RNA–Protein interactions for RNA: ENST00000462754.1

TMEM106B-207, Transcript of transmembrane protein 106B, humanhuman

TSL 2

Gene TMEM106B, Length 699 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106B-207ENST00000462754 AEBP2Q6ZN18 517 aaPredicted RBP27.42■■□□□ 1.98
TMEM106B-207ENST00000462754 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
TMEM106B-207ENST00000462754 PHF23Q9BUL5 403 aaPredicted RBP23.37■■□□□ 1.33
TMEM106B-207ENST00000462754 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
TMEM106B-207ENST00000462754 FOXD1Q16676 465 aa21.63■■□□□ 1.05
TMEM106B-207ENST00000462754 PLPPR3Q6T4P5 718 aa21.46■■□□□ 1.03
TMEM106B-207ENST00000462754 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
TMEM106B-207ENST00000462754 ADRA2BP18089 450 aa20.6■□□□□ 0.89
TMEM106B-207ENST00000462754 PIAS4Q8N2W9 510 aaPredicted RBP20.29■□□□□ 0.84
TMEM106B-207ENST00000462754 MSH5O43196 834 aa20■□□□□ 0.79
TMEM106B-207ENST00000462754 POTEDQ86YR6 584 aa19.06■□□□□ 0.64
TMEM106B-207ENST00000462754 PPP4R3CPQ6ZMV5 832 aa18.88■□□□□ 0.61
TMEM106B-207ENST00000462754 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
TMEM106B-207ENST00000462754 MAPK8IP2Q13387 824 aaPredicted RBP18.75■□□□□ 0.59
TMEM106B-207ENST00000462754 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
TMEM106B-207ENST00000462754 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
TMEM106B-207ENST00000462754 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
TMEM106B-207ENST00000462754 KCNA4P22459 653 aa18.23■□□□□ 0.51
TMEM106B-207ENST00000462754 HOXD11P31277 338 aaPredicted RBP18.13■□□□□ 0.49
TMEM106B-207ENST00000462754 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
TMEM106B-207ENST00000462754 NPM3O75607 178 aaKnown RBP18.08■□□□□ 0.48
TMEM106B-207ENST00000462754 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
TMEM106B-207ENST00000462754 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
TMEM106B-207ENST00000462754 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
TMEM106B-207ENST00000462754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
TMEM106B-207ENST00000462754 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
TMEM106B-207ENST00000462754 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
TMEM106B-207ENST00000462754 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
TMEM106B-207ENST00000462754 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
TMEM106B-207ENST00000462754 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
TMEM106B-207ENST00000462754 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
TMEM106B-207ENST00000462754 ZBTB22O15209 634 aa16.81■□□□□ 0.28
TMEM106B-207ENST00000462754 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
TMEM106B-207ENST00000462754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
TMEM106B-207ENST00000462754 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
TMEM106B-207ENST00000462754 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
TMEM106B-207ENST00000462754 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
TMEM106B-207ENST00000462754 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
TMEM106B-207ENST00000462754 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
TMEM106B-207ENST00000462754 APLP2Q06481 763 aa16.47■□□□□ 0.23
TMEM106B-207ENST00000462754 CAPN15O75808 1086 aa16.37■□□□□ 0.21
TMEM106B-207ENST00000462754 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
TMEM106B-207ENST00000462754 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
TMEM106B-207ENST00000462754 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
TMEM106B-207ENST00000462754 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
TMEM106B-207ENST00000462754 DSG3P32926 999 aa16.24■□□□□ 0.19
TMEM106B-207ENST00000462754 ABCB7O75027 752 aa16.06■□□□□ 0.16
TMEM106B-207ENST00000462754 POLA2Q14181 598 aa15.99■□□□□ 0.15
TMEM106B-207ENST00000462754 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
TMEM106B-207ENST00000462754 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
TMEM106B-207ENST00000462754 FBLN2P98095 1184 aa15.54■□□□□ 0.08
TMEM106B-207ENST00000462754 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
TMEM106B-207ENST00000462754 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
TMEM106B-207ENST00000462754 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
TMEM106B-207ENST00000462754 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
TMEM106B-207ENST00000462754 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
TMEM106B-207ENST00000462754 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
TMEM106B-207ENST00000462754 SSUH2Q9Y2M2 353 aa15.21■□□□□ 0.03
TMEM106B-207ENST00000462754 ZNF692Q9BU19 519 aaPredicted RBP15.16■□□□□ 0.02
TMEM106B-207ENST00000462754 SPDYE4A6NLX3 237 aa15.08■□□□□ 0
TMEM106B-207ENST00000462754 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
TMEM106B-207ENST00000462754 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
TMEM106B-207ENST00000462754 POTEHQ6S545 545 aa14.94□□□□□ -0.02
TMEM106B-207ENST00000462754 PROM2Q8N271 834 aa14.93□□□□□ -0.02
TMEM106B-207ENST00000462754 PITPNM1O00562 1244 aa14.91□□□□□ -0.02
TMEM106B-207ENST00000462754 CHRDL2Q6WN34 429 aa14.89□□□□□ -0.03
TMEM106B-207ENST00000462754 FKBP8Q14318 412 aa14.88□□□□□ -0.03
TMEM106B-207ENST00000462754 SPDYE1Q8NFV5 336 aaPredicted RBP14.87□□□□□ -0.03
TMEM106B-207ENST00000462754 CLEC11AQ9Y240 323 aa14.74□□□□□ -0.05
TMEM106B-207ENST00000462754 FXR2P51116 673 aaKnown RBP eCLIP14.71□□□□□ -0.05
TMEM106B-207ENST00000462754 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
TMEM106B-207ENST00000462754 PIP4P2Q8N4L2 257 aa14.67□□□□□ -0.06
TMEM106B-207ENST00000462754 PRR29P0C7W0 189 aa14.62□□□□□ -0.07
TMEM106B-207ENST00000462754 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
TMEM106B-207ENST00000462754 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
TMEM106B-207ENST00000462754 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
TMEM106B-207ENST00000462754 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
TMEM106B-207ENST00000462754 MNX1P50219 401 aaPredicted RBP14.33□□□□□ -0.12
TMEM106B-207ENST00000462754 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
TMEM106B-207ENST00000462754 MIER1Q8N108 512 aa14.28□□□□□ -0.12
TMEM106B-207ENST00000462754 VASPP50552 380 aaPredicted RBP14.26□□□□□ -0.13
TMEM106B-207ENST00000462754 PLCD3Q8N3E9 789 aa14.23□□□□□ -0.13
TMEM106B-207ENST00000462754 C19orf67A6NJJ6 358 aa14.21□□□□□ -0.13
TMEM106B-207ENST00000462754 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
TMEM106B-207ENST00000462754 HAX1O00165 279 aa14.18□□□□□ -0.14
TMEM106B-207ENST00000462754 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
TMEM106B-207ENST00000462754 EVX2Q03828 476 aa14.13□□□□□ -0.15
TMEM106B-207ENST00000462754 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
TMEM106B-207ENST00000462754 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
TMEM106B-207ENST00000462754 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
TMEM106B-207ENST00000462754 IFNLR1Q8IU57 520 aaPredicted RBP14.06□□□□□ -0.16
TMEM106B-207ENST00000462754 NUBP1P53384 320 aa14.03□□□□□ -0.16
TMEM106B-207ENST00000462754 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
TMEM106B-207ENST00000462754 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
TMEM106B-207ENST00000462754 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
TMEM106B-207ENST00000462754 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
TMEM106B-207ENST00000462754 PAK3O75914 559 aaPredicted RBP13.93□□□□□ -0.18
TMEM106B-207ENST00000462754 SPOCK2Q92563 424 aa13.9□□□□□ -0.18
TMEM106B-207ENST00000462754 TSPYL2Q9H2G4 693 aaPredicted RBP13.89□□□□□ -0.19
TMEM106B-207ENST00000462754 CCDC61Q9Y6R9 512 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms