RNA–Protein interactions for RNA: ENST00000468009.6

LCA5L-215, Transcript of LCA5L, lebercilin like, humanhuman

TSL 3

Gene LCA5L, Length 616 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5L-215ENST00000468009 AEBP2Q6ZN18 517 aaPredicted RBP36.59■■■■□ 3.45
LCA5L-215ENST00000468009 CHIC1Q5VXU3 224 aa35.51■■■■□ 3.28
LCA5L-215ENST00000468009 SENP3Q9H4L4 574 aaPredicted RBP31.2■■■□□ 2.59
LCA5L-215ENST00000468009 PHF23Q9BUL5 403 aaPredicted RBP31.16■■■□□ 2.58
LCA5L-215ENST00000468009 FOXD1Q16676 465 aa28.93■■■□□ 2.22
LCA5L-215ENST00000468009 PLPPR3Q6T4P5 718 aa28.77■■■□□ 2.2
LCA5L-215ENST00000468009 ADRA2BP18089 450 aa27.59■■■□□ 2.01
LCA5L-215ENST00000468009 PPP6R1Q9UPN7 881 aa27.59■■■□□ 2.01
LCA5L-215ENST00000468009 PIAS4Q8N2W9 510 aaPredicted RBP27.27■■□□□ 1.96
LCA5L-215ENST00000468009 MSH5O43196 834 aa26.86■■□□□ 1.89
LCA5L-215ENST00000468009 SCAF1Q9H7N4 1312 aaKnown RBP25.35■■□□□ 1.65
LCA5L-215ENST00000468009 PPP4R3CPQ6ZMV5 832 aa25.29■■□□□ 1.64
LCA5L-215ENST00000468009 MAPK8IP2Q13387 824 aaPredicted RBP25.1■■□□□ 1.61
LCA5L-215ENST00000468009 POTEDQ86YR6 584 aa24.9■■□□□ 1.58
LCA5L-215ENST00000468009 DMRT2Q9Y5R5 561 aa24.82■■□□□ 1.56
LCA5L-215ENST00000468009 CNKSR2Q8WXI2 1034 aa24.66■■□□□ 1.54
LCA5L-215ENST00000468009 NCBP3Q53F19 620 aaKnown RBP24.62■■□□□ 1.53
LCA5L-215ENST00000468009 KCNA4P22459 653 aa24.36■■□□□ 1.49
LCA5L-215ENST00000468009 RNF216Q9NWF9 866 aaPredicted RBP24.23■■□□□ 1.47
LCA5L-215ENST00000468009 HOXD11P31277 338 aaPredicted RBP24.18■■□□□ 1.46
LCA5L-215ENST00000468009 NPM3O75607 178 aaKnown RBP24.17■■□□□ 1.46
LCA5L-215ENST00000468009 DCAF8L1A6NGE4 600 aa23.87■■□□□ 1.41
LCA5L-215ENST00000468009 DNAJC5BQ9UF47 199 aa23.46■■□□□ 1.35
LCA5L-215ENST00000468009 SLC4A1APQ9BWU0 796 aaKnown RBP23.2■■□□□ 1.3
LCA5L-215ENST00000468009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.29
LCA5L-215ENST00000468009 RNF39Q9H2S5 420 aa22.94■■□□□ 1.26
LCA5L-215ENST00000468009 SLC4A2P04920 1241 aa22.85■■□□□ 1.25
LCA5L-215ENST00000468009 C1QBPQ07021 282 aaKnown RBP22.69■■□□□ 1.22
LCA5L-215ENST00000468009 U3KPZ7 1027 aaPredicted RBP22.64■■□□□ 1.21
LCA5L-215ENST00000468009 CACNB1Q02641 598 aaPredicted RBP22.62■■□□□ 1.21
LCA5L-215ENST00000468009 FOXD4L1Q9NU39 408 aa22.54■■□□□ 1.2
LCA5L-215ENST00000468009 MYCNP04198 464 aaPredicted RBP22.38■■□□□ 1.17
LCA5L-215ENST00000468009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.37■■□□□ 1.17
LCA5L-215ENST00000468009 HNRNPUL2Q1KMD3 747 aaKnown RBP22.37■■□□□ 1.17
LCA5L-215ENST00000468009 ZBTB22O15209 634 aa22.36■■□□□ 1.17
LCA5L-215ENST00000468009 SAMD1Q6SPF0 538 aaPredicted RBP22.25■■□□□ 1.15
LCA5L-215ENST00000468009 APLP2Q06481 763 aa22.23■■□□□ 1.15
LCA5L-215ENST00000468009 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
LCA5L-215ENST00000468009 CAPN15O75808 1086 aa22.11■■□□□ 1.13
LCA5L-215ENST00000468009 SPINK5Q9NQ38 1064 aaPredicted RBP22.11■■□□□ 1.13
LCA5L-215ENST00000468009 CSRNP3Q8WYN3 585 aa22.03■■□□□ 1.12
LCA5L-215ENST00000468009 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
LCA5L-215ENST00000468009 ZNF219Q9P2Y4 722 aaPredicted RBP21.92■■□□□ 1.1
LCA5L-215ENST00000468009 ATXN8OSP0DMR3 200 aa21.79■■□□□ 1.08
LCA5L-215ENST00000468009 DSG3P32926 999 aa21.73■■□□□ 1.07
LCA5L-215ENST00000468009 ATF5Q9Y2D1 282 aaPredicted RBP21.73■■□□□ 1.07
LCA5L-215ENST00000468009 ABCB7O75027 752 aa21.63■■□□□ 1.05
LCA5L-215ENST00000468009 POLA2Q14181 598 aa21.49■■□□□ 1.03
LCA5L-215ENST00000468009 ZBTB12Q9Y330 459 aaPredicted RBP21.16■□□□□ 0.98
LCA5L-215ENST00000468009 FBLN2P98095 1184 aa20.96■□□□□ 0.95
LCA5L-215ENST00000468009 RBM42Q9BTD8 480 aaKnown RBP20.79■□□□□ 0.92
LCA5L-215ENST00000468009 MKRN4PQ13434 485 aaPredicted RBP20.76■□□□□ 0.91
LCA5L-215ENST00000468009 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
LCA5L-215ENST00000468009 SPDYE2BA6NHP3 402 aa20.52■□□□□ 0.88
LCA5L-215ENST00000468009 SPDYE6P0CI01 402 aa20.52■□□□□ 0.88
LCA5L-215ENST00000468009 SPDYE2Q495Y8 402 aa20.52■□□□□ 0.88
LCA5L-215ENST00000468009 AKT1S1Q96B36 256 aa20.45■□□□□ 0.86
LCA5L-215ENST00000468009 ZNF692Q9BU19 519 aaPredicted RBP20.42■□□□□ 0.86
LCA5L-215ENST00000468009 SSUH2Q9Y2M2 353 aa20.28■□□□□ 0.84
LCA5L-215ENST00000468009 SPDYE4A6NLX3 237 aa20.25■□□□□ 0.83
LCA5L-215ENST00000468009 REM2Q8IYK8 340 aaPredicted RBP20.23■□□□□ 0.83
LCA5L-215ENST00000468009 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
LCA5L-215ENST00000468009 SPDYE1Q8NFV5 336 aaPredicted RBP20.01■□□□□ 0.79
LCA5L-215ENST00000468009 FKBP8Q14318 412 aa20■□□□□ 0.79
LCA5L-215ENST00000468009 CHRDL2Q6WN34 429 aa20■□□□□ 0.79
LCA5L-215ENST00000468009 PITPNM1O00562 1244 aa19.99■□□□□ 0.79
LCA5L-215ENST00000468009 CLEC11AQ9Y240 323 aa19.95■□□□□ 0.78
LCA5L-215ENST00000468009 PROM2Q8N271 834 aa19.78■□□□□ 0.76
LCA5L-215ENST00000468009 STAG3Q9UJ98 1225 aa19.78■□□□□ 0.76
LCA5L-215ENST00000468009 PRR29P0C7W0 189 aa19.73■□□□□ 0.75
LCA5L-215ENST00000468009 POTEHQ6S545 545 aa19.69■□□□□ 0.74
LCA5L-215ENST00000468009 PIP4P2Q8N4L2 257 aa19.67■□□□□ 0.74
LCA5L-215ENST00000468009 FXR2P51116 673 aaKnown RBP eCLIP19.66■□□□□ 0.74
LCA5L-215ENST00000468009 PRKAR2AP13861 404 aaKnown RBP19.52■□□□□ 0.72
LCA5L-215ENST00000468009 CHADLQ6NUI6 762 aa19.44■□□□□ 0.7
LCA5L-215ENST00000468009 FBXO3Q9UK99 471 aa19.42■□□□□ 0.7
LCA5L-215ENST00000468009 CREBZFQ9NS37 354 aa19.33■□□□□ 0.68
LCA5L-215ENST00000468009 MIER1Q8N108 512 aa19.28■□□□□ 0.68
LCA5L-215ENST00000468009 PLEKHG5O94827 1062 aa19.27■□□□□ 0.68
LCA5L-215ENST00000468009 PLCD3Q8N3E9 789 aa19.23■□□□□ 0.67
LCA5L-215ENST00000468009 FARP1Q9Y4F1 1045 aaPredicted RBP19.23■□□□□ 0.67
LCA5L-215ENST00000468009 HAX1O00165 279 aa19.17■□□□□ 0.66
LCA5L-215ENST00000468009 NPM1P06748 294 aaKnown RBP eCLIP19.11■□□□□ 0.65
LCA5L-215ENST00000468009 VASPP50552 380 aaPredicted RBP19.1■□□□□ 0.65
LCA5L-215ENST00000468009 MNX1P50219 401 aaPredicted RBP19.06■□□□□ 0.64
LCA5L-215ENST00000468009 ZBTB47Q9UFB7 747 aaPredicted RBP19.04■□□□□ 0.64
LCA5L-215ENST00000468009 C19orf67A6NJJ6 358 aa19■□□□□ 0.63
LCA5L-215ENST00000468009 CD44P16070 742 aaKnown RBP18.95■□□□□ 0.62
LCA5L-215ENST00000468009 KLHL34Q8N239 644 aa18.92■□□□□ 0.62
LCA5L-215ENST00000468009 PAK3O75914 559 aaPredicted RBP18.88■□□□□ 0.61
LCA5L-215ENST00000468009 EVX2Q03828 476 aa18.88■□□□□ 0.61
LCA5L-215ENST00000468009 SP7Q8TDD2 431 aaPredicted RBP18.81■□□□□ 0.6
LCA5L-215ENST00000468009 ZRANB1Q9UGI0 708 aa18.81■□□□□ 0.6
LCA5L-215ENST00000468009 IFNLR1Q8IU57 520 aaPredicted RBP18.79■□□□□ 0.6
LCA5L-215ENST00000468009 TSPYL2Q9H2G4 693 aaPredicted RBP18.75■□□□□ 0.59
LCA5L-215ENST00000468009 NUBP1P53384 320 aa18.72■□□□□ 0.59
LCA5L-215ENST00000468009 RASEFQ8IZ41 740 aa18.72■□□□□ 0.59
LCA5L-215ENST00000468009 SPOCK2Q92563 424 aa18.67■□□□□ 0.58
LCA5L-215ENST00000468009 ZNF579Q8NAF0 562 aaKnown RBP18.66■□□□□ 0.58
LCA5L-215ENST00000468009 FAM212AQ96EL1 285 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms