RNA–Protein interactions for RNA: ENST00000464981.1

PCDH19-204, Transcript of protocadherin 19, humanhuman

TSL 3

Gene PCDH19, Length 329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-204ENST00000464981 AEBP2Q6ZN18 517 aaPredicted RBP29■■■□□ 2.23
PCDH19-204ENST00000464981 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
PCDH19-204ENST00000464981 PHF23Q9BUL5 403 aaPredicted RBP24.75■■□□□ 1.55
PCDH19-204ENST00000464981 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
PCDH19-204ENST00000464981 FOXD1Q16676 465 aa22.84■■□□□ 1.25
PCDH19-204ENST00000464981 PLPPR3Q6T4P5 718 aa22.68■■□□□ 1.22
PCDH19-204ENST00000464981 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
PCDH19-204ENST00000464981 ADRA2BP18089 450 aa21.85■■□□□ 1.09
PCDH19-204ENST00000464981 PIAS4Q8N2W9 510 aaPredicted RBP21.46■■□□□ 1.03
PCDH19-204ENST00000464981 MSH5O43196 834 aa21.01■□□□□ 0.95
PCDH19-204ENST00000464981 PPP4R3CPQ6ZMV5 832 aa20.01■□□□□ 0.79
PCDH19-204ENST00000464981 MAPK8IP2Q13387 824 aaPredicted RBP19.89■□□□□ 0.77
PCDH19-204ENST00000464981 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
PCDH19-204ENST00000464981 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
PCDH19-204ENST00000464981 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
PCDH19-204ENST00000464981 CNKSR2Q8WXI2 1034 aa19.44■□□□□ 0.7
PCDH19-204ENST00000464981 KCNA4P22459 653 aa19.42■□□□□ 0.7
PCDH19-204ENST00000464981 NCBP3Q53F19 620 aaKnown RBP19.35■□□□□ 0.69
PCDH19-204ENST00000464981 NPM3O75607 178 aaKnown RBP19.18■□□□□ 0.66
PCDH19-204ENST00000464981 RNF216Q9NWF9 866 aaPredicted RBP19.11■□□□□ 0.65
PCDH19-204ENST00000464981 HOXD11P31277 338 aaPredicted RBP19.1■□□□□ 0.65
PCDH19-204ENST00000464981 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
PCDH19-204ENST00000464981 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.56
PCDH19-204ENST00000464981 SLC4A1APQ9BWU0 796 aaKnown RBP18.41■□□□□ 0.54
PCDH19-204ENST00000464981 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
PCDH19-204ENST00000464981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCDH19-204ENST00000464981 RNF39Q9H2S5 420 aa18.07■□□□□ 0.48
PCDH19-204ENST00000464981 ZBTB22O15209 634 aa17.94■□□□□ 0.46
PCDH19-204ENST00000464981 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
PCDH19-204ENST00000464981 FOXD4L1Q9NU39 408 aa17.85■□□□□ 0.45
PCDH19-204ENST00000464981 C1QBPQ07021 282 aaKnown RBP17.77■□□□□ 0.44
PCDH19-204ENST00000464981 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
PCDH19-204ENST00000464981 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
PCDH19-204ENST00000464981 MYCNP04198 464 aaPredicted RBP17.66■□□□□ 0.42
PCDH19-204ENST00000464981 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
PCDH19-204ENST00000464981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
PCDH19-204ENST00000464981 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
PCDH19-204ENST00000464981 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
PCDH19-204ENST00000464981 SAMD1Q6SPF0 538 aaPredicted RBP17.47■□□□□ 0.39
PCDH19-204ENST00000464981 CAPN15O75808 1086 aa17.36■□□□□ 0.37
PCDH19-204ENST00000464981 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.36
PCDH19-204ENST00000464981 APLP2Q06481 763 aa17.32■□□□□ 0.36
PCDH19-204ENST00000464981 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
PCDH19-204ENST00000464981 ATXN8OSP0DMR3 200 aa17.19■□□□□ 0.34
PCDH19-204ENST00000464981 ZNF219Q9P2Y4 722 aaPredicted RBP17.18■□□□□ 0.34
PCDH19-204ENST00000464981 DSG3P32926 999 aa17.14■□□□□ 0.33
PCDH19-204ENST00000464981 ABCB7O75027 752 aa17.07■□□□□ 0.32
PCDH19-204ENST00000464981 POLA2Q14181 598 aa16.94■□□□□ 0.3
PCDH19-204ENST00000464981 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
PCDH19-204ENST00000464981 MKRN4PQ13434 485 aaPredicted RBP16.55■□□□□ 0.24
PCDH19-204ENST00000464981 FBLN2P98095 1184 aa16.45■□□□□ 0.22
PCDH19-204ENST00000464981 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
PCDH19-204ENST00000464981 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
PCDH19-204ENST00000464981 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
PCDH19-204ENST00000464981 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
PCDH19-204ENST00000464981 SPDYE2Q495Y8 402 aa16.15■□□□□ 0.18
PCDH19-204ENST00000464981 ZNF692Q9BU19 519 aaPredicted RBP16.07■□□□□ 0.16
PCDH19-204ENST00000464981 SSUH2Q9Y2M2 353 aa16.06■□□□□ 0.16
PCDH19-204ENST00000464981 SPDYE4A6NLX3 237 aa16.03■□□□□ 0.16
PCDH19-204ENST00000464981 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
PCDH19-204ENST00000464981 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
PCDH19-204ENST00000464981 FKBP8Q14318 412 aa15.92■□□□□ 0.14
PCDH19-204ENST00000464981 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
PCDH19-204ENST00000464981 PITPNM1O00562 1244 aa15.78■□□□□ 0.12
PCDH19-204ENST00000464981 PROM2Q8N271 834 aa15.78■□□□□ 0.12
PCDH19-204ENST00000464981 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
PCDH19-204ENST00000464981 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
PCDH19-204ENST00000464981 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
PCDH19-204ENST00000464981 PIP4P2Q8N4L2 257 aa15.5■□□□□ 0.07
PCDH19-204ENST00000464981 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
PCDH19-204ENST00000464981 PRR29P0C7W0 189 aa15.48■□□□□ 0.07
PCDH19-204ENST00000464981 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.07
PCDH19-204ENST00000464981 POTEHQ6S545 545 aa15.38■□□□□ 0.05
PCDH19-204ENST00000464981 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
PCDH19-204ENST00000464981 PRKAR2AP13861 404 aaKnown RBP15.35■□□□□ 0.05
PCDH19-204ENST00000464981 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
PCDH19-204ENST00000464981 FBXO3Q9UK99 471 aa15.29■□□□□ 0.04
PCDH19-204ENST00000464981 VASPP50552 380 aaPredicted RBP15.19■□□□□ 0.02
PCDH19-204ENST00000464981 MIER1Q8N108 512 aa15.18■□□□□ 0.02
PCDH19-204ENST00000464981 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
PCDH19-204ENST00000464981 FARP1Q9Y4F1 1045 aaPredicted RBP15.16■□□□□ 0.02
PCDH19-204ENST00000464981 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
PCDH19-204ENST00000464981 PLEKHG5O94827 1062 aa15.02■□□□□ -0
PCDH19-204ENST00000464981 IFNLR1Q8IU57 520 aaPredicted RBP15□□□□□ -0.01
PCDH19-204ENST00000464981 HAX1O00165 279 aa14.99□□□□□ -0.01
PCDH19-204ENST00000464981 C19orf67A6NJJ6 358 aa14.97□□□□□ -0.01
PCDH19-204ENST00000464981 EVX2Q03828 476 aa14.96□□□□□ -0.01
PCDH19-204ENST00000464981 NPM1P06748 294 aaKnown RBP eCLIP14.94□□□□□ -0.02
PCDH19-204ENST00000464981 ZBTB47Q9UFB7 747 aaPredicted RBP14.91□□□□□ -0.02
PCDH19-204ENST00000464981 CD44P16070 742 aaKnown RBP14.9□□□□□ -0.02
PCDH19-204ENST00000464981 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
PCDH19-204ENST00000464981 NUBP1P53384 320 aa14.88□□□□□ -0.03
PCDH19-204ENST00000464981 RASEFQ8IZ41 740 aa14.87□□□□□ -0.03
PCDH19-204ENST00000464981 SPOCK2Q92563 424 aa14.78□□□□□ -0.04
PCDH19-204ENST00000464981 TSPYL2Q9H2G4 693 aaPredicted RBP14.78□□□□□ -0.04
PCDH19-204ENST00000464981 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
PCDH19-204ENST00000464981 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
PCDH19-204ENST00000464981 SP7Q8TDD2 431 aaPredicted RBP14.72□□□□□ -0.05
PCDH19-204ENST00000464981 ZNF579Q8NAF0 562 aaKnown RBP14.7□□□□□ -0.06
PCDH19-204ENST00000464981 PHF12Q96QT6 1004 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms