RNA–Protein interactions for RNA: ENST00000470618.1

NECTIN3-203, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-203ENST00000470618 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
NECTIN3-203ENST00000470618 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
NECTIN3-203ENST00000470618 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
NECTIN3-203ENST00000470618 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
NECTIN3-203ENST00000470618 FOXD1Q16676 465 aa17.58■□□□□ 0.4
NECTIN3-203ENST00000470618 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
NECTIN3-203ENST00000470618 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
NECTIN3-203ENST00000470618 ADRA2BP18089 450 aa16.82■□□□□ 0.28
NECTIN3-203ENST00000470618 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
NECTIN3-203ENST00000470618 MSH5O43196 834 aa16.24■□□□□ 0.19
NECTIN3-203ENST00000470618 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
NECTIN3-203ENST00000470618 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
NECTIN3-203ENST00000470618 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
NECTIN3-203ENST00000470618 DMRT2Q9Y5R5 561 aa15.08■□□□□ 0
NECTIN3-203ENST00000470618 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
NECTIN3-203ENST00000470618 POTEDQ86YR6 584 aa15□□□□□ -0.01
NECTIN3-203ENST00000470618 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
NECTIN3-203ENST00000470618 KCNA4P22459 653 aa14.96□□□□□ -0.01
NECTIN3-203ENST00000470618 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
NECTIN3-203ENST00000470618 RNF216Q9NWF9 866 aaPredicted RBP14.76□□□□□ -0.05
NECTIN3-203ENST00000470618 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
NECTIN3-203ENST00000470618 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
NECTIN3-203ENST00000470618 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
NECTIN3-203ENST00000470618 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.13
NECTIN3-203ENST00000470618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.03□□□□□ -0.16
NECTIN3-203ENST00000470618 SLC4A2P04920 1241 aa14□□□□□ -0.17
NECTIN3-203ENST00000470618 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
NECTIN3-203ENST00000470618 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
NECTIN3-203ENST00000470618 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
NECTIN3-203ENST00000470618 ZBTB22O15209 634 aa13.78□□□□□ -0.2
NECTIN3-203ENST00000470618 C1QBPQ07021 282 aaKnown RBP13.73□□□□□ -0.21
NECTIN3-203ENST00000470618 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
NECTIN3-203ENST00000470618 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
NECTIN3-203ENST00000470618 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
NECTIN3-203ENST00000470618 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
NECTIN3-203ENST00000470618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
NECTIN3-203ENST00000470618 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
NECTIN3-203ENST00000470618 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
NECTIN3-203ENST00000470618 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
NECTIN3-203ENST00000470618 APLP2Q06481 763 aa13.44□□□□□ -0.26
NECTIN3-203ENST00000470618 CAPN15O75808 1086 aa13.4□□□□□ -0.26
NECTIN3-203ENST00000470618 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
NECTIN3-203ENST00000470618 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
NECTIN3-203ENST00000470618 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
NECTIN3-203ENST00000470618 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
NECTIN3-203ENST00000470618 DSG3P32926 999 aa13.2□□□□□ -0.3
NECTIN3-203ENST00000470618 ABCB7O75027 752 aa13.15□□□□□ -0.3
NECTIN3-203ENST00000470618 POLA2Q14181 598 aa13.07□□□□□ -0.32
NECTIN3-203ENST00000470618 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
NECTIN3-203ENST00000470618 MKRN4PQ13434 485 aaPredicted RBP12.74□□□□□ -0.37
NECTIN3-203ENST00000470618 FBLN2P98095 1184 aa12.73□□□□□ -0.37
NECTIN3-203ENST00000470618 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
NECTIN3-203ENST00000470618 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
NECTIN3-203ENST00000470618 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
NECTIN3-203ENST00000470618 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
NECTIN3-203ENST00000470618 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
NECTIN3-203ENST00000470618 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
NECTIN3-203ENST00000470618 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
NECTIN3-203ENST00000470618 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
NECTIN3-203ENST00000470618 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
NECTIN3-203ENST00000470618 FKBP8Q14318 412 aa12.29□□□□□ -0.44
NECTIN3-203ENST00000470618 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
NECTIN3-203ENST00000470618 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
NECTIN3-203ENST00000470618 PROM2Q8N271 834 aa12.16□□□□□ -0.46
NECTIN3-203ENST00000470618 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
NECTIN3-203ENST00000470618 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
NECTIN3-203ENST00000470618 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
NECTIN3-203ENST00000470618 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
NECTIN3-203ENST00000470618 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
NECTIN3-203ENST00000470618 PRR29P0C7W0 189 aa11.97□□□□□ -0.49
NECTIN3-203ENST00000470618 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.5
NECTIN3-203ENST00000470618 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
NECTIN3-203ENST00000470618 POTEHQ6S545 545 aa11.86□□□□□ -0.51
NECTIN3-203ENST00000470618 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
NECTIN3-203ENST00000470618 PRKAR2AP13861 404 aaKnown RBP11.84□□□□□ -0.51
NECTIN3-203ENST00000470618 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
NECTIN3-203ENST00000470618 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
NECTIN3-203ENST00000470618 MIER1Q8N108 512 aa11.75□□□□□ -0.53
NECTIN3-203ENST00000470618 VASPP50552 380 aaPredicted RBP11.72□□□□□ -0.53
NECTIN3-203ENST00000470618 PLCD3Q8N3E9 789 aa11.72□□□□□ -0.53
NECTIN3-203ENST00000470618 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
NECTIN3-203ENST00000470618 PLEKHG5O94827 1062 aa11.67□□□□□ -0.54
NECTIN3-203ENST00000470618 MNX1P50219 401 aaPredicted RBP11.67□□□□□ -0.54
NECTIN3-203ENST00000470618 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
NECTIN3-203ENST00000470618 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
NECTIN3-203ENST00000470618 HAX1O00165 279 aa11.57□□□□□ -0.56
NECTIN3-203ENST00000470618 IFNLR1Q8IU57 520 aaPredicted RBP11.57□□□□□ -0.56
NECTIN3-203ENST00000470618 KLHL34Q8N239 644 aa11.55□□□□□ -0.56
NECTIN3-203ENST00000470618 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
NECTIN3-203ENST00000470618 CD44P16070 742 aaKnown RBP11.5□□□□□ -0.57
NECTIN3-203ENST00000470618 EVX2Q03828 476 aa11.49□□□□□ -0.57
NECTIN3-203ENST00000470618 NUBP1P53384 320 aa11.47□□□□□ -0.57
NECTIN3-203ENST00000470618 RASEFQ8IZ41 740 aa11.45□□□□□ -0.58
NECTIN3-203ENST00000470618 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
NECTIN3-203ENST00000470618 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
NECTIN3-203ENST00000470618 PAK3O75914 559 aaPredicted RBP11.41□□□□□ -0.58
NECTIN3-203ENST00000470618 TSPYL2Q9H2G4 693 aaPredicted RBP11.41□□□□□ -0.58
NECTIN3-203ENST00000470618 FAM212AQ96EL1 285 aa11.36□□□□□ -0.59
NECTIN3-203ENST00000470618 SP7Q8TDD2 431 aaPredicted RBP11.35□□□□□ -0.59
NECTIN3-203ENST00000470618 DCAF8Q5TAQ9 597 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms