RNA–Protein interactions for RNA: ENST00000462893.1

NVL-207, Transcript of nuclear VCP-like, humanhuman

TSL 2

Gene NVL, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-207ENST00000462893 AEBP2Q6ZN18 517 aaPredicted RBP30.13■■■□□ 2.41
NVL-207ENST00000462893 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
NVL-207ENST00000462893 SENP3Q9H4L4 574 aaPredicted RBP25.82■■□□□ 1.72
NVL-207ENST00000462893 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
NVL-207ENST00000462893 FOXD1Q16676 465 aa24.08■■□□□ 1.45
NVL-207ENST00000462893 POTEDQ86YR6 584 aa23.32■■□□□ 1.32
NVL-207ENST00000462893 MSH5O43196 834 aa22.84■■□□□ 1.25
NVL-207ENST00000462893 PIAS4Q8N2W9 510 aaPredicted RBP22.43■■□□□ 1.18
NVL-207ENST00000462893 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
NVL-207ENST00000462893 PPP6R1Q9UPN7 881 aa22.19■■□□□ 1.14
NVL-207ENST00000462893 ADRA2BP18089 450 aa22.11■■□□□ 1.13
NVL-207ENST00000462893 MAPK8IP2Q13387 824 aaPredicted RBP20.42■□□□□ 0.86
NVL-207ENST00000462893 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
NVL-207ENST00000462893 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
NVL-207ENST00000462893 CACNB1Q02641 598 aaPredicted RBP20■□□□□ 0.79
NVL-207ENST00000462893 DCAF8L1A6NGE4 600 aa19.61■□□□□ 0.73
NVL-207ENST00000462893 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.72
NVL-207ENST00000462893 HOXD11P31277 338 aaPredicted RBP19.48■□□□□ 0.71
NVL-207ENST00000462893 RNF39Q9H2S5 420 aa19.38■□□□□ 0.69
NVL-207ENST00000462893 CNKSR2Q8WXI2 1034 aa19.32■□□□□ 0.68
NVL-207ENST00000462893 RNF216Q9NWF9 866 aaPredicted RBP19.25■□□□□ 0.67
NVL-207ENST00000462893 C1QBPQ07021 282 aaKnown RBP19.11■□□□□ 0.65
NVL-207ENST00000462893 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
NVL-207ENST00000462893 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
NVL-207ENST00000462893 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
NVL-207ENST00000462893 KCNA4P22459 653 aa18.7■□□□□ 0.58
NVL-207ENST00000462893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.6■□□□□ 0.571e-6■■■■□ 21.3
NVL-207ENST00000462893 NPM3O75607 178 aaKnown RBP18.43■□□□□ 0.54
NVL-207ENST00000462893 POTEHQ6S545 545 aa18.18■□□□□ 0.5
NVL-207ENST00000462893 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.49
NVL-207ENST00000462893 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
NVL-207ENST00000462893 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
NVL-207ENST00000462893 CAPN15O75808 1086 aa18.01■□□□□ 0.47
NVL-207ENST00000462893 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
NVL-207ENST00000462893 DSG3P32926 999 aa17.97■□□□□ 0.47
NVL-207ENST00000462893 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
NVL-207ENST00000462893 APLP2Q06481 763 aa17.65■□□□□ 0.42
NVL-207ENST00000462893 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
NVL-207ENST00000462893 SLC24A1O60721 1099 aa17.59■□□□□ 0.41
NVL-207ENST00000462893 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.4
NVL-207ENST00000462893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
NVL-207ENST00000462893 ABCB7O75027 752 aa17.53■□□□□ 0.4
NVL-207ENST00000462893 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
NVL-207ENST00000462893 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
NVL-207ENST00000462893 AMER1Q5JTC6 1135 aaPredicted RBP17.24■□□□□ 0.35
NVL-207ENST00000462893 RBM42Q9BTD8 480 aaKnown RBP17.21■□□□□ 0.35
NVL-207ENST00000462893 ZBTB22O15209 634 aa17.16■□□□□ 0.34
NVL-207ENST00000462893 RTN4Q9NQC3 1192 aaKnown RBP17.09■□□□□ 0.33
NVL-207ENST00000462893 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
NVL-207ENST00000462893 POLA2Q14181 598 aa17.04■□□□□ 0.32
NVL-207ENST00000462893 CHRDL2Q6WN34 429 aa17.03■□□□□ 0.32
NVL-207ENST00000462893 FOXD4L1Q9NU39 408 aa16.97■□□□□ 0.31
NVL-207ENST00000462893 SP7Q8TDD2 431 aaPredicted RBP16.74■□□□□ 0.27
NVL-207ENST00000462893 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
NVL-207ENST00000462893 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
NVL-207ENST00000462893 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
NVL-207ENST00000462893 REM2Q8IYK8 340 aaPredicted RBP16.53■□□□□ 0.24
NVL-207ENST00000462893 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
NVL-207ENST00000462893 PIP4P2Q8N4L2 257 aa16.47■□□□□ 0.23
NVL-207ENST00000462893 FKBP8Q14318 412 aa16.42■□□□□ 0.22
NVL-207ENST00000462893 HAX1O00165 279 aa16.41■□□□□ 0.22
NVL-207ENST00000462893 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
NVL-207ENST00000462893 FXR2P51116 673 aaKnown RBP eCLIP16.3■□□□□ 0.2
NVL-207ENST00000462893 ATXN8OSP0DMR3 200 aa16.28■□□□□ 0.2
NVL-207ENST00000462893 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
NVL-207ENST00000462893 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
NVL-207ENST00000462893 SPDYE2Q495Y8 402 aa16.13■□□□□ 0.17
NVL-207ENST00000462893 FBLN2P98095 1184 aa16.12■□□□□ 0.17
NVL-207ENST00000462893 EVX2Q03828 476 aa16.06■□□□□ 0.16
NVL-207ENST00000462893 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
NVL-207ENST00000462893 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
NVL-207ENST00000462893 PRKAR2AP13861 404 aaKnown RBP15.94■□□□□ 0.14
NVL-207ENST00000462893 MKRN4PQ13434 485 aaPredicted RBP15.88■□□□□ 0.13
NVL-207ENST00000462893 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
NVL-207ENST00000462893 SSUH2Q9Y2M2 353 aa15.84■□□□□ 0.13
NVL-207ENST00000462893 C19orf67A6NJJ6 358 aa15.78■□□□□ 0.12
NVL-207ENST00000462893 PLCB2Q00722 1185 aa15.78■□□□□ 0.12
NVL-207ENST00000462893 GABBR2O75899 941 aa15.71■□□□□ 0.11
NVL-207ENST00000462893 LHX8Q68G74 356 aa15.71■□□□□ 0.11
NVL-207ENST00000462893 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
NVL-207ENST00000462893 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
NVL-207ENST00000462893 BCANQ96GW7 911 aa15.63■□□□□ 0.09
NVL-207ENST00000462893 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
NVL-207ENST00000462893 FBXO3Q9UK99 471 aa15.6■□□□□ 0.09
NVL-207ENST00000462893 HAP1P54257 671 aaPredicted RBP15.59■□□□□ 0.09
NVL-207ENST00000462893 DCAF8L2P0C7V8 631 aa15.44■□□□□ 0.06
NVL-207ENST00000462893 CD44P16070 742 aaKnown RBP15.41■□□□□ 0.06
NVL-207ENST00000462893 FARP1Q9Y4F1 1045 aaPredicted RBP15.4■□□□□ 0.06
NVL-207ENST00000462893 VSIG10Q8N0Z9 540 aa15.38■□□□□ 0.05
NVL-207ENST00000462893 TAOK2Q9UL54 1235 aa15.38■□□□□ 0.05
NVL-207ENST00000462893 POTEIP0CG38 1075 aa15.33■□□□□ 0.04
NVL-207ENST00000462893 PRKCSHP14314 528 aaPredicted RBP15.33■□□□□ 0.04
NVL-207ENST00000462893 CLCN6P51797 869 aa15.33■□□□□ 0.04
NVL-207ENST00000462893 VASPP50552 380 aaPredicted RBP15.26■□□□□ 0.03
NVL-207ENST00000462893 PLSCR2Q9NRY7 297 aa15.25■□□□□ 0.03
NVL-207ENST00000462893 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
NVL-207ENST00000462893 DCBLD2Q96PD2 775 aa15.22■□□□□ 0.03
NVL-207ENST00000462893 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
NVL-207ENST00000462893 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.15■□□□□ 0.02
NVL-207ENST00000462893 TPRNQ4KMQ1 711 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms