RNA–Protein interactions for RNA: ENST00000470308.1

ZC3H13-205, Transcript of zinc finger CCCH-type containing 13, humanhuman

TSL 5

Gene ZC3H13, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H13-205ENST00000470308 AEBP2Q6ZN18 517 aaPredicted RBP33.15■■■□□ 2.9
ZC3H13-205ENST00000470308 CHIC1Q5VXU3 224 aa32.29■■■□□ 2.76
ZC3H13-205ENST00000470308 PHF23Q9BUL5 403 aaPredicted RBP28.44■■■□□ 2.14
ZC3H13-205ENST00000470308 SENP3Q9H4L4 574 aaPredicted RBP28.08■■■□□ 2.09
ZC3H13-205ENST00000470308 PLPPR3Q6T4P5 718 aa26.19■■□□□ 1.78
ZC3H13-205ENST00000470308 FOXD1Q16676 465 aa26.11■■□□□ 1.77
ZC3H13-205ENST00000470308 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
ZC3H13-205ENST00000470308 ADRA2BP18089 450 aa25.1■■□□□ 1.61
ZC3H13-205ENST00000470308 PIAS4Q8N2W9 510 aaPredicted RBP24.6■■□□□ 1.53
ZC3H13-205ENST00000470308 MSH5O43196 834 aa24.04■■□□□ 1.44
ZC3H13-205ENST00000470308 PPP4R3CPQ6ZMV5 832 aa23.1■■□□□ 1.29
ZC3H13-205ENST00000470308 SCAF1Q9H7N4 1312 aaKnown RBP22.88■■□□□ 1.25
ZC3H13-205ENST00000470308 MAPK8IP2Q13387 824 aaPredicted RBP22.79■■□□□ 1.24
ZC3H13-205ENST00000470308 KCNA4P22459 653 aa22.53■■□□□ 1.2
ZC3H13-205ENST00000470308 CNKSR2Q8WXI2 1034 aa22.44■■□□□ 1.18
ZC3H13-205ENST00000470308 NCBP3Q53F19 620 aaKnown RBP22.43■■□□□ 1.18
ZC3H13-205ENST00000470308 DMRT2Q9Y5R5 561 aa22.42■■□□□ 1.18
ZC3H13-205ENST00000470308 NPM3O75607 178 aaKnown RBP22.15■■□□□ 1.14
ZC3H13-205ENST00000470308 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
ZC3H13-205ENST00000470308 RNF216Q9NWF9 866 aaPredicted RBP22■■□□□ 1.11
ZC3H13-205ENST00000470308 HOXD11P31277 338 aaPredicted RBP21.93■■□□□ 1.1
ZC3H13-205ENST00000470308 DCAF8L1A6NGE4 600 aa21.48■■□□□ 1.03
ZC3H13-205ENST00000470308 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
ZC3H13-205ENST00000470308 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
ZC3H13-205ENST00000470308 SLC4A2P04920 1241 aa20.94■□□□□ 0.94
ZC3H13-205ENST00000470308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.92■□□□□ 0.941e-6■□□□□ 11.2
ZC3H13-205ENST00000470308 EHMT2Q96KQ7 1210 aa20.79■□□□□ 0.92
ZC3H13-205ENST00000470308 ZBTB22O15209 634 aa20.74■□□□□ 0.91
ZC3H13-205ENST00000470308 FOXD4L1Q9NU39 408 aa20.71■□□□□ 0.91
ZC3H13-205ENST00000470308 RNF39Q9H2S5 420 aa20.62■□□□□ 0.89
ZC3H13-205ENST00000470308 U3KPZ7 1027 aaPredicted RBP20.59■□□□□ 0.89
ZC3H13-205ENST00000470308 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
ZC3H13-205ENST00000470308 MYCNP04198 464 aaPredicted RBP20.44■□□□□ 0.86
ZC3H13-205ENST00000470308 C1QBPQ07021 282 aaKnown RBP20.35■□□□□ 0.85
ZC3H13-205ENST00000470308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
ZC3H13-205ENST00000470308 HNRNPUL2Q1KMD3 747 aaKnown RBP20.24■□□□□ 0.83
ZC3H13-205ENST00000470308 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
ZC3H13-205ENST00000470308 CACNB1Q02641 598 aaPredicted RBP20.12■□□□□ 0.81
ZC3H13-205ENST00000470308 SPINK5Q9NQ38 1064 aaPredicted RBP20.04■□□□□ 0.8
ZC3H13-205ENST00000470308 APLP2Q06481 763 aa20.02■□□□□ 0.8
ZC3H13-205ENST00000470308 ATF5Q9Y2D1 282 aaPredicted RBP19.97■□□□□ 0.79
ZC3H13-205ENST00000470308 ATXN8OSP0DMR3 200 aa19.96■□□□□ 0.79
ZC3H13-205ENST00000470308 CAPN15O75808 1086 aa19.94■□□□□ 0.78
ZC3H13-205ENST00000470308 TRHP20396 242 aaPredicted RBP19.85■□□□□ 0.77
ZC3H13-205ENST00000470308 ZNF219Q9P2Y4 722 aaPredicted RBP19.79■□□□□ 0.76
ZC3H13-205ENST00000470308 DSG3P32926 999 aa19.62■□□□□ 0.73
ZC3H13-205ENST00000470308 ABCB7O75027 752 aa19.59■□□□□ 0.73
ZC3H13-205ENST00000470308 POLA2Q14181 598 aa19.51■□□□□ 0.71
ZC3H13-205ENST00000470308 ZBTB12Q9Y330 459 aaPredicted RBP19.12■□□□□ 0.65
ZC3H13-205ENST00000470308 MKRN4PQ13434 485 aaPredicted RBP19.08■□□□□ 0.64
ZC3H13-205ENST00000470308 FBLN2P98095 1184 aa19.06■□□□□ 0.64
ZC3H13-205ENST00000470308 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
ZC3H13-205ENST00000470308 RBM42Q9BTD8 480 aaKnown RBP18.64■□□□□ 0.57
ZC3H13-205ENST00000470308 SPDYE2BA6NHP3 402 aa18.63■□□□□ 0.57
ZC3H13-205ENST00000470308 SPDYE6P0CI01 402 aa18.63■□□□□ 0.57
ZC3H13-205ENST00000470308 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
ZC3H13-205ENST00000470308 SPDYE4A6NLX3 237 aa18.6■□□□□ 0.57
ZC3H13-205ENST00000470308 FKBP8Q14318 412 aa18.6■□□□□ 0.57
ZC3H13-205ENST00000470308 ZNF692Q9BU19 519 aaPredicted RBP18.58■□□□□ 0.56
ZC3H13-205ENST00000470308 SSUH2Q9Y2M2 353 aa18.49■□□□□ 0.55
ZC3H13-205ENST00000470308 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
ZC3H13-205ENST00000470308 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
ZC3H13-205ENST00000470308 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
ZC3H13-205ENST00000470308 PROM2Q8N271 834 aa18.27■□□□□ 0.52
ZC3H13-205ENST00000470308 SPDYE1Q8NFV5 336 aaPredicted RBP18.1■□□□□ 0.49
ZC3H13-205ENST00000470308 PITPNM1O00562 1244 aa18.08■□□□□ 0.48
ZC3H13-205ENST00000470308 CLEC11AQ9Y240 323 aa18.05■□□□□ 0.48
ZC3H13-205ENST00000470308 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
ZC3H13-205ENST00000470308 CHRDL2Q6WN34 429 aa17.92■□□□□ 0.46
ZC3H13-205ENST00000470308 FBXO3Q9UK99 471 aa17.89■□□□□ 0.45
ZC3H13-205ENST00000470308 PRR29P0C7W0 189 aa17.87■□□□□ 0.45
ZC3H13-205ENST00000470308 FXR2P51116 673 aaKnown RBP eCLIP17.74■□□□□ 0.43
ZC3H13-205ENST00000470308 PIP4P2Q8N4L2 257 aa17.71■□□□□ 0.43
ZC3H13-205ENST00000470308 VASPP50552 380 aaPredicted RBP17.69■□□□□ 0.42
ZC3H13-205ENST00000470308 MIER1Q8N108 512 aa17.66■□□□□ 0.42
ZC3H13-205ENST00000470308 CREBZFQ9NS37 354 aa17.65■□□□□ 0.42
ZC3H13-205ENST00000470308 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
ZC3H13-205ENST00000470308 PRKAR2AP13861 404 aaKnown RBP17.62■□□□□ 0.41
ZC3H13-205ENST00000470308 PLCD3Q8N3E9 789 aa17.62■□□□□ 0.41
ZC3H13-205ENST00000470308 PLEKHG5O94827 1062 aa17.52■□□□□ 0.4
ZC3H13-205ENST00000470308 IFNLR1Q8IU57 520 aaPredicted RBP17.47■□□□□ 0.39
ZC3H13-205ENST00000470308 MNX1P50219 401 aaPredicted RBP17.46■□□□□ 0.39
ZC3H13-205ENST00000470308 FARP1Q9Y4F1 1045 aaPredicted RBP17.43■□□□□ 0.38
ZC3H13-205ENST00000470308 POTEHQ6S545 545 aa17.42■□□□□ 0.38
ZC3H13-205ENST00000470308 KLHL34Q8N239 644 aa17.41■□□□□ 0.38
ZC3H13-205ENST00000470308 ZBTB47Q9UFB7 747 aaPredicted RBP17.37■□□□□ 0.37
ZC3H13-205ENST00000470308 NPM1P06748 294 aaKnown RBP eCLIP17.31■□□□□ 0.36
ZC3H13-205ENST00000470308 SPOCK2Q92563 424 aa17.24■□□□□ 0.35
ZC3H13-205ENST00000470308 NUBP1P53384 320 aa17.21■□□□□ 0.35
ZC3H13-205ENST00000470308 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
ZC3H13-205ENST00000470308 HAX1O00165 279 aa17.15■□□□□ 0.34
ZC3H13-205ENST00000470308 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
ZC3H13-205ENST00000470308 CD44P16070 742 aaKnown RBP17.11■□□□□ 0.33
ZC3H13-205ENST00000470308 TSPYL2Q9H2G4 693 aaPredicted RBP17.08■□□□□ 0.32
ZC3H13-205ENST00000470308 EVX2Q03828 476 aa17.04■□□□□ 0.32
ZC3H13-205ENST00000470308 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
ZC3H13-205ENST00000470308 FAM212AQ96EL1 285 aa17.04■□□□□ 0.32
ZC3H13-205ENST00000470308 PAK3O75914 559 aaPredicted RBP17.02■□□□□ 0.32
ZC3H13-205ENST00000470308 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.32
ZC3H13-205ENST00000470308 CIZ1Q9ULV3 898 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms