RNA–Protein interactions for RNA: ENST00000468123.1

STRADB-207, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-207ENST00000468123 AEBP2Q6ZN18 517 aaPredicted RBP24.38■■□□□ 1.49
STRADB-207ENST00000468123 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
STRADB-207ENST00000468123 PHF23Q9BUL5 403 aaPredicted RBP20.91■□□□□ 0.94
STRADB-207ENST00000468123 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
STRADB-207ENST00000468123 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
STRADB-207ENST00000468123 FOXD1Q16676 465 aa19.19■□□□□ 0.66
STRADB-207ENST00000468123 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
STRADB-207ENST00000468123 ADRA2BP18089 450 aa18.44■□□□□ 0.54
STRADB-207ENST00000468123 PIAS4Q8N2W9 510 aaPredicted RBP18.14■□□□□ 0.49
STRADB-207ENST00000468123 MSH5O43196 834 aa17.76■□□□□ 0.43
STRADB-207ENST00000468123 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
STRADB-207ENST00000468123 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
STRADB-207ENST00000468123 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.28
STRADB-207ENST00000468123 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
STRADB-207ENST00000468123 KCNA4P22459 653 aa16.61■□□□□ 0.25
STRADB-207ENST00000468123 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
STRADB-207ENST00000468123 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
STRADB-207ENST00000468123 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
STRADB-207ENST00000468123 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
STRADB-207ENST00000468123 POTEDQ86YR6 584 aa16.19■□□□□ 0.18
STRADB-207ENST00000468123 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
STRADB-207ENST00000468123 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
STRADB-207ENST00000468123 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
STRADB-207ENST00000468123 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
STRADB-207ENST00000468123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.07
STRADB-207ENST00000468123 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
STRADB-207ENST00000468123 SLC4A2P04920 1241 aa15.39■□□□□ 0.05
STRADB-207ENST00000468123 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
STRADB-207ENST00000468123 ZBTB22O15209 634 aa15.25■□□□□ 0.03
STRADB-207ENST00000468123 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
STRADB-207ENST00000468123 RNF39Q9H2S5 420 aa15.16■□□□□ 0.02
STRADB-207ENST00000468123 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
STRADB-207ENST00000468123 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
STRADB-207ENST00000468123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
STRADB-207ENST00000468123 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0
STRADB-207ENST00000468123 C1QBPQ07021 282 aaKnown RBP15.02■□□□□ -0
STRADB-207ENST00000468123 SAMD1Q6SPF0 538 aaPredicted RBP14.99□□□□□ -0.01
STRADB-207ENST00000468123 APLP2Q06481 763 aa14.96□□□□□ -0.01
STRADB-207ENST00000468123 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
STRADB-207ENST00000468123 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
STRADB-207ENST00000468123 CAPN15O75808 1086 aa14.76□□□□□ -0.05
STRADB-207ENST00000468123 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
STRADB-207ENST00000468123 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
STRADB-207ENST00000468123 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
STRADB-207ENST00000468123 TRHP20396 242 aaPredicted RBP14.67□□□□□ -0.06
STRADB-207ENST00000468123 ABCB7O75027 752 aa14.43□□□□□ -0.1
STRADB-207ENST00000468123 DSG3P32926 999 aa14.42□□□□□ -0.1
STRADB-207ENST00000468123 POLA2Q14181 598 aa14.41□□□□□ -0.1
STRADB-207ENST00000468123 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
STRADB-207ENST00000468123 FBLN2P98095 1184 aa14.18□□□□□ -0.14
STRADB-207ENST00000468123 MKRN4PQ13434 485 aaPredicted RBP14.02□□□□□ -0.17
STRADB-207ENST00000468123 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
STRADB-207ENST00000468123 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
STRADB-207ENST00000468123 SPDYE2BA6NHP3 402 aa13.8□□□□□ -0.2
STRADB-207ENST00000468123 SPDYE6P0CI01 402 aa13.8□□□□□ -0.2
STRADB-207ENST00000468123 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
STRADB-207ENST00000468123 SPDYE4A6NLX3 237 aa13.79□□□□□ -0.2
STRADB-207ENST00000468123 FKBP8Q14318 412 aa13.79□□□□□ -0.2
STRADB-207ENST00000468123 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.21
STRADB-207ENST00000468123 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
STRADB-207ENST00000468123 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
STRADB-207ENST00000468123 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
STRADB-207ENST00000468123 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
STRADB-207ENST00000468123 PROM2Q8N271 834 aa13.46□□□□□ -0.25
STRADB-207ENST00000468123 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
STRADB-207ENST00000468123 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
STRADB-207ENST00000468123 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
STRADB-207ENST00000468123 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
STRADB-207ENST00000468123 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
STRADB-207ENST00000468123 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
STRADB-207ENST00000468123 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
STRADB-207ENST00000468123 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
STRADB-207ENST00000468123 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
STRADB-207ENST00000468123 MIER1Q8N108 512 aa13.12□□□□□ -0.31
STRADB-207ENST00000468123 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
STRADB-207ENST00000468123 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.32
STRADB-207ENST00000468123 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
STRADB-207ENST00000468123 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
STRADB-207ENST00000468123 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
STRADB-207ENST00000468123 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
STRADB-207ENST00000468123 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
STRADB-207ENST00000468123 CHADLQ6NUI6 762 aa12.98□□□□□ -0.33
STRADB-207ENST00000468123 NPM1P06748 294 aaKnown RBP eCLIP12.9□□□□□ -0.34
STRADB-207ENST00000468123 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
STRADB-207ENST00000468123 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
STRADB-207ENST00000468123 MNX1P50219 401 aaPredicted RBP12.84□□□□□ -0.35
STRADB-207ENST00000468123 SPOCK2Q92563 424 aa12.82□□□□□ -0.36
STRADB-207ENST00000468123 POTEHQ6S545 545 aa12.8□□□□□ -0.36
STRADB-207ENST00000468123 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.37
STRADB-207ENST00000468123 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
STRADB-207ENST00000468123 HAX1O00165 279 aa12.68□□□□□ -0.38
STRADB-207ENST00000468123 NUBP1P53384 320 aa12.68□□□□□ -0.38
STRADB-207ENST00000468123 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
STRADB-207ENST00000468123 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
STRADB-207ENST00000468123 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
STRADB-207ENST00000468123 GSE1Q14687 1217 aa12.64□□□□□ -0.39
STRADB-207ENST00000468123 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
STRADB-207ENST00000468123 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
STRADB-207ENST00000468123 C19orf67A6NJJ6 358 aa12.6□□□□□ -0.39
STRADB-207ENST00000468123 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms