RNA–Protein interactions for RNA: ENST00000466400.1

ABLIM1-210, Transcript of actin binding LIM protein 1, humanhuman

TSL 2

Gene ABLIM1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM1-210ENST00000466400 AEBP2Q6ZN18 517 aaPredicted RBP27.91■■■□□ 2.06
ABLIM1-210ENST00000466400 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
ABLIM1-210ENST00000466400 PHF23Q9BUL5 403 aaPredicted RBP23.8■■□□□ 1.4
ABLIM1-210ENST00000466400 SENP3Q9H4L4 574 aaPredicted RBP23.69■■□□□ 1.38
ABLIM1-210ENST00000466400 FOXD1Q16676 465 aa22.02■■□□□ 1.12
ABLIM1-210ENST00000466400 PLPPR3Q6T4P5 718 aa21.89■■□□□ 1.09
ABLIM1-210ENST00000466400 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
ABLIM1-210ENST00000466400 ADRA2BP18089 450 aa21.01■□□□□ 0.95
ABLIM1-210ENST00000466400 PIAS4Q8N2W9 510 aaPredicted RBP20.69■□□□□ 0.9
ABLIM1-210ENST00000466400 MSH5O43196 834 aa20.37■□□□□ 0.85
ABLIM1-210ENST00000466400 PPP4R3CPQ6ZMV5 832 aa19.26■□□□□ 0.67
ABLIM1-210ENST00000466400 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
ABLIM1-210ENST00000466400 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
ABLIM1-210ENST00000466400 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
ABLIM1-210ENST00000466400 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
ABLIM1-210ENST00000466400 CNKSR2Q8WXI2 1034 aa18.77■□□□□ 0.6
ABLIM1-210ENST00000466400 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
ABLIM1-210ENST00000466400 KCNA4P22459 653 aa18.61■□□□□ 0.57
ABLIM1-210ENST00000466400 HOXD11P31277 338 aaPredicted RBP18.45■□□□□ 0.54
ABLIM1-210ENST00000466400 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
ABLIM1-210ENST00000466400 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
ABLIM1-210ENST00000466400 DCAF8L1A6NGE4 600 aa18.03■□□□□ 0.48
ABLIM1-210ENST00000466400 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
ABLIM1-210ENST00000466400 SLC4A1APQ9BWU0 796 aaKnown RBP17.67■□□□□ 0.42
ABLIM1-210ENST00000466400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
ABLIM1-210ENST00000466400 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
ABLIM1-210ENST00000466400 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
ABLIM1-210ENST00000466400 U3KPZ7 1027 aaPredicted RBP17.25■□□□□ 0.35
ABLIM1-210ENST00000466400 C1QBPQ07021 282 aaKnown RBP17.23■□□□□ 0.35
ABLIM1-210ENST00000466400 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
ABLIM1-210ENST00000466400 ZBTB22O15209 634 aa17.13■□□□□ 0.33
ABLIM1-210ENST00000466400 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
ABLIM1-210ENST00000466400 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
ABLIM1-210ENST00000466400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
ABLIM1-210ENST00000466400 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
ABLIM1-210ENST00000466400 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
ABLIM1-210ENST00000466400 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
ABLIM1-210ENST00000466400 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
ABLIM1-210ENST00000466400 SPINK5Q9NQ38 1064 aaPredicted RBP16.82■□□□□ 0.28
ABLIM1-210ENST00000466400 APLP2Q06481 763 aa16.81■□□□□ 0.28
ABLIM1-210ENST00000466400 CAPN15O75808 1086 aa16.73■□□□□ 0.27
ABLIM1-210ENST00000466400 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
ABLIM1-210ENST00000466400 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
ABLIM1-210ENST00000466400 ATXN8OSP0DMR3 200 aa16.61■□□□□ 0.25
ABLIM1-210ENST00000466400 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
ABLIM1-210ENST00000466400 DSG3P32926 999 aa16.54■□□□□ 0.24
ABLIM1-210ENST00000466400 ABCB7O75027 752 aa16.41■□□□□ 0.22
ABLIM1-210ENST00000466400 POLA2Q14181 598 aa16.33■□□□□ 0.2
ABLIM1-210ENST00000466400 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
ABLIM1-210ENST00000466400 FBLN2P98095 1184 aa15.89■□□□□ 0.13
ABLIM1-210ENST00000466400 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
ABLIM1-210ENST00000466400 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
ABLIM1-210ENST00000466400 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
ABLIM1-210ENST00000466400 SPDYE2BA6NHP3 402 aa15.6■□□□□ 0.09
ABLIM1-210ENST00000466400 SPDYE6P0CI01 402 aa15.6■□□□□ 0.09
ABLIM1-210ENST00000466400 SPDYE2Q495Y8 402 aa15.6■□□□□ 0.09
ABLIM1-210ENST00000466400 AKT1S1Q96B36 256 aa15.52■□□□□ 0.08
ABLIM1-210ENST00000466400 ZNF692Q9BU19 519 aaPredicted RBP15.5■□□□□ 0.07
ABLIM1-210ENST00000466400 SSUH2Q9Y2M2 353 aa15.47■□□□□ 0.07
ABLIM1-210ENST00000466400 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
ABLIM1-210ENST00000466400 REM2Q8IYK8 340 aaPredicted RBP15.38■□□□□ 0.05
ABLIM1-210ENST00000466400 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
ABLIM1-210ENST00000466400 FKBP8Q14318 412 aa15.23■□□□□ 0.03
ABLIM1-210ENST00000466400 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
ABLIM1-210ENST00000466400 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
ABLIM1-210ENST00000466400 CHRDL2Q6WN34 429 aa15.17■□□□□ 0.02
ABLIM1-210ENST00000466400 PROM2Q8N271 834 aa15.17■□□□□ 0.02
ABLIM1-210ENST00000466400 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
ABLIM1-210ENST00000466400 STAG3Q9UJ98 1225 aa15□□□□□ -0.01
ABLIM1-210ENST00000466400 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.01
ABLIM1-210ENST00000466400 PRR29P0C7W0 189 aa14.95□□□□□ -0.02
ABLIM1-210ENST00000466400 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
ABLIM1-210ENST00000466400 POTEHQ6S545 545 aa14.92□□□□□ -0.02
ABLIM1-210ENST00000466400 PRKAR2AP13861 404 aaKnown RBP14.81□□□□□ -0.04
ABLIM1-210ENST00000466400 CHADLQ6NUI6 762 aa14.76□□□□□ -0.05
ABLIM1-210ENST00000466400 FBXO3Q9UK99 471 aa14.76□□□□□ -0.05
ABLIM1-210ENST00000466400 CREBZFQ9NS37 354 aa14.74□□□□□ -0.05
ABLIM1-210ENST00000466400 MIER1Q8N108 512 aa14.63□□□□□ -0.07
ABLIM1-210ENST00000466400 FARP1Q9Y4F1 1045 aaPredicted RBP14.62□□□□□ -0.07
ABLIM1-210ENST00000466400 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
ABLIM1-210ENST00000466400 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
ABLIM1-210ENST00000466400 VASPP50552 380 aaPredicted RBP14.56□□□□□ -0.08
ABLIM1-210ENST00000466400 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
ABLIM1-210ENST00000466400 HAX1O00165 279 aa14.5□□□□□ -0.09
ABLIM1-210ENST00000466400 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
ABLIM1-210ENST00000466400 C19orf67A6NJJ6 358 aa14.46□□□□□ -0.09
ABLIM1-210ENST00000466400 ZBTB47Q9UFB7 747 aaPredicted RBP14.43□□□□□ -0.1
ABLIM1-210ENST00000466400 EVX2Q03828 476 aa14.4□□□□□ -0.1
ABLIM1-210ENST00000466400 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
ABLIM1-210ENST00000466400 IFNLR1Q8IU57 520 aaPredicted RBP14.36□□□□□ -0.11
ABLIM1-210ENST00000466400 KLHL34Q8N239 644 aa14.33□□□□□ -0.12
ABLIM1-210ENST00000466400 NUBP1P53384 320 aa14.3□□□□□ -0.12
ABLIM1-210ENST00000466400 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
ABLIM1-210ENST00000466400 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
ABLIM1-210ENST00000466400 ZRANB1Q9UGI0 708 aa14.26□□□□□ -0.13
ABLIM1-210ENST00000466400 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
ABLIM1-210ENST00000466400 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
ABLIM1-210ENST00000466400 SPOCK2Q92563 424 aa14.21□□□□□ -0.13
ABLIM1-210ENST00000466400 ZNF579Q8NAF0 562 aaKnown RBP14.19□□□□□ -0.14
ABLIM1-210ENST00000466400 FAM212AQ96EL1 285 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms