RNA–Protein interactions for RNA: ENST00000471404.1

GMCL1-203, Transcript of germ cell-less, spermatogenesis associated 1, humanhuman

TSL 5

Gene GMCL1, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMCL1-203ENST00000471404 AEBP2Q6ZN18 517 aaPredicted RBP30.68■■■□□ 2.5
GMCL1-203ENST00000471404 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
GMCL1-203ENST00000471404 PHF23Q9BUL5 403 aaPredicted RBP26.14■■□□□ 1.78
GMCL1-203ENST00000471404 SENP3Q9H4L4 574 aaPredicted RBP26.07■■□□□ 1.76
GMCL1-203ENST00000471404 FOXD1Q16676 465 aa24.22■■□□□ 1.47
GMCL1-203ENST00000471404 PLPPR3Q6T4P5 718 aa24.05■■□□□ 1.44
GMCL1-203ENST00000471404 PPP6R1Q9UPN7 881 aa23.13■■□□□ 1.29
GMCL1-203ENST00000471404 ADRA2BP18089 450 aa23.11■■□□□ 1.29
GMCL1-203ENST00000471404 PIAS4Q8N2W9 510 aaPredicted RBP22.79■■□□□ 1.24
GMCL1-203ENST00000471404 MSH5O43196 834 aa22.42■■□□□ 1.18
GMCL1-203ENST00000471404 PPP4R3CPQ6ZMV5 832 aa21.18■□□□□ 0.98
GMCL1-203ENST00000471404 SCAF1Q9H7N4 1312 aaKnown RBP21.14■□□□□ 0.97
GMCL1-203ENST00000471404 MAPK8IP2Q13387 824 aaPredicted RBP21.03■□□□□ 0.96
GMCL1-203ENST00000471404 POTEDQ86YR6 584 aa20.81■□□□□ 0.92
GMCL1-203ENST00000471404 DMRT2Q9Y5R5 561 aa20.78■□□□□ 0.92
GMCL1-203ENST00000471404 CNKSR2Q8WXI2 1034 aa20.63■□□□□ 0.89
GMCL1-203ENST00000471404 NCBP3Q53F19 620 aaKnown RBP20.56■□□□□ 0.88
GMCL1-203ENST00000471404 KCNA4P22459 653 aa20.44■□□□□ 0.86
GMCL1-203ENST00000471404 RNF216Q9NWF9 866 aaPredicted RBP20.28■□□□□ 0.84
GMCL1-203ENST00000471404 NPM3O75607 178 aaKnown RBP20.25■□□□□ 0.83
GMCL1-203ENST00000471404 HOXD11P31277 338 aaPredicted RBP20.25■□□□□ 0.83
GMCL1-203ENST00000471404 DCAF8L1A6NGE4 600 aa19.9■□□□□ 0.78
GMCL1-203ENST00000471404 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
GMCL1-203ENST00000471404 SLC4A1APQ9BWU0 796 aaKnown RBP19.42■□□□□ 0.7
GMCL1-203ENST00000471404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.32■□□□□ 0.68
GMCL1-203ENST00000471404 RNF39Q9H2S5 420 aa19.19■□□□□ 0.66
GMCL1-203ENST00000471404 SLC4A2P04920 1241 aa19.18■□□□□ 0.66
GMCL1-203ENST00000471404 U3KPZ7 1027 aaPredicted RBP18.97■□□□□ 0.63
GMCL1-203ENST00000471404 C1QBPQ07021 282 aaKnown RBP18.94■□□□□ 0.62
GMCL1-203ENST00000471404 FOXD4L1Q9NU39 408 aa18.87■□□□□ 0.61
GMCL1-203ENST00000471404 CACNB1Q02641 598 aaPredicted RBP18.86■□□□□ 0.61
GMCL1-203ENST00000471404 ZBTB22O15209 634 aa18.8■□□□□ 0.6
GMCL1-203ENST00000471404 MYCNP04198 464 aaPredicted RBP18.73■□□□□ 0.59
GMCL1-203ENST00000471404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
GMCL1-203ENST00000471404 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
GMCL1-203ENST00000471404 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
GMCL1-203ENST00000471404 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
GMCL1-203ENST00000471404 APLP2Q06481 763 aa18.52■□□□□ 0.56
GMCL1-203ENST00000471404 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
GMCL1-203ENST00000471404 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
GMCL1-203ENST00000471404 CAPN15O75808 1086 aa18.45■□□□□ 0.54
GMCL1-203ENST00000471404 TRHP20396 242 aaPredicted RBP18.31■□□□□ 0.52
GMCL1-203ENST00000471404 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
GMCL1-203ENST00000471404 ATF5Q9Y2D1 282 aaPredicted RBP18.24■□□□□ 0.51
GMCL1-203ENST00000471404 ATXN8OSP0DMR3 200 aa18.23■□□□□ 0.51
GMCL1-203ENST00000471404 DSG3P32926 999 aa18.18■□□□□ 0.5
GMCL1-203ENST00000471404 ABCB7O75027 752 aa18.09■□□□□ 0.49
GMCL1-203ENST00000471404 POLA2Q14181 598 aa17.96■□□□□ 0.47
GMCL1-203ENST00000471404 ZBTB12Q9Y330 459 aaPredicted RBP17.65■□□□□ 0.42
GMCL1-203ENST00000471404 FBLN2P98095 1184 aa17.5■□□□□ 0.39
GMCL1-203ENST00000471404 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
GMCL1-203ENST00000471404 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
GMCL1-203ENST00000471404 RBM42Q9BTD8 480 aaKnown RBP17.33■□□□□ 0.36
GMCL1-203ENST00000471404 SPDYE2BA6NHP3 402 aa17.16■□□□□ 0.34
GMCL1-203ENST00000471404 SPDYE6P0CI01 402 aa17.16■□□□□ 0.34
GMCL1-203ENST00000471404 SPDYE2Q495Y8 402 aa17.16■□□□□ 0.34
GMCL1-203ENST00000471404 AKT1S1Q96B36 256 aa17.08■□□□□ 0.32
GMCL1-203ENST00000471404 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
GMCL1-203ENST00000471404 SSUH2Q9Y2M2 353 aa16.99■□□□□ 0.31
GMCL1-203ENST00000471404 SPDYE4A6NLX3 237 aa16.94■□□□□ 0.3
GMCL1-203ENST00000471404 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
GMCL1-203ENST00000471404 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
GMCL1-203ENST00000471404 FKBP8Q14318 412 aa16.75■□□□□ 0.27
GMCL1-203ENST00000471404 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
GMCL1-203ENST00000471404 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
GMCL1-203ENST00000471404 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
GMCL1-203ENST00000471404 CLEC11AQ9Y240 323 aa16.64■□□□□ 0.25
GMCL1-203ENST00000471404 PROM2Q8N271 834 aa16.62■□□□□ 0.25
GMCL1-203ENST00000471404 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
GMCL1-203ENST00000471404 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
GMCL1-203ENST00000471404 FXR2P51116 673 aaKnown RBP eCLIP16.46■□□□□ 0.23
GMCL1-203ENST00000471404 PIP4P2Q8N4L2 257 aa16.45■□□□□ 0.22
GMCL1-203ENST00000471404 POTEHQ6S545 545 aa16.43■□□□□ 0.22
GMCL1-203ENST00000471404 PRKAR2AP13861 404 aaKnown RBP16.3■□□□□ 0.2
GMCL1-203ENST00000471404 CHADLQ6NUI6 762 aa16.26■□□□□ 0.19
GMCL1-203ENST00000471404 FBXO3Q9UK99 471 aa16.21■□□□□ 0.19
GMCL1-203ENST00000471404 CREBZFQ9NS37 354 aa16.2■□□□□ 0.18
GMCL1-203ENST00000471404 MIER1Q8N108 512 aa16.09■□□□□ 0.17
GMCL1-203ENST00000471404 FARP1Q9Y4F1 1045 aaPredicted RBP16.08■□□□□ 0.16
GMCL1-203ENST00000471404 PLCD3Q8N3E9 789 aa16.05■□□□□ 0.16
GMCL1-203ENST00000471404 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
GMCL1-203ENST00000471404 VASPP50552 380 aaPredicted RBP16■□□□□ 0.15
GMCL1-203ENST00000471404 MNX1P50219 401 aaPredicted RBP15.99■□□□□ 0.15
GMCL1-203ENST00000471404 HAX1O00165 279 aa15.98■□□□□ 0.15
GMCL1-203ENST00000471404 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
GMCL1-203ENST00000471404 C19orf67A6NJJ6 358 aa15.91■□□□□ 0.14
GMCL1-203ENST00000471404 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
GMCL1-203ENST00000471404 CD44P16070 742 aaKnown RBP15.83■□□□□ 0.12
GMCL1-203ENST00000471404 EVX2Q03828 476 aa15.82■□□□□ 0.12
GMCL1-203ENST00000471404 KLHL34Q8N239 644 aa15.79■□□□□ 0.12
GMCL1-203ENST00000471404 IFNLR1Q8IU57 520 aaPredicted RBP15.75■□□□□ 0.11
GMCL1-203ENST00000471404 PAK3O75914 559 aaPredicted RBP15.72■□□□□ 0.11
GMCL1-203ENST00000471404 ZRANB1Q9UGI0 708 aa15.71■□□□□ 0.11
GMCL1-203ENST00000471404 NUBP1P53384 320 aa15.7■□□□□ 0.1
GMCL1-203ENST00000471404 SP7Q8TDD2 431 aaPredicted RBP15.7■□□□□ 0.1
GMCL1-203ENST00000471404 RASEFQ8IZ41 740 aa15.69■□□□□ 0.1
GMCL1-203ENST00000471404 TSPYL2Q9H2G4 693 aaPredicted RBP15.66■□□□□ 0.1
GMCL1-203ENST00000471404 SPOCK2Q92563 424 aa15.62■□□□□ 0.09
GMCL1-203ENST00000471404 ZNF579Q8NAF0 562 aaKnown RBP15.61■□□□□ 0.09
GMCL1-203ENST00000471404 FAM212AQ96EL1 285 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms