RNA–Protein interactions for RNA: ENST00000473871.1

SUPT20H-211, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 2

Gene SUPT20H, Length 2,028 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-211ENST00000473871 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
SUPT20H-211ENST00000473871 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
SUPT20H-211ENST00000473871 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
SUPT20H-211ENST00000473871 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
SUPT20H-211ENST00000473871 FOXD1Q16676 465 aa15.44■□□□□ 0.06
SUPT20H-211ENST00000473871 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
SUPT20H-211ENST00000473871 MSH5O43196 834 aa14.87□□□□□ -0.03
SUPT20H-211ENST00000473871 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
SUPT20H-211ENST00000473871 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
SUPT20H-211ENST00000473871 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
SUPT20H-211ENST00000473871 ADRA2BP18089 450 aa13.84□□□□□ -0.19
SUPT20H-211ENST00000473871 CACNB1Q02641 598 aaPredicted RBP13.07□□□□□ -0.32
SUPT20H-211ENST00000473871 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
SUPT20H-211ENST00000473871 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
SUPT20H-211ENST00000473871 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
SUPT20H-211ENST00000473871 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.4
SUPT20H-211ENST00000473871 RNF39Q9H2S5 420 aa12.52□□□□□ -0.41
SUPT20H-211ENST00000473871 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.42
SUPT20H-211ENST00000473871 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
SUPT20H-211ENST00000473871 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
SUPT20H-211ENST00000473871 RNF216Q9NWF9 866 aaPredicted RBP12.11□□□□□ -0.47
SUPT20H-211ENST00000473871 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
SUPT20H-211ENST00000473871 CNKSR2Q8WXI2 1034 aa12.07□□□□□ -0.48
SUPT20H-211ENST00000473871 POTEHQ6S545 545 aa11.98□□□□□ -0.49
SUPT20H-211ENST00000473871 KCNA4P22459 653 aa11.85□□□□□ -0.51
SUPT20H-211ENST00000473871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.52
SUPT20H-211ENST00000473871 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
SUPT20H-211ENST00000473871 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
SUPT20H-211ENST00000473871 DSG3P32926 999 aa11.5□□□□□ -0.57
SUPT20H-211ENST00000473871 CAPN15O75808 1086 aa11.46□□□□□ -0.57
SUPT20H-211ENST00000473871 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
SUPT20H-211ENST00000473871 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
SUPT20H-211ENST00000473871 APLP2Q06481 763 aa11.28□□□□□ -0.6
SUPT20H-211ENST00000473871 SLC4A1APQ9BWU0 796 aaKnown RBP11.28□□□□□ -0.6
SUPT20H-211ENST00000473871 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
SUPT20H-211ENST00000473871 RBM42Q9BTD8 480 aaKnown RBP11.15□□□□□ -0.62
SUPT20H-211ENST00000473871 TRHP20396 242 aaPredicted RBP11.09□□□□□ -0.63
SUPT20H-211ENST00000473871 ABCB7O75027 752 aa11.06□□□□□ -0.64
SUPT20H-211ENST00000473871 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
SUPT20H-211ENST00000473871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.04□□□□□ -0.64
SUPT20H-211ENST00000473871 HNRNPUL2Q1KMD3 747 aaKnown RBP11.04□□□□□ -0.64
SUPT20H-211ENST00000473871 CHRDL2Q6WN34 429 aa11.02□□□□□ -0.65
SUPT20H-211ENST00000473871 SP7Q8TDD2 431 aaPredicted RBP10.96□□□□□ -0.65
SUPT20H-211ENST00000473871 ZBTB22O15209 634 aa10.92□□□□□ -0.66
SUPT20H-211ENST00000473871 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
SUPT20H-211ENST00000473871 SAMD1Q6SPF0 538 aaPredicted RBP10.9□□□□□ -0.66
SUPT20H-211ENST00000473871 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.66
SUPT20H-211ENST00000473871 FOXD4L1Q9NU39 408 aa10.87□□□□□ -0.67
SUPT20H-211ENST00000473871 AKT1S1Q96B36 256 aa10.72□□□□□ -0.69
SUPT20H-211ENST00000473871 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
SUPT20H-211ENST00000473871 POLA2Q14181 598 aa10.64□□□□□ -0.71
SUPT20H-211ENST00000473871 HAX1O00165 279 aa10.61□□□□□ -0.71
SUPT20H-211ENST00000473871 PIP4P2Q8N4L2 257 aa10.6□□□□□ -0.71
SUPT20H-211ENST00000473871 ZBTB12Q9Y330 459 aaPredicted RBP10.58□□□□□ -0.72
SUPT20H-211ENST00000473871 REM2Q8IYK8 340 aaPredicted RBP10.53□□□□□ -0.72
SUPT20H-211ENST00000473871 FXR2P51116 673 aaKnown RBP eCLIP10.48□□□□□ -0.73
SUPT20H-211ENST00000473871 ATXN8OSP0DMR3 200 aa10.46□□□□□ -0.73
SUPT20H-211ENST00000473871 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
SUPT20H-211ENST00000473871 PITPNM1O00562 1244 aa10.4□□□□□ -0.74
SUPT20H-211ENST00000473871 OSCARQ8IYS5 282 aa10.31□□□□□ -0.76
SUPT20H-211ENST00000473871 LHX8Q68G74 356 aa10.28□□□□□ -0.76
SUPT20H-211ENST00000473871 EVX2Q03828 476 aa10.28□□□□□ -0.76
SUPT20H-211ENST00000473871 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
SUPT20H-211ENST00000473871 PRKAR2AP13861 404 aaKnown RBP10.16□□□□□ -0.78
SUPT20H-211ENST00000473871 GABBR2O75899 941 aa10.14□□□□□ -0.79
SUPT20H-211ENST00000473871 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
SUPT20H-211ENST00000473871 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
SUPT20H-211ENST00000473871 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
SUPT20H-211ENST00000473871 SPDYE1Q8NFV5 336 aaPredicted RBP10.11□□□□□ -0.79
SUPT20H-211ENST00000473871 PLSCR2Q9NRY7 297 aa10.11□□□□□ -0.79
SUPT20H-211ENST00000473871 CLEC11AQ9Y240 323 aa10.02□□□□□ -0.8
SUPT20H-211ENST00000473871 FBLN2P98095 1184 aa10.02□□□□□ -0.81
SUPT20H-211ENST00000473871 CLCN6P51797 869 aa9.99□□□□□ -0.81
SUPT20H-211ENST00000473871 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
SUPT20H-211ENST00000473871 SSUH2Q9Y2M2 353 aa9.86□□□□□ -0.83
SUPT20H-211ENST00000473871 POTEIP0CG38 1075 aa9.85□□□□□ -0.83
SUPT20H-211ENST00000473871 ZNF692Q9BU19 519 aaPredicted RBP9.85□□□□□ -0.83
SUPT20H-211ENST00000473871 FKBP8Q14318 412 aa9.84□□□□□ -0.83
SUPT20H-211ENST00000473871 CHADLQ6NUI6 762 aa9.83□□□□□ -0.84
SUPT20H-211ENST00000473871 PRR29P0C7W0 189 aa9.82□□□□□ -0.84
SUPT20H-211ENST00000473871 CD44P16070 742 aaKnown RBP9.81□□□□□ -0.84
SUPT20H-211ENST00000473871 DCBLD2Q96PD2 775 aa9.81□□□□□ -0.84
SUPT20H-211ENST00000473871 SPDYE4A6NLX3 237 aa9.76□□□□□ -0.85
SUPT20H-211ENST00000473871 PCDH10Q9P2E7 1040 aa9.75□□□□□ -0.85
SUPT20H-211ENST00000473871 FARP1Q9Y4F1 1045 aaPredicted RBP9.71□□□□□ -0.86
SUPT20H-211ENST00000473871 POTEMA6NI47 508 aa9.67□□□□□ -0.86
SUPT20H-211ENST00000473871 ZNF579Q8NAF0 562 aaKnown RBP9.67□□□□□ -0.86
SUPT20H-211ENST00000473871 PABPN1Q86U42 306 aaKnown RBP eCLIP9.65□□□□□ -0.86
SUPT20H-211ENST00000473871 POTEGQ6S5H5 508 aa9.63□□□□□ -0.87
SUPT20H-211ENST00000473871 OTUD5Q96G74 571 aa9.63□□□□□ -0.87
SUPT20H-211ENST00000473871 PROM2Q8N271 834 aa9.61□□□□□ -0.87
SUPT20H-211ENST00000473871 ZRANB1Q9UGI0 708 aa9.58□□□□□ -0.88
SUPT20H-211ENST00000473871 MAMSTRQ6ZN01 415 aa9.49□□□□□ -0.89
SUPT20H-211ENST00000473871 PAK3O75914 559 aaPredicted RBP9.49□□□□□ -0.89
SUPT20H-211ENST00000473871 GALR2O43603 387 aaPredicted RBP9.48□□□□□ -0.89
SUPT20H-211ENST00000473871 POTEB2H3BUK9 544 aa9.46□□□□□ -0.89
SUPT20H-211ENST00000473871 FBXO3Q9UK99 471 aa9.45□□□□□ -0.9
SUPT20H-211ENST00000473871 STAG3Q9UJ98 1225 aa9.43□□□□□ -0.9
SUPT20H-211ENST00000473871 SLC39A7Q92504 469 aa9.39□□□□□ -0.91
SUPT20H-211ENST00000473871 C7P10643 843 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms