RNA–Protein interactions for RNA: ENST00000461986.5

USP33-205, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 954 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-205ENST00000461986 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
USP33-205ENST00000461986 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
USP33-205ENST00000461986 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
USP33-205ENST00000461986 PHF23Q9BUL5 403 aaPredicted RBP24.42■■□□□ 1.5
USP33-205ENST00000461986 FOXD1Q16676 465 aa23.08■■□□□ 1.29
USP33-205ENST00000461986 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
USP33-205ENST00000461986 MSH5O43196 834 aa21.61■■□□□ 1.05
USP33-205ENST00000461986 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
USP33-205ENST00000461986 PIAS4Q8N2W9 510 aaPredicted RBP21.54■■□□□ 1.04
USP33-205ENST00000461986 ADRA2BP18089 450 aa21.46■■□□□ 1.03
USP33-205ENST00000461986 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
USP33-205ENST00000461986 KCNA4P22459 653 aa19.83■□□□□ 0.77
USP33-205ENST00000461986 PPP4R3CPQ6ZMV5 832 aa19.77■□□□□ 0.76
USP33-205ENST00000461986 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
USP33-205ENST00000461986 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
USP33-205ENST00000461986 DMRT2Q9Y5R5 561 aa19.63■□□□□ 0.73
USP33-205ENST00000461986 NCBP3Q53F19 620 aaKnown RBP19.5■□□□□ 0.71
USP33-205ENST00000461986 CNKSR2Q8WXI2 1034 aa19.15■□□□□ 0.66
USP33-205ENST00000461986 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
USP33-205ENST00000461986 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
USP33-205ENST00000461986 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
USP33-205ENST00000461986 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
USP33-205ENST00000461986 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.6
USP33-205ENST00000461986 RNF216Q9NWF9 866 aaPredicted RBP18.72■□□□□ 0.59
USP33-205ENST00000461986 CACNB1Q02641 598 aaPredicted RBP18.57■□□□□ 0.56
USP33-205ENST00000461986 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
USP33-205ENST00000461986 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
USP33-205ENST00000461986 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
USP33-205ENST00000461986 ZBTB22O15209 634 aa18.19■□□□□ 0.5
USP33-205ENST00000461986 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
USP33-205ENST00000461986 FOXD4L1Q9NU39 408 aa18.18■□□□□ 0.5
USP33-205ENST00000461986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.47
USP33-205ENST00000461986 SLC4A2P04920 1241 aa17.87■□□□□ 0.45
USP33-205ENST00000461986 MYCNP04198 464 aaPredicted RBP17.7■□□□□ 0.42
USP33-205ENST00000461986 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
USP33-205ENST00000461986 ATXN8OSP0DMR3 200 aa17.54■□□□□ 0.4
USP33-205ENST00000461986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.37
USP33-205ENST00000461986 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
USP33-205ENST00000461986 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
USP33-205ENST00000461986 CAPN15O75808 1086 aa17.31■□□□□ 0.36
USP33-205ENST00000461986 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
USP33-205ENST00000461986 DSG3P32926 999 aa17.26■□□□□ 0.35
USP33-205ENST00000461986 APLP2Q06481 763 aa17.13■□□□□ 0.33
USP33-205ENST00000461986 ATF5Q9Y2D1 282 aaPredicted RBP17.05■□□□□ 0.32
USP33-205ENST00000461986 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
USP33-205ENST00000461986 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
USP33-205ENST00000461986 ABCB7O75027 752 aa16.91■□□□□ 0.3
USP33-205ENST00000461986 FKBP8Q14318 412 aa16.8■□□□□ 0.28
USP33-205ENST00000461986 POTEHQ6S545 545 aa16.6■□□□□ 0.25
USP33-205ENST00000461986 POLA2Q14181 598 aa16.57■□□□□ 0.24
USP33-205ENST00000461986 FBLN2P98095 1184 aa16.48■□□□□ 0.23
USP33-205ENST00000461986 RBM42Q9BTD8 480 aaKnown RBP16.45■□□□□ 0.22
USP33-205ENST00000461986 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
USP33-205ENST00000461986 ZBTB12Q9Y330 459 aaPredicted RBP16.36■□□□□ 0.21
USP33-205ENST00000461986 SPDYE4A6NLX3 237 aa16.33■□□□□ 0.2
USP33-205ENST00000461986 AMER1Q5JTC6 1135 aaPredicted RBP16.25■□□□□ 0.19
USP33-205ENST00000461986 FBXO3Q9UK99 471 aa16.17■□□□□ 0.18
USP33-205ENST00000461986 CHRDL2Q6WN34 429 aa16.12■□□□□ 0.17
USP33-205ENST00000461986 RTN4Q9NQC3 1192 aaKnown RBP16.1■□□□□ 0.17
USP33-205ENST00000461986 PROM2Q8N271 834 aa16.07■□□□□ 0.16
USP33-205ENST00000461986 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
USP33-205ENST00000461986 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
USP33-205ENST00000461986 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
USP33-205ENST00000461986 SPDYE2BA6NHP3 402 aa15.91■□□□□ 0.14
USP33-205ENST00000461986 SPDYE6P0CI01 402 aa15.91■□□□□ 0.14
USP33-205ENST00000461986 SPDYE2Q495Y8 402 aa15.91■□□□□ 0.14
USP33-205ENST00000461986 ZNF692Q9BU19 519 aaPredicted RBP15.91■□□□□ 0.14
USP33-205ENST00000461986 VASPP50552 380 aaPredicted RBP15.85■□□□□ 0.13
USP33-205ENST00000461986 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.12
USP33-205ENST00000461986 PITPNM1O00562 1244 aa15.75■□□□□ 0.11
USP33-205ENST00000461986 PIP4P2Q8N4L2 257 aa15.73■□□□□ 0.11
USP33-205ENST00000461986 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
USP33-205ENST00000461986 STAG3Q9UJ98 1225 aa15.69■□□□□ 0.1
USP33-205ENST00000461986 FXR2P51116 673 aaKnown RBP eCLIP15.64■□□□□ 0.09
USP33-205ENST00000461986 IFNLR1Q8IU57 520 aaPredicted RBP15.62■□□□□ 0.09
USP33-205ENST00000461986 SP7Q8TDD2 431 aaPredicted RBP15.54■□□□□ 0.08
USP33-205ENST00000461986 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
USP33-205ENST00000461986 PLCD3Q8N3E9 789 aa15.52■□□□□ 0.08
USP33-205ENST00000461986 MIER1Q8N108 512 aa15.46■□□□□ 0.07
USP33-205ENST00000461986 SPDYE1Q8NFV5 336 aaPredicted RBP15.46■□□□□ 0.07
USP33-205ENST00000461986 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
USP33-205ENST00000461986 HAX1O00165 279 aa15.44■□□□□ 0.06
USP33-205ENST00000461986 SLC24A1O60721 1099 aa15.43■□□□□ 0.06
USP33-205ENST00000461986 SPOCK2Q92563 424 aa15.43■□□□□ 0.06
USP33-205ENST00000461986 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
USP33-205ENST00000461986 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
USP33-205ENST00000461986 PRKAR2AP13861 404 aaKnown RBP15.33■□□□□ 0.04
USP33-205ENST00000461986 PKD2Q13563 968 aa15.28■□□□□ 0.04
USP33-205ENST00000461986 EVX2Q03828 476 aa15.27■□□□□ 0.04
USP33-205ENST00000461986 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
USP33-205ENST00000461986 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
USP33-205ENST00000461986 PRR29P0C7W0 189 aa15.17■□□□□ 0.02
USP33-205ENST00000461986 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
USP33-205ENST00000461986 C19orf67A6NJJ6 358 aa15.13■□□□□ 0.01
USP33-205ENST00000461986 CIZ1Q9ULV3 898 aaPredicted RBP15.11■□□□□ 0.01
USP33-205ENST00000461986 TRIM41Q8WV44 630 aa15.04■□□□□ -0
USP33-205ENST00000461986 GSE1Q14687 1217 aa15.02■□□□□ -0
USP33-205ENST00000461986 CREBZFQ9NS37 354 aa15□□□□□ -0.01
USP33-205ENST00000461986 PLCB2Q00722 1185 aa14.98□□□□□ -0.01
USP33-205ENST00000461986 RGL2O15211 777 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms