RNA–Protein interactions for RNA: ENST00000471710.2

TDRD3-206, Transcript of tudor domain containing 3, humanhuman

TSL 2

Gene TDRD3, Length 3,234 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-206ENST00000471710 AEBP2Q6ZN18 517 aaPredicted RBP13.35□□□□□ -0.27
TDRD3-206ENST00000471710 CHIC1Q5VXU3 224 aa12.53□□□□□ -0.4
TDRD3-206ENST00000471710 SENP3Q9H4L4 574 aaPredicted RBP11.52□□□□□ -0.57
TDRD3-206ENST00000471710 PHF23Q9BUL5 403 aaPredicted RBP11.31□□□□□ -0.6
TDRD3-206ENST00000471710 POTEDQ86YR6 584 aa11.05□□□□□ -0.64
TDRD3-206ENST00000471710 FOXD1Q16676 465 aa10.8□□□□□ -0.68
TDRD3-206ENST00000471710 MSH5O43196 834 aa10.32□□□□□ -0.76
TDRD3-206ENST00000471710 PIAS4Q8N2W9 510 aaPredicted RBP10.04□□□□□ -0.8
TDRD3-206ENST00000471710 PPP6R1Q9UPN7 881 aa9.67□□□□□ -0.86
TDRD3-206ENST00000471710 ADRA2BP18089 450 aa9.65□□□□□ -0.86
TDRD3-206ENST00000471710 PLPPR3Q6T4P5 718 aa9.48□□□□□ -0.89
TDRD3-206ENST00000471710 CACNB1Q02641 598 aaPredicted RBP9.32□□□□□ -0.92
TDRD3-206ENST00000471710 MAPK8IP2Q13387 824 aaPredicted RBP9.04□□□□□ -0.96
TDRD3-206ENST00000471710 DMRT2Q9Y5R5 561 aa8.99□□□□□ -0.97
TDRD3-206ENST00000471710 DCAF8L1A6NGE4 600 aa8.92□□□□□ -0.98
TDRD3-206ENST00000471710 SCAF1Q9H7N4 1312 aaKnown RBP8.83□□□□□ -1
TDRD3-206ENST00000471710 RNF39Q9H2S5 420 aa8.72□□□□□ -1.01
TDRD3-206ENST00000471710 POTEHQ6S545 545 aa8.59□□□□□ -1.03
TDRD3-206ENST00000471710 C1QBPQ07021 282 aaKnown RBP8.58□□□□□ -1.04
TDRD3-206ENST00000471710 HOXD11P31277 338 aaPredicted RBP8.41□□□□□ -1.06
TDRD3-206ENST00000471710 PPP4R3CPQ6ZMV5 832 aa8.24□□□□□ -1.09
TDRD3-206ENST00000471710 RNF216Q9NWF9 866 aaPredicted RBP8.23□□□□□ -1.09
TDRD3-206ENST00000471710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.2□□□□□ -1.1
TDRD3-206ENST00000471710 CNKSR2Q8WXI2 1034 aa8.19□□□□□ -1.1
TDRD3-206ENST00000471710 DNAJC5BQ9UF47 199 aa8.12□□□□□ -1.11
TDRD3-206ENST00000471710 CAPN15O75808 1086 aa8.06□□□□□ -1.12
TDRD3-206ENST00000471710 DSG3P32926 999 aa8.01□□□□□ -1.13
TDRD3-206ENST00000471710 SPINK5Q9NQ38 1064 aaPredicted RBP7.97□□□□□ -1.13
TDRD3-206ENST00000471710 U3KPZ7 1027 aaPredicted RBP7.85□□□□□ -1.15
TDRD3-206ENST00000471710 ABCB7O75027 752 aa7.82□□□□□ -1.16
TDRD3-206ENST00000471710 TRHP20396 242 aaPredicted RBP7.81□□□□□ -1.16
TDRD3-206ENST00000471710 NCBP3Q53F19 620 aaKnown RBP7.77□□□□□ -1.17
TDRD3-206ENST00000471710 CHRDL2Q6WN34 429 aa7.77□□□□□ -1.17
TDRD3-206ENST00000471710 SP7Q8TDD2 431 aaPredicted RBP7.76□□□□□ -1.17
TDRD3-206ENST00000471710 RBM42Q9BTD8 480 aaKnown RBP7.7□□□□□ -1.18
TDRD3-206ENST00000471710 ZNF219Q9P2Y4 722 aaPredicted RBP7.66□□□□□ -1.18
TDRD3-206ENST00000471710 NPM3O75607 178 aaKnown RBP7.63□□□□□ -1.19
TDRD3-206ENST00000471710 APLP2Q06481 763 aa7.6□□□□□ -1.19
TDRD3-206ENST00000471710 HAX1O00165 279 aa7.57□□□□□ -1.2
TDRD3-206ENST00000471710 PLSCR2Q9NRY7 297 aa7.48□□□□□ -1.21
TDRD3-206ENST00000471710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.46□□□□□ -1.22
TDRD3-206ENST00000471710 HNRNPUL2Q1KMD3 747 aaKnown RBP7.46□□□□□ -1.22
TDRD3-206ENST00000471710 PIP4P2Q8N4L2 257 aa7.43□□□□□ -1.22
TDRD3-206ENST00000471710 POLA2Q14181 598 aa7.4□□□□□ -1.22
TDRD3-206ENST00000471710 SLC4A2P04920 1241 aa7.4□□□□□ -1.23
TDRD3-206ENST00000471710 SAMD1Q6SPF0 538 aaPredicted RBP7.39□□□□□ -1.23
TDRD3-206ENST00000471710 AKT1S1Q96B36 256 aa7.36□□□□□ -1.23
TDRD3-206ENST00000471710 EVX2Q03828 476 aa7.32□□□□□ -1.24
TDRD3-206ENST00000471710 REM2Q8IYK8 340 aaPredicted RBP7.32□□□□□ -1.24
TDRD3-206ENST00000471710 LHX8Q68G74 356 aa7.3□□□□□ -1.24
TDRD3-206ENST00000471710 PITPNM1O00562 1244 aa7.25□□□□□ -1.25
TDRD3-206ENST00000471710 FXR2P51116 673 aaKnown RBP eCLIP7.23□□□□□ -1.25
TDRD3-206ENST00000471710 OSCARQ8IYS5 282 aa7.2□□□□□ -1.26
TDRD3-206ENST00000471710 ZBTB12Q9Y330 459 aaPredicted RBP7.14□□□□□ -1.27
TDRD3-206ENST00000471710 GABBR2O75899 941 aa7.13□□□□□ -1.27
TDRD3-206ENST00000471710 PRKAR2AP13861 404 aaKnown RBP7.11□□□□□ -1.27
TDRD3-206ENST00000471710 CLEC11AQ9Y240 323 aa7.08□□□□□ -1.28
TDRD3-206ENST00000471710 MYCNP04198 464 aaPredicted RBP7.07□□□□□ -1.28
TDRD3-206ENST00000471710 C19orf67A6NJJ6 358 aa7.03□□□□□ -1.28
TDRD3-206ENST00000471710 KCNA4P22459 653 aa7.02□□□□□ -1.29
TDRD3-206ENST00000471710 ATF5Q9Y2D1 282 aaPredicted RBP6.95□□□□□ -1.3
TDRD3-206ENST00000471710 POTEMA6NI47 508 aa6.94□□□□□ -1.3
TDRD3-206ENST00000471710 CHADLQ6NUI6 762 aa6.94□□□□□ -1.3
TDRD3-206ENST00000471710 SPDYE1Q8NFV5 336 aaPredicted RBP6.93□□□□□ -1.3
TDRD3-206ENST00000471710 POTEIP0CG38 1075 aa6.93□□□□□ -1.3
TDRD3-206ENST00000471710 DCBLD2Q96PD2 775 aa6.92□□□□□ -1.3
TDRD3-206ENST00000471710 POTEGQ6S5H5 508 aa6.9□□□□□ -1.31
TDRD3-206ENST00000471710 SPDYE2BA6NHP3 402 aa6.88□□□□□ -1.31
TDRD3-206ENST00000471710 SPDYE6P0CI01 402 aa6.88□□□□□ -1.31
TDRD3-206ENST00000471710 SPDYE2Q495Y8 402 aa6.88□□□□□ -1.31
TDRD3-206ENST00000471710 CD44P16070 742 aaKnown RBP6.85□□□□□ -1.31
TDRD3-206ENST00000471710 PRR29P0C7W0 189 aa6.8□□□□□ -1.32
TDRD3-206ENST00000471710 OTUD5Q96G74 571 aa6.8□□□□□ -1.32
TDRD3-206ENST00000471710 FBLN2P98095 1184 aa6.79□□□□□ -1.32
TDRD3-206ENST00000471710 ZNF692Q9BU19 519 aaPredicted RBP6.78□□□□□ -1.32
TDRD3-206ENST00000471710 PCDH10Q9P2E7 1040 aa6.73□□□□□ -1.33
TDRD3-206ENST00000471710 CLCN6P51797 869 aa6.72□□□□□ -1.33
TDRD3-206ENST00000471710 POTEB2H3BUK9 544 aa6.72□□□□□ -1.33
TDRD3-206ENST00000471710 FOXD4L1Q9NU39 408 aa6.71□□□□□ -1.34
TDRD3-206ENST00000471710 FARP1Q9Y4F1 1045 aaPredicted RBP6.71□□□□□ -1.34
TDRD3-206ENST00000471710 ZRANB1Q9UGI0 708 aa6.68□□□□□ -1.34
TDRD3-206ENST00000471710 FAM163AQ96GL9 167 aaPredicted RBP6.68□□□□□ -1.34
TDRD3-206ENST00000471710 GALR2O43603 387 aaPredicted RBP6.67□□□□□ -1.34
TDRD3-206ENST00000471710 PABPN1Q86U42 306 aaKnown RBP eCLIP6.66□□□□□ -1.34
TDRD3-206ENST00000471710 SSUH2Q9Y2M2 353 aa6.66□□□□□ -1.34
TDRD3-206ENST00000471710 ZNF579Q8NAF0 562 aaKnown RBP6.62□□□□□ -1.35
TDRD3-206ENST00000471710 MKRN4PQ13434 485 aaPredicted RBP6.57□□□□□ -1.36
TDRD3-206ENST00000471710 METRNQ9UJH8 293 aa6.55□□□□□ -1.36
TDRD3-206ENST00000471710 PAK3O75914 559 aaPredicted RBP6.54□□□□□ -1.36
TDRD3-206ENST00000471710 MAMSTRQ6ZN01 415 aa6.54□□□□□ -1.36
TDRD3-206ENST00000471710 PELP1Q8IZL8 1130 aaKnown RBP6.54□□□□□ -1.36
TDRD3-206ENST00000471710 SLC4A1APQ9BWU0 796 aaKnown RBP6.54□□□□□ -1.36
TDRD3-206ENST00000471710 LCE2DQ5TA82 110 aaPredicted RBP6.54□□□□□ -1.36
TDRD3-206ENST00000471710 CDAN1Q8IWY9 1227 aa6.54□□□□□ -1.36
TDRD3-206ENST00000471710 SCUBE2Q9NQ36 999 aa6.53□□□□□ -1.36
TDRD3-206ENST00000471710 PHF12Q96QT6 1004 aa6.53□□□□□ -1.36
TDRD3-206ENST00000471710 POTEJP0CG39 1038 aa6.49□□□□□ -1.37
TDRD3-206ENST00000471710 SLC39A7Q92504 469 aa6.47□□□□□ -1.37
TDRD3-206ENST00000471710 C7P10643 843 aa6.47□□□□□ -1.37
TDRD3-206ENST00000471710 ATXN8OSP0DMR3 200 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms