RNA–Protein interactions for RNA: ENST00000469785.1

CROT-205, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 4

Gene CROT, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-205ENST00000469785 AEBP2Q6ZN18 517 aaPredicted RBP28.86■■■□□ 2.21
CROT-205ENST00000469785 CHIC1Q5VXU3 224 aa28.32■■■□□ 2.12
CROT-205ENST00000469785 PHF23Q9BUL5 403 aaPredicted RBP24.78■■□□□ 1.56
CROT-205ENST00000469785 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.54
CROT-205ENST00000469785 PLPPR3Q6T4P5 718 aa23.09■■□□□ 1.29
CROT-205ENST00000469785 FOXD1Q16676 465 aa22.77■■□□□ 1.24
CROT-205ENST00000469785 ADRA2BP18089 450 aa21.85■■□□□ 1.09
CROT-205ENST00000469785 PPP6R1Q9UPN7 881 aa21.83■■□□□ 1.09
CROT-205ENST00000469785 PIAS4Q8N2W9 510 aaPredicted RBP21.56■■□□□ 1.04
CROT-205ENST00000469785 MSH5O43196 834 aa21.18■□□□□ 0.98
CROT-205ENST00000469785 PPP4R3CPQ6ZMV5 832 aa20.26■□□□□ 0.83
CROT-205ENST00000469785 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
CROT-205ENST00000469785 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
CROT-205ENST00000469785 MAPK8IP2Q13387 824 aaPredicted RBP19.77■□□□□ 0.76
CROT-205ENST00000469785 CNKSR2Q8WXI2 1034 aa19.76■□□□□ 0.75
CROT-205ENST00000469785 KCNA4P22459 653 aa19.75■□□□□ 0.75
CROT-205ENST00000469785 DMRT2Q9Y5R5 561 aa19.67■□□□□ 0.74
CROT-205ENST00000469785 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
CROT-205ENST00000469785 RNF216Q9NWF9 866 aaPredicted RBP19.37■□□□□ 0.69
CROT-205ENST00000469785 POTEDQ86YR6 584 aa19.3■□□□□ 0.68
CROT-205ENST00000469785 HOXD11P31277 338 aaPredicted RBP19.26■□□□□ 0.67
CROT-205ENST00000469785 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
CROT-205ENST00000469785 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
CROT-205ENST00000469785 DCAF8L1A6NGE4 600 aa18.8■□□□□ 0.6
CROT-205ENST00000469785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
CROT-205ENST00000469785 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
CROT-205ENST00000469785 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
CROT-205ENST00000469785 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
CROT-205ENST00000469785 ZBTB22O15209 634 aa18.12■□□□□ 0.49
CROT-205ENST00000469785 MYCNP04198 464 aaPredicted RBP18.07■□□□□ 0.48
CROT-205ENST00000469785 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
CROT-205ENST00000469785 RNF39Q9H2S5 420 aa18.05■□□□□ 0.48
CROT-205ENST00000469785 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
CROT-205ENST00000469785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
CROT-205ENST00000469785 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
CROT-205ENST00000469785 C1QBPQ07021 282 aaKnown RBP17.91■□□□□ 0.46
CROT-205ENST00000469785 SAMD1Q6SPF0 538 aaPredicted RBP17.88■□□□□ 0.45
CROT-205ENST00000469785 APLP2Q06481 763 aa17.87■□□□□ 0.45
CROT-205ENST00000469785 ATXN8OSP0DMR3 200 aa17.71■□□□□ 0.43
CROT-205ENST00000469785 CACNB1Q02641 598 aaPredicted RBP17.59■□□□□ 0.41
CROT-205ENST00000469785 ZNF219Q9P2Y4 722 aaPredicted RBP17.51■□□□□ 0.39
CROT-205ENST00000469785 CAPN15O75808 1086 aa17.49■□□□□ 0.39
CROT-205ENST00000469785 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
CROT-205ENST00000469785 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
CROT-205ENST00000469785 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
CROT-205ENST00000469785 DSG3P32926 999 aa17.15■□□□□ 0.34
CROT-205ENST00000469785 ABCB7O75027 752 aa17.09■□□□□ 0.33
CROT-205ENST00000469785 POLA2Q14181 598 aa17.09■□□□□ 0.33
CROT-205ENST00000469785 ZBTB12Q9Y330 459 aaPredicted RBP17.02■□□□□ 0.32
CROT-205ENST00000469785 FBLN2P98095 1184 aa16.88■□□□□ 0.29
CROT-205ENST00000469785 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
CROT-205ENST00000469785 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
CROT-205ENST00000469785 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
CROT-205ENST00000469785 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
CROT-205ENST00000469785 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
CROT-205ENST00000469785 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
CROT-205ENST00000469785 SPDYE4A6NLX3 237 aa16.4■□□□□ 0.22
CROT-205ENST00000469785 FKBP8Q14318 412 aa16.38■□□□□ 0.21
CROT-205ENST00000469785 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
CROT-205ENST00000469785 SSUH2Q9Y2M2 353 aa16.28■□□□□ 0.2
CROT-205ENST00000469785 AKT1S1Q96B36 256 aa16.24■□□□□ 0.19
CROT-205ENST00000469785 PROM2Q8N271 834 aa16.12■□□□□ 0.17
CROT-205ENST00000469785 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
CROT-205ENST00000469785 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
CROT-205ENST00000469785 SPDYE1Q8NFV5 336 aaPredicted RBP15.98■□□□□ 0.15
CROT-205ENST00000469785 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
CROT-205ENST00000469785 FBXO3Q9UK99 471 aa15.96■□□□□ 0.15
CROT-205ENST00000469785 PITPNM1O00562 1244 aa15.82■□□□□ 0.12
CROT-205ENST00000469785 CLEC11AQ9Y240 323 aa15.82■□□□□ 0.12
CROT-205ENST00000469785 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
CROT-205ENST00000469785 CHRDL2Q6WN34 429 aa15.71■□□□□ 0.11
CROT-205ENST00000469785 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
CROT-205ENST00000469785 VASPP50552 380 aaPredicted RBP15.63■□□□□ 0.09
CROT-205ENST00000469785 PLCD3Q8N3E9 789 aa15.57■□□□□ 0.08
CROT-205ENST00000469785 MIER1Q8N108 512 aa15.54■□□□□ 0.08
CROT-205ENST00000469785 FXR2P51116 673 aaKnown RBP eCLIP15.53■□□□□ 0.08
CROT-205ENST00000469785 ZBTB47Q9UFB7 747 aaPredicted RBP15.52■□□□□ 0.08
CROT-205ENST00000469785 PIP4P2Q8N4L2 257 aa15.47■□□□□ 0.07
CROT-205ENST00000469785 CREBZFQ9NS37 354 aa15.45■□□□□ 0.06
CROT-205ENST00000469785 PRKAR2AP13861 404 aaKnown RBP15.44■□□□□ 0.06
CROT-205ENST00000469785 KLHL34Q8N239 644 aa15.37■□□□□ 0.05
CROT-205ENST00000469785 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
CROT-205ENST00000469785 NPM1P06748 294 aaKnown RBP eCLIP15.35■□□□□ 0.05
CROT-205ENST00000469785 IFNLR1Q8IU57 520 aaPredicted RBP15.33■□□□□ 0.04
CROT-205ENST00000469785 FARP1Q9Y4F1 1045 aaPredicted RBP15.3■□□□□ 0.04
CROT-205ENST00000469785 MNX1P50219 401 aaPredicted RBP15.27■□□□□ 0.04
CROT-205ENST00000469785 SPOCK2Q92563 424 aa15.25■□□□□ 0.03
CROT-205ENST00000469785 POTEHQ6S545 545 aa15.19■□□□□ 0.02
CROT-205ENST00000469785 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
CROT-205ENST00000469785 FAM212AQ96EL1 285 aa15.12■□□□□ 0.01
CROT-205ENST00000469785 NUBP1P53384 320 aa15.1■□□□□ 0.01
CROT-205ENST00000469785 AMER1Q5JTC6 1135 aaPredicted RBP15.07■□□□□ 0
CROT-205ENST00000469785 GSE1Q14687 1217 aa15.06■□□□□ 0
CROT-205ENST00000469785 CD44P16070 742 aaKnown RBP15.03■□□□□ -0
CROT-205ENST00000469785 RASEFQ8IZ41 740 aa15.03■□□□□ -0
CROT-205ENST00000469785 C19orf67A6NJJ6 358 aa15□□□□□ -0.01
CROT-205ENST00000469785 HAX1O00165 279 aa14.99□□□□□ -0.01
CROT-205ENST00000469785 DCAF8Q5TAQ9 597 aa14.98□□□□□ -0.01
CROT-205ENST00000469785 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
CROT-205ENST00000469785 CIZ1Q9ULV3 898 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms