RNA–Protein interactions for RNA: ENST00000461851.1

NT5C3A-209, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 3

Gene NT5C3A, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-209ENST00000461851 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.61
NT5C3A-209ENST00000461851 CHIC1Q5VXU3 224 aa23.41■■□□□ 1.34
NT5C3A-209ENST00000461851 SENP3Q9H4L4 574 aaPredicted RBP21.51■■□□□ 1.03
NT5C3A-209ENST00000461851 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
NT5C3A-209ENST00000461851 FOXD1Q16676 465 aa20.13■□□□□ 0.81
NT5C3A-209ENST00000461851 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
NT5C3A-209ENST00000461851 MSH5O43196 834 aa19.14■□□□□ 0.65
NT5C3A-209ENST00000461851 PIAS4Q8N2W9 510 aaPredicted RBP18.63■□□□□ 0.57
NT5C3A-209ENST00000461851 PPP6R1Q9UPN7 881 aa18.26■□□□□ 0.51
NT5C3A-209ENST00000461851 ADRA2BP18089 450 aa18.14■□□□□ 0.49
NT5C3A-209ENST00000461851 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
NT5C3A-209ENST00000461851 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
NT5C3A-209ENST00000461851 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
NT5C3A-209ENST00000461851 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
NT5C3A-209ENST00000461851 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
NT5C3A-209ENST00000461851 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
NT5C3A-209ENST00000461851 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
NT5C3A-209ENST00000461851 HOXD11P31277 338 aaPredicted RBP16.02■□□□□ 0.16
NT5C3A-209ENST00000461851 C1QBPQ07021 282 aaKnown RBP15.99■□□□□ 0.15
NT5C3A-209ENST00000461851 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
NT5C3A-209ENST00000461851 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
NT5C3A-209ENST00000461851 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
NT5C3A-209ENST00000461851 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
NT5C3A-209ENST00000461851 POTEHQ6S545 545 aa15.5■□□□□ 0.07
NT5C3A-209ENST00000461851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.033e-6■■■■□ 20.1
NT5C3A-209ENST00000461851 DSG3P32926 999 aa14.97□□□□□ -0.01
NT5C3A-209ENST00000461851 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
NT5C3A-209ENST00000461851 CAPN15O75808 1086 aa14.87□□□□□ -0.03
NT5C3A-209ENST00000461851 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
NT5C3A-209ENST00000461851 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
NT5C3A-209ENST00000461851 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
NT5C3A-209ENST00000461851 ABCB7O75027 752 aa14.46□□□□□ -0.09
NT5C3A-209ENST00000461851 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
NT5C3A-209ENST00000461851 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
NT5C3A-209ENST00000461851 APLP2Q06481 763 aa14.36□□□□□ -0.11
NT5C3A-209ENST00000461851 RBM42Q9BTD8 480 aaKnown RBP14.31□□□□□ -0.12
NT5C3A-209ENST00000461851 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
NT5C3A-209ENST00000461851 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
NT5C3A-209ENST00000461851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
NT5C3A-209ENST00000461851 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
NT5C3A-209ENST00000461851 SP7Q8TDD2 431 aaPredicted RBP14.17□□□□□ -0.14
NT5C3A-209ENST00000461851 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
NT5C3A-209ENST00000461851 POLA2Q14181 598 aa13.9□□□□□ -0.18
NT5C3A-209ENST00000461851 AKT1S1Q96B36 256 aa13.82□□□□□ -0.2
NT5C3A-209ENST00000461851 PIP4P2Q8N4L2 257 aa13.79□□□□□ -0.2
NT5C3A-209ENST00000461851 KCNA4P22459 653 aa13.76□□□□□ -0.21
NT5C3A-209ENST00000461851 HAX1O00165 279 aa13.75□□□□□ -0.21
NT5C3A-209ENST00000461851 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
NT5C3A-209ENST00000461851 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
NT5C3A-209ENST00000461851 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
NT5C3A-209ENST00000461851 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
NT5C3A-209ENST00000461851 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
NT5C3A-209ENST00000461851 EVX2Q03828 476 aa13.52□□□□□ -0.25
NT5C3A-209ENST00000461851 OSCARQ8IYS5 282 aa13.48□□□□□ -0.25
NT5C3A-209ENST00000461851 ATF5Q9Y2D1 282 aaPredicted RBP13.38□□□□□ -0.27
NT5C3A-209ENST00000461851 LHX8Q68G74 356 aa13.29□□□□□ -0.28
NT5C3A-209ENST00000461851 PRKAR2AP13861 404 aaKnown RBP13.19□□□□□ -0.3
NT5C3A-209ENST00000461851 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
NT5C3A-209ENST00000461851 GABBR2O75899 941 aa13.17□□□□□ -0.3
NT5C3A-209ENST00000461851 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
NT5C3A-209ENST00000461851 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
NT5C3A-209ENST00000461851 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
NT5C3A-209ENST00000461851 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
NT5C3A-209ENST00000461851 PLSCR2Q9NRY7 297 aa13.06□□□□□ -0.32
NT5C3A-209ENST00000461851 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
NT5C3A-209ENST00000461851 SPDYE1Q8NFV5 336 aaPredicted RBP13.04□□□□□ -0.32
NT5C3A-209ENST00000461851 FBLN2P98095 1184 aa12.9□□□□□ -0.34
NT5C3A-209ENST00000461851 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
NT5C3A-209ENST00000461851 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
NT5C3A-209ENST00000461851 SLC4A1APQ9BWU0 796 aaKnown RBP12.83□□□□□ -0.36
NT5C3A-209ENST00000461851 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
NT5C3A-209ENST00000461851 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
NT5C3A-209ENST00000461851 ATXN8OSP0DMR3 200 aa12.75□□□□□ -0.37
NT5C3A-209ENST00000461851 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
NT5C3A-209ENST00000461851 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
NT5C3A-209ENST00000461851 CLCN6P51797 869 aa12.72□□□□□ -0.37
NT5C3A-209ENST00000461851 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
NT5C3A-209ENST00000461851 DCBLD2Q96PD2 775 aa12.66□□□□□ -0.38
NT5C3A-209ENST00000461851 ZBTB22O15209 634 aa12.64□□□□□ -0.39
NT5C3A-209ENST00000461851 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
NT5C3A-209ENST00000461851 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
NT5C3A-209ENST00000461851 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
NT5C3A-209ENST00000461851 POTEMA6NI47 508 aa12.55□□□□□ -0.4
NT5C3A-209ENST00000461851 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
NT5C3A-209ENST00000461851 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
NT5C3A-209ENST00000461851 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
NT5C3A-209ENST00000461851 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
NT5C3A-209ENST00000461851 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
NT5C3A-209ENST00000461851 PCDH10Q9P2E7 1040 aa12.39□□□□□ -0.43
NT5C3A-209ENST00000461851 EHMT2Q96KQ7 1210 aa12.3□□□□□ -0.44
NT5C3A-209ENST00000461851 CSRNP3Q8WYN3 585 aa12.25□□□□□ -0.45
NT5C3A-209ENST00000461851 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
NT5C3A-209ENST00000461851 CREBZFQ9NS37 354 aa12.23□□□□□ -0.45
NT5C3A-209ENST00000461851 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
NT5C3A-209ENST00000461851 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
NT5C3A-209ENST00000461851 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
NT5C3A-209ENST00000461851 LCE2DQ5TA82 110 aaPredicted RBP12.15□□□□□ -0.46
NT5C3A-209ENST00000461851 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
NT5C3A-209ENST00000461851 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
NT5C3A-209ENST00000461851 C7P10643 843 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms