RNA–Protein interactions for RNA: ENST00000461125.1

ACTL6A-204, Transcript of actin like 6A, humanhuman

TSL 2

Gene ACTL6A, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-204ENST00000461125 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
ACTL6A-204ENST00000461125 CHIC1Q5VXU3 224 aa28.49■■■□□ 2.15
ACTL6A-204ENST00000461125 PHF23Q9BUL5 403 aaPredicted RBP25.07■■□□□ 1.6
ACTL6A-204ENST00000461125 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
ACTL6A-204ENST00000461125 FOXD1Q16676 465 aa23.22■■□□□ 1.31
ACTL6A-204ENST00000461125 PLPPR3Q6T4P5 718 aa23■■□□□ 1.27
ACTL6A-204ENST00000461125 PPP6R1Q9UPN7 881 aa22.2■■□□□ 1.14
ACTL6A-204ENST00000461125 ADRA2BP18089 450 aa22.14■■□□□ 1.13
ACTL6A-204ENST00000461125 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
ACTL6A-204ENST00000461125 MSH5O43196 834 aa21.43■■□□□ 1.02
ACTL6A-204ENST00000461125 POTEDQ86YR6 584 aa21.15■□□□□ 0.98
ACTL6A-204ENST00000461125 PPP4R3CPQ6ZMV5 832 aa20.27■□□□□ 0.84
ACTL6A-204ENST00000461125 MAPK8IP2Q13387 824 aaPredicted RBP20.16■□□□□ 0.82
ACTL6A-204ENST00000461125 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
ACTL6A-204ENST00000461125 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
ACTL6A-204ENST00000461125 CNKSR2Q8WXI2 1034 aa19.72■□□□□ 0.75
ACTL6A-204ENST00000461125 NCBP3Q53F19 620 aaKnown RBP19.6■□□□□ 0.73
ACTL6A-204ENST00000461125 KCNA4P22459 653 aa19.59■□□□□ 0.73
ACTL6A-204ENST00000461125 NPM3O75607 178 aaKnown RBP19.41■□□□□ 0.7
ACTL6A-204ENST00000461125 HOXD11P31277 338 aaPredicted RBP19.4■□□□□ 0.7
ACTL6A-204ENST00000461125 RNF216Q9NWF9 866 aaPredicted RBP19.4■□□□□ 0.7
ACTL6A-204ENST00000461125 DCAF8L1A6NGE4 600 aa19.01■□□□□ 0.63
ACTL6A-204ENST00000461125 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
ACTL6A-204ENST00000461125 SLC4A1APQ9BWU0 796 aaKnown RBP18.57■□□□□ 0.56
ACTL6A-204ENST00000461125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.44■□□□□ 0.54
ACTL6A-204ENST00000461125 SLC4A2P04920 1241 aa18.4■□□□□ 0.54
ACTL6A-204ENST00000461125 RNF39Q9H2S5 420 aa18.39■□□□□ 0.53
ACTL6A-204ENST00000461125 CACNB1Q02641 598 aaPredicted RBP18.3■□□□□ 0.52
ACTL6A-204ENST00000461125 U3KPZ7 1027 aaPredicted RBP18.19■□□□□ 0.5
ACTL6A-204ENST00000461125 C1QBPQ07021 282 aaKnown RBP18.11■□□□□ 0.49
ACTL6A-204ENST00000461125 ZBTB22O15209 634 aa18.06■□□□□ 0.48
ACTL6A-204ENST00000461125 FOXD4L1Q9NU39 408 aa18.05■□□□□ 0.48
ACTL6A-204ENST00000461125 MYCNP04198 464 aaPredicted RBP17.9■□□□□ 0.46
ACTL6A-204ENST00000461125 EHMT2Q96KQ7 1210 aa17.83■□□□□ 0.44
ACTL6A-204ENST00000461125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
ACTL6A-204ENST00000461125 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
ACTL6A-204ENST00000461125 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
ACTL6A-204ENST00000461125 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
ACTL6A-204ENST00000461125 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
ACTL6A-204ENST00000461125 CAPN15O75808 1086 aa17.63■□□□□ 0.41
ACTL6A-204ENST00000461125 APLP2Q06481 763 aa17.62■□□□□ 0.41
ACTL6A-204ENST00000461125 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
ACTL6A-204ENST00000461125 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
ACTL6A-204ENST00000461125 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
ACTL6A-204ENST00000461125 DSG3P32926 999 aa17.42■□□□□ 0.38
ACTL6A-204ENST00000461125 ATXN8OSP0DMR3 200 aa17.41■□□□□ 0.38
ACTL6A-204ENST00000461125 ABCB7O75027 752 aa17.32■□□□□ 0.36
ACTL6A-204ENST00000461125 POLA2Q14181 598 aa17.18■□□□□ 0.34
ACTL6A-204ENST00000461125 ZBTB12Q9Y330 459 aaPredicted RBP16.82■□□□□ 0.28
ACTL6A-204ENST00000461125 MKRN4PQ13434 485 aaPredicted RBP16.73■□□□□ 0.27
ACTL6A-204ENST00000461125 FBLN2P98095 1184 aa16.68■□□□□ 0.26
ACTL6A-204ENST00000461125 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
ACTL6A-204ENST00000461125 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
ACTL6A-204ENST00000461125 POTEHQ6S545 545 aa16.5■□□□□ 0.23
ACTL6A-204ENST00000461125 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
ACTL6A-204ENST00000461125 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
ACTL6A-204ENST00000461125 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
ACTL6A-204ENST00000461125 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
ACTL6A-204ENST00000461125 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
ACTL6A-204ENST00000461125 SSUH2Q9Y2M2 353 aa16.28■□□□□ 0.2
ACTL6A-204ENST00000461125 SPDYE4A6NLX3 237 aa16.19■□□□□ 0.18
ACTL6A-204ENST00000461125 REM2Q8IYK8 340 aaPredicted RBP16.19■□□□□ 0.18
ACTL6A-204ENST00000461125 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
ACTL6A-204ENST00000461125 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
ACTL6A-204ENST00000461125 FKBP8Q14318 412 aa16.02■□□□□ 0.16
ACTL6A-204ENST00000461125 CHRDL2Q6WN34 429 aa15.99■□□□□ 0.15
ACTL6A-204ENST00000461125 SPDYE1Q8NFV5 336 aaPredicted RBP15.95■□□□□ 0.14
ACTL6A-204ENST00000461125 PROM2Q8N271 834 aa15.94■□□□□ 0.14
ACTL6A-204ENST00000461125 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
ACTL6A-204ENST00000461125 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.11
ACTL6A-204ENST00000461125 PIP4P2Q8N4L2 257 aa15.75■□□□□ 0.11
ACTL6A-204ENST00000461125 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
ACTL6A-204ENST00000461125 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
ACTL6A-204ENST00000461125 PRKAR2AP13861 404 aaKnown RBP15.6■□□□□ 0.09
ACTL6A-204ENST00000461125 CHADLQ6NUI6 762 aa15.58■□□□□ 0.08
ACTL6A-204ENST00000461125 CREBZFQ9NS37 354 aa15.51■□□□□ 0.07
ACTL6A-204ENST00000461125 FBXO3Q9UK99 471 aa15.45■□□□□ 0.06
ACTL6A-204ENST00000461125 FARP1Q9Y4F1 1045 aaPredicted RBP15.38■□□□□ 0.05
ACTL6A-204ENST00000461125 MNX1P50219 401 aaPredicted RBP15.35■□□□□ 0.05
ACTL6A-204ENST00000461125 MIER1Q8N108 512 aa15.35■□□□□ 0.05
ACTL6A-204ENST00000461125 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
ACTL6A-204ENST00000461125 VASPP50552 380 aaPredicted RBP15.3■□□□□ 0.04
ACTL6A-204ENST00000461125 PLCD3Q8N3E9 789 aa15.3■□□□□ 0.04
ACTL6A-204ENST00000461125 HAX1O00165 279 aa15.27■□□□□ 0.04
ACTL6A-204ENST00000461125 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
ACTL6A-204ENST00000461125 C19orf67A6NJJ6 358 aa15.22■□□□□ 0.03
ACTL6A-204ENST00000461125 EVX2Q03828 476 aa15.2■□□□□ 0.02
ACTL6A-204ENST00000461125 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
ACTL6A-204ENST00000461125 CD44P16070 742 aaKnown RBP15.14■□□□□ 0.01
ACTL6A-204ENST00000461125 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
ACTL6A-204ENST00000461125 IFNLR1Q8IU57 520 aaPredicted RBP15.11■□□□□ 0.01
ACTL6A-204ENST00000461125 RASEFQ8IZ41 740 aa15.04■□□□□ -0
ACTL6A-204ENST00000461125 KLHL34Q8N239 644 aa15.04■□□□□ -0
ACTL6A-204ENST00000461125 NUBP1P53384 320 aa15.03■□□□□ -0
ACTL6A-204ENST00000461125 ZRANB1Q9UGI0 708 aa15.01□□□□□ -0.01
ACTL6A-204ENST00000461125 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
ACTL6A-204ENST00000461125 TSPYL2Q9H2G4 693 aaPredicted RBP14.97□□□□□ -0.01
ACTL6A-204ENST00000461125 ZNF579Q8NAF0 562 aaKnown RBP14.94□□□□□ -0.02
ACTL6A-204ENST00000461125 SPOCK2Q92563 424 aa14.9□□□□□ -0.02
ACTL6A-204ENST00000461125 CCDC61Q9Y6R9 512 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms