-204ENST00000474292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.05□□□□□ -0.16
KIFAP3-204ENST00000474292 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
KIFAP3-204ENST00000474292 SAMD1Q6SPF0 538 aaPredicted RBP13.95□□□□□ -0.18
KIFAP3-204ENST00000474292 SP7Q8TDD2 431 aaPredicted RBP13.88□□□□□ -0.19
KIFAP3-204ENST00000474292 KCNA4P22459 653 aa13.85□□□□□ -0.19
KIFAP3-204ENST00000474292 POLA2Q14181 598 aa13.79□□□□□ -0.2
KIFAP3-204ENST00000474292 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
KIFAP3-204ENST00000474292 MYCNP04198 464 aaPredicted RBP13.59□□□□□ -0.23
KIFAP3-204ENST00000474292 PIP4P2Q8N4L2 257 aa13.59□□□□□ -0.23
KIFAP3-204ENST00000474292 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
KIFAP3-204ENST00000474292 HAX1O00165 279 aa13.51□□□□□ -0.25
KIFAP3-204ENST00000474292 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
KIFAP3-204ENST00000474292 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
KIFAP3-204ENST00000474292 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
KIFAP3-204ENST00000474292 OSCARQ8IYS5 282 aa13.39□□□□□ -0.27
KIFAP3-204ENST00000474292 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
KIFAP3-204ENST00000474292 EVX2Q03828 476 aa13.33□□□□□ -0.28
KIFAP3-204ENST00000474292 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
KIFAP3-204ENST00000474292 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
KIFAP3-204ENST00000474292 LHX8Q68G74 356 aa13.01□□□□□ -0.33
KIFAP3-204ENST00000474292 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
KIFAP3-204ENST00000474292 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
KIFAP3-204ENST00000474292 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
KIFAP3-204ENST00000474292 SPDYE2Q495Y8 402 aa12.98□□□□□ -0.33
KIFAP3-204ENST00000474292 GABBR2O75899 941 aa12.97□□□□□ -0.33
KIFAP3-204ENST00000474292 CLEC11AQ9Y240 323 aa12.93□□□□□ -0.34
KIFAP3-204ENST00000474292 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
KIFAP3-204ENST00000474292 SPDYE1Q8NFV5 336 aaPredicted RBP12.91□□□□□ -0.34
KIFAP3-204ENST00000474292 FBLN2P98095 1184 aa12.83□□□□□ -0.36
KIFAP3-204ENST00000474292 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
KIFAP3-204ENST00000474292 ATXN8OSP0DMR3 200 aa12.75□□□□□ -0.37
KIFAP3-204ENST00000474292 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
KIFAP3-204ENST00000474292 ZBTB22O15209 634 aa12.73□□□□□ -0.37
KIFAP3-204ENST00000474292 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
KIFAP3-204ENST00000474292 POTEIP0CG38 1075 aa12.71□□□□□ -0.37
KIFAP3-204ENST00000474292 MKRN4PQ13434 485 aaPredicted RBP12.71□□□□□ -0.37
KIFAP3-204ENST00000474292 PLSCR2Q9NRY7 297 aa12.71□□□□□ -0.37
KIFAP3-204ENST00000474292 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
KIFAP3-204ENST00000474292 CD44P16070 742 aaKnown RBP12.59□□□□□ -0.39
KIFAP3-204ENST00000474292 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
KIFAP3-204ENST00000474292 CLCN6P51797 869 aa12.51□□□□□ -0.41
KIFAP3-204ENST00000474292 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
KIFAP3-204ENST00000474292 DCBLD2Q96PD2 775 aa12.47□□□□□ -0.41
KIFAP3-204ENST00000474292 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.41
KIFAP3-204ENST00000474292 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
KIFAP3-204ENST00000474292 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
KIFAP3-204ENST00000474292 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
KIFAP3-204ENST00000474292 POTEMA6NI47 508 aa12.29□□□□□ -0.44
KIFAP3-204ENST00000474292 POTEB2H3BUK9 544 aa12.29□□□□□ -0.44
KIFAP3-204ENST00000474292 GALR2O43603 387 aaPredicted RBP12.27□□□□□ -0.45
KIFAP3-204ENST00000474292 POTEGQ6S5H5 508 aa12.23□□□□□ -0.45
KIFAP3-204ENST00000474292 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
KIFAP3-204ENST00000474292 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
KIFAP3-204ENST00000474292 PELP1Q8IZL8 1130 aaKnown RBP12.1□□□□□ -0.47
KIFAP3-204ENST00000474292 PHF12Q96QT6 1004 aa12.1□□□□□ -0.47
KIFAP3-204ENST00000474292 PCDH10Q9P2E7 1040 aa12.1□□□□□ -0.47
KIFAP3-204ENST00000474292 PAK3O75914 559 aaPredicted RBP12.04□□□□□ -0.48
KIFAP3-204ENST00000474292 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
KIFAP3-204ENST00000474292 POTEJP0CG39 1038 aa12□□□□□ -0.49
KIFAP3-204ENST00000474292 METRNQ9UJH8 293 aa12□□□□□ -0.49
KIFAP3-204ENST00000474292 LCE2DQ5TA82 110 aaPredicted RBP11.97□□□□□ -0.49
KIFAP3-204ENST00000474292 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms