RNA–Protein interactions for RNA: ENST00000473058.1

CNTN4-211, Transcript of contactin 4, humanhuman

TSL 4

Gene CNTN4, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-211ENST00000473058 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
CNTN4-211ENST00000473058 CHIC1Q5VXU3 224 aa17.52■□□□□ 0.4
CNTN4-211ENST00000473058 PHF23Q9BUL5 403 aaPredicted RBP15.37■□□□□ 0.05
CNTN4-211ENST00000473058 SENP3Q9H4L4 574 aaPredicted RBP15.35■□□□□ 0.05
CNTN4-211ENST00000473058 FOXD1Q16676 465 aa14.23□□□□□ -0.13
CNTN4-211ENST00000473058 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
CNTN4-211ENST00000473058 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
CNTN4-211ENST00000473058 ADRA2BP18089 450 aa13.55□□□□□ -0.24
CNTN4-211ENST00000473058 PIAS4Q8N2W9 510 aaPredicted RBP13.38□□□□□ -0.27
CNTN4-211ENST00000473058 MSH5O43196 834 aa13.2□□□□□ -0.3
CNTN4-211ENST00000473058 SCAF1Q9H7N4 1312 aaKnown RBP12.47□□□□□ -0.41
CNTN4-211ENST00000473058 PPP4R3CPQ6ZMV5 832 aa12.47□□□□□ -0.41
CNTN4-211ENST00000473058 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
CNTN4-211ENST00000473058 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
CNTN4-211ENST00000473058 POTEDQ86YR6 584 aa12.18□□□□□ -0.46
CNTN4-211ENST00000473058 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
CNTN4-211ENST00000473058 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
CNTN4-211ENST00000473058 KCNA4P22459 653 aa12.02□□□□□ -0.49
CNTN4-211ENST00000473058 RNF216Q9NWF9 866 aaPredicted RBP11.97□□□□□ -0.49
CNTN4-211ENST00000473058 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
CNTN4-211ENST00000473058 NPM3O75607 178 aaKnown RBP11.92□□□□□ -0.5
CNTN4-211ENST00000473058 DNAJC5BQ9UF47 199 aa11.7□□□□□ -0.54
CNTN4-211ENST00000473058 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
CNTN4-211ENST00000473058 SLC4A1APQ9BWU0 796 aaKnown RBP11.44□□□□□ -0.58
CNTN4-211ENST00000473058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
CNTN4-211ENST00000473058 SLC4A2P04920 1241 aa11.29□□□□□ -0.6
CNTN4-211ENST00000473058 RNF39Q9H2S5 420 aa11.29□□□□□ -0.6
CNTN4-211ENST00000473058 C1QBPQ07021 282 aaKnown RBP11.17□□□□□ -0.62
CNTN4-211ENST00000473058 U3KPZ7 1027 aaPredicted RBP11.16□□□□□ -0.62
CNTN4-211ENST00000473058 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
CNTN4-211ENST00000473058 ZBTB22O15209 634 aa11.05□□□□□ -0.64
CNTN4-211ENST00000473058 CACNB1Q02641 598 aaPredicted RBP11.05□□□□□ -0.64
CNTN4-211ENST00000473058 MYCNP04198 464 aaPredicted RBP11.04□□□□□ -0.64
CNTN4-211ENST00000473058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.02□□□□□ -0.65
CNTN4-211ENST00000473058 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
CNTN4-211ENST00000473058 SAMD1Q6SPF0 538 aaPredicted RBP10.96□□□□□ -0.65
CNTN4-211ENST00000473058 APLP2Q06481 763 aa10.94□□□□□ -0.66
CNTN4-211ENST00000473058 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
CNTN4-211ENST00000473058 CSRNP3Q8WYN3 585 aa10.92□□□□□ -0.66
CNTN4-211ENST00000473058 SPINK5Q9NQ38 1064 aaPredicted RBP10.85□□□□□ -0.67
CNTN4-211ENST00000473058 CAPN15O75808 1086 aa10.82□□□□□ -0.68
CNTN4-211ENST00000473058 ATXN8OSP0DMR3 200 aa10.8□□□□□ -0.68
CNTN4-211ENST00000473058 ZNF219Q9P2Y4 722 aaPredicted RBP10.77□□□□□ -0.69
CNTN4-211ENST00000473058 TRHP20396 242 aaPredicted RBP10.73□□□□□ -0.69
CNTN4-211ENST00000473058 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
CNTN4-211ENST00000473058 DSG3P32926 999 aa10.69□□□□□ -0.7
CNTN4-211ENST00000473058 ABCB7O75027 752 aa10.58□□□□□ -0.72
CNTN4-211ENST00000473058 POLA2Q14181 598 aa10.56□□□□□ -0.72
CNTN4-211ENST00000473058 ZBTB12Q9Y330 459 aaPredicted RBP10.42□□□□□ -0.74
CNTN4-211ENST00000473058 FBLN2P98095 1184 aa10.31□□□□□ -0.76
CNTN4-211ENST00000473058 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
CNTN4-211ENST00000473058 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
CNTN4-211ENST00000473058 OSCARQ8IYS5 282 aa10.18□□□□□ -0.78
CNTN4-211ENST00000473058 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
CNTN4-211ENST00000473058 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
CNTN4-211ENST00000473058 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
CNTN4-211ENST00000473058 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
CNTN4-211ENST00000473058 ZNF692Q9BU19 519 aaPredicted RBP10.03□□□□□ -0.8
CNTN4-211ENST00000473058 SSUH2Q9Y2M2 353 aa10.02□□□□□ -0.81
CNTN4-211ENST00000473058 SPDYE4A6NLX3 237 aa9.98□□□□□ -0.81
CNTN4-211ENST00000473058 REM2Q8IYK8 340 aaPredicted RBP9.94□□□□□ -0.82
CNTN4-211ENST00000473058 PABPN1Q86U42 306 aaKnown RBP eCLIP9.88□□□□□ -0.83
CNTN4-211ENST00000473058 FKBP8Q14318 412 aa9.85□□□□□ -0.83
CNTN4-211ENST00000473058 PROM2Q8N271 834 aa9.84□□□□□ -0.83
CNTN4-211ENST00000473058 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
CNTN4-211ENST00000473058 PITPNM1O00562 1244 aa9.82□□□□□ -0.84
CNTN4-211ENST00000473058 CHRDL2Q6WN34 429 aa9.81□□□□□ -0.84
CNTN4-211ENST00000473058 STAG3Q9UJ98 1225 aa9.75□□□□□ -0.85
CNTN4-211ENST00000473058 CLEC11AQ9Y240 323 aa9.75□□□□□ -0.85
CNTN4-211ENST00000473058 FXR2P51116 673 aaKnown RBP eCLIP9.69□□□□□ -0.86
CNTN4-211ENST00000473058 PRR29P0C7W0 189 aa9.68□□□□□ -0.86
CNTN4-211ENST00000473058 PIP4P2Q8N4L2 257 aa9.65□□□□□ -0.86
CNTN4-211ENST00000473058 POTEHQ6S545 545 aa9.62□□□□□ -0.87
CNTN4-211ENST00000473058 FBXO3Q9UK99 471 aa9.59□□□□□ -0.87
CNTN4-211ENST00000473058 PRKAR2AP13861 404 aaKnown RBP9.57□□□□□ -0.88
CNTN4-211ENST00000473058 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
CNTN4-211ENST00000473058 AMER1Q5JTC6 1135 aaPredicted RBP9.55□□□□□ -0.88
CNTN4-211ENST00000473058 CREBZFQ9NS37 354 aa9.53□□□□□ -0.88
CNTN4-211ENST00000473058 CHADLQ6NUI6 762 aa9.51□□□□□ -0.89
CNTN4-211ENST00000473058 MIER1Q8N108 512 aa9.47□□□□□ -0.89
CNTN4-211ENST00000473058 FARP1Q9Y4F1 1045 aaPredicted RBP9.46□□□□□ -0.9
CNTN4-211ENST00000473058 PLEKHG5O94827 1062 aa9.45□□□□□ -0.9
CNTN4-211ENST00000473058 MNX1P50219 401 aaPredicted RBP9.43□□□□□ -0.9
CNTN4-211ENST00000473058 VASPP50552 380 aaPredicted RBP9.43□□□□□ -0.9
CNTN4-211ENST00000473058 PLCD3Q8N3E9 789 aa9.43□□□□□ -0.9
CNTN4-211ENST00000473058 SLC24A1O60721 1099 aa9.39□□□□□ -0.91
CNTN4-211ENST00000473058 NPM1P06748 294 aaKnown RBP eCLIP9.39□□□□□ -0.91
CNTN4-211ENST00000473058 ZBTB47Q9UFB7 747 aaPredicted RBP9.39□□□□□ -0.91
CNTN4-211ENST00000473058 C19orf67A6NJJ6 358 aa9.36□□□□□ -0.91
CNTN4-211ENST00000473058 HAX1O00165 279 aa9.36□□□□□ -0.91
CNTN4-211ENST00000473058 CD44P16070 742 aaKnown RBP9.29□□□□□ -0.92
CNTN4-211ENST00000473058 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
CNTN4-211ENST00000473058 KLHL34Q8N239 644 aa9.28□□□□□ -0.92
CNTN4-211ENST00000473058 EVX2Q03828 476 aa9.27□□□□□ -0.93
CNTN4-211ENST00000473058 NUBP1P53384 320 aa9.26□□□□□ -0.93
CNTN4-211ENST00000473058 PAK3O75914 559 aaPredicted RBP9.25□□□□□ -0.93
CNTN4-211ENST00000473058 RASEFQ8IZ41 740 aa9.22□□□□□ -0.93
CNTN4-211ENST00000473058 SP7Q8TDD2 431 aaPredicted RBP9.22□□□□□ -0.93
CNTN4-211ENST00000473058 SPOCK2Q92563 424 aa9.22□□□□□ -0.93
CNTN4-211ENST00000473058 ZRANB1Q9UGI0 708 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms