RNA–Protein interactions for RNA: ENST00000465650.1

KCTD3-204, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 2

Gene KCTD3, Length 652 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-204ENST00000465650 AEBP2Q6ZN18 517 aaPredicted RBP27.32■■□□□ 1.96
KCTD3-204ENST00000465650 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
KCTD3-204ENST00000465650 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
KCTD3-204ENST00000465650 PHF23Q9BUL5 403 aaPredicted RBP22.89■■□□□ 1.25
KCTD3-204ENST00000465650 FOXD1Q16676 465 aa21.84■■□□□ 1.09
KCTD3-204ENST00000465650 POTEDQ86YR6 584 aa21.35■■□□□ 1.01
KCTD3-204ENST00000465650 MSH5O43196 834 aa20.56■□□□□ 0.88
KCTD3-204ENST00000465650 PIAS4Q8N2W9 510 aaPredicted RBP20.16■□□□□ 0.82
KCTD3-204ENST00000465650 PPP6R1Q9UPN7 881 aa19.97■□□□□ 0.79
KCTD3-204ENST00000465650 ADRA2BP18089 450 aa19.81■□□□□ 0.76
KCTD3-204ENST00000465650 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
KCTD3-204ENST00000465650 MAPK8IP2Q13387 824 aaPredicted RBP18.44■□□□□ 0.54
KCTD3-204ENST00000465650 DMRT2Q9Y5R5 561 aa18.36■□□□□ 0.53
KCTD3-204ENST00000465650 CACNB1Q02641 598 aaPredicted RBP18.07■□□□□ 0.48
KCTD3-204ENST00000465650 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
KCTD3-204ENST00000465650 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
KCTD3-204ENST00000465650 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
KCTD3-204ENST00000465650 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
KCTD3-204ENST00000465650 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
KCTD3-204ENST00000465650 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
KCTD3-204ENST00000465650 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
KCTD3-204ENST00000465650 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
KCTD3-204ENST00000465650 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
KCTD3-204ENST00000465650 POTEHQ6S545 545 aa16.55■□□□□ 0.24
KCTD3-204ENST00000465650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.24
KCTD3-204ENST00000465650 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
KCTD3-204ENST00000465650 DSG3P32926 999 aa16.24■□□□□ 0.19
KCTD3-204ENST00000465650 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
KCTD3-204ENST00000465650 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
KCTD3-204ENST00000465650 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
KCTD3-204ENST00000465650 CAPN15O75808 1086 aa16.09■□□□□ 0.17
KCTD3-204ENST00000465650 ABCB7O75027 752 aa15.73■□□□□ 0.11
KCTD3-204ENST00000465650 SLC4A2P04920 1241 aa15.69■□□□□ 0.1
KCTD3-204ENST00000465650 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
KCTD3-204ENST00000465650 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
KCTD3-204ENST00000465650 KCNA4P22459 653 aa15.52■□□□□ 0.08
KCTD3-204ENST00000465650 APLP2Q06481 763 aa15.44■□□□□ 0.06
KCTD3-204ENST00000465650 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
KCTD3-204ENST00000465650 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
KCTD3-204ENST00000465650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
KCTD3-204ENST00000465650 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
KCTD3-204ENST00000465650 SAMD1Q6SPF0 538 aaPredicted RBP15.25■□□□□ 0.03
KCTD3-204ENST00000465650 SP7Q8TDD2 431 aaPredicted RBP15.19■□□□□ 0.02
KCTD3-204ENST00000465650 POLA2Q14181 598 aa15.13■□□□□ 0.01
KCTD3-204ENST00000465650 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
KCTD3-204ENST00000465650 PIP4P2Q8N4L2 257 aa14.93□□□□□ -0.02
KCTD3-204ENST00000465650 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
KCTD3-204ENST00000465650 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
KCTD3-204ENST00000465650 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
KCTD3-204ENST00000465650 HAX1O00165 279 aa14.75□□□□□ -0.05
KCTD3-204ENST00000465650 PITPNM1O00562 1244 aa14.72□□□□□ -0.05
KCTD3-204ENST00000465650 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.05
KCTD3-204ENST00000465650 OSCARQ8IYS5 282 aa14.71□□□□□ -0.05
KCTD3-204ENST00000465650 EVX2Q03828 476 aa14.7□□□□□ -0.06
KCTD3-204ENST00000465650 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
KCTD3-204ENST00000465650 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
KCTD3-204ENST00000465650 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
KCTD3-204ENST00000465650 ZBTB22O15209 634 aa14.29□□□□□ -0.12
KCTD3-204ENST00000465650 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
KCTD3-204ENST00000465650 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
KCTD3-204ENST00000465650 GABBR2O75899 941 aa14.23□□□□□ -0.13
KCTD3-204ENST00000465650 LHX8Q68G74 356 aa14.22□□□□□ -0.13
KCTD3-204ENST00000465650 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.13
KCTD3-204ENST00000465650 SPDYE6P0CI01 402 aa14.21□□□□□ -0.13
KCTD3-204ENST00000465650 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
KCTD3-204ENST00000465650 CLEC11AQ9Y240 323 aa14.14□□□□□ -0.15
KCTD3-204ENST00000465650 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
KCTD3-204ENST00000465650 FBLN2P98095 1184 aa14.09□□□□□ -0.15
KCTD3-204ENST00000465650 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
KCTD3-204ENST00000465650 MKRN4PQ13434 485 aaPredicted RBP14.05□□□□□ -0.16
KCTD3-204ENST00000465650 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
KCTD3-204ENST00000465650 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.17
KCTD3-204ENST00000465650 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
KCTD3-204ENST00000465650 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
KCTD3-204ENST00000465650 PLSCR2Q9NRY7 297 aa13.85□□□□□ -0.19
KCTD3-204ENST00000465650 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
KCTD3-204ENST00000465650 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
KCTD3-204ENST00000465650 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
KCTD3-204ENST00000465650 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
KCTD3-204ENST00000465650 CLCN6P51797 869 aa13.6□□□□□ -0.23
KCTD3-204ENST00000465650 DCBLD2Q96PD2 775 aa13.6□□□□□ -0.23
KCTD3-204ENST00000465650 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
KCTD3-204ENST00000465650 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
KCTD3-204ENST00000465650 POTEB2H3BUK9 544 aa13.54□□□□□ -0.24
KCTD3-204ENST00000465650 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
KCTD3-204ENST00000465650 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
KCTD3-204ENST00000465650 POTEMA6NI47 508 aa13.44□□□□□ -0.26
KCTD3-204ENST00000465650 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
KCTD3-204ENST00000465650 POTEGQ6S5H5 508 aa13.38□□□□□ -0.27
KCTD3-204ENST00000465650 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
KCTD3-204ENST00000465650 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
KCTD3-204ENST00000465650 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
KCTD3-204ENST00000465650 LCE2DQ5TA82 110 aaPredicted RBP13.21□□□□□ -0.29
KCTD3-204ENST00000465650 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
KCTD3-204ENST00000465650 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
KCTD3-204ENST00000465650 PCDH10Q9P2E7 1040 aa13.15□□□□□ -0.3
KCTD3-204ENST00000465650 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
KCTD3-204ENST00000465650 ASTLQ6HA08 431 aaPredicted RBP13.13□□□□□ -0.31
KCTD3-204ENST00000465650 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
KCTD3-204ENST00000465650 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms