RNA–Protein interactions for RNA: ENST00000454474.2

LRRC9-203, Transcript of leucine rich repeat containing 9, humanhuman

TSL 5

Gene LRRC9, Length 880 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9-203ENST00000454474 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
LRRC9-203ENST00000454474 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
LRRC9-203ENST00000454474 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
LRRC9-203ENST00000454474 SENP3Q9H4L4 574 aaPredicted RBP24.43■■□□□ 1.5
LRRC9-203ENST00000454474 FOXD1Q16676 465 aa22.76■■□□□ 1.23
LRRC9-203ENST00000454474 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
LRRC9-203ENST00000454474 PPP6R1Q9UPN7 881 aa21.62■■□□□ 1.05
LRRC9-203ENST00000454474 ADRA2BP18089 450 aa21.61■■□□□ 1.05
LRRC9-203ENST00000454474 PIAS4Q8N2W9 510 aaPredicted RBP21.27■■□□□ 1
LRRC9-203ENST00000454474 MSH5O43196 834 aa21.25■□□□□ 0.99
LRRC9-203ENST00000454474 POTEDQ86YR6 584 aa20.53■□□□□ 0.88
LRRC9-203ENST00000454474 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
LRRC9-203ENST00000454474 PPP4R3CPQ6ZMV5 832 aa19.98■□□□□ 0.79
LRRC9-203ENST00000454474 MAPK8IP2Q13387 824 aaPredicted RBP19.6■□□□□ 0.73
LRRC9-203ENST00000454474 NCBP3Q53F19 620 aaKnown RBP19.55■□□□□ 0.72
LRRC9-203ENST00000454474 CNKSR2Q8WXI2 1034 aa19.49■□□□□ 0.71
LRRC9-203ENST00000454474 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
LRRC9-203ENST00000454474 KCNA4P22459 653 aa19.37■□□□□ 0.69
LRRC9-203ENST00000454474 NPM3O75607 178 aaKnown RBP19.12■□□□□ 0.65
LRRC9-203ENST00000454474 RNF216Q9NWF9 866 aaPredicted RBP19.12■□□□□ 0.65
LRRC9-203ENST00000454474 HOXD11P31277 338 aaPredicted RBP19.04■□□□□ 0.64
LRRC9-203ENST00000454474 DNAJC5BQ9UF47 199 aa18.74■□□□□ 0.59
LRRC9-203ENST00000454474 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
LRRC9-203ENST00000454474 SLC4A1APQ9BWU0 796 aaKnown RBP18.5■□□□□ 0.55
LRRC9-203ENST00000454474 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
LRRC9-203ENST00000454474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.14■□□□□ 0.49
LRRC9-203ENST00000454474 CACNB1Q02641 598 aaPredicted RBP18.12■□□□□ 0.49
LRRC9-203ENST00000454474 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
LRRC9-203ENST00000454474 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
LRRC9-203ENST00000454474 C1QBPQ07021 282 aaKnown RBP17.9■□□□□ 0.46
LRRC9-203ENST00000454474 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
LRRC9-203ENST00000454474 U3KPZ7 1027 aaPredicted RBP17.77■□□□□ 0.44
LRRC9-203ENST00000454474 ZBTB22O15209 634 aa17.76■□□□□ 0.43
LRRC9-203ENST00000454474 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
LRRC9-203ENST00000454474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
LRRC9-203ENST00000454474 HNRNPUL2Q1KMD3 747 aaKnown RBP17.71■□□□□ 0.43
LRRC9-203ENST00000454474 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
LRRC9-203ENST00000454474 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
LRRC9-203ENST00000454474 APLP2Q06481 763 aa17.58■□□□□ 0.4
LRRC9-203ENST00000454474 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
LRRC9-203ENST00000454474 CAPN15O75808 1086 aa17.26■□□□□ 0.35
LRRC9-203ENST00000454474 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
LRRC9-203ENST00000454474 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
LRRC9-203ENST00000454474 TRHP20396 242 aaPredicted RBP17.14■□□□□ 0.33
LRRC9-203ENST00000454474 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
LRRC9-203ENST00000454474 DSG3P32926 999 aa17.04■□□□□ 0.32
LRRC9-203ENST00000454474 POLA2Q14181 598 aa16.88■□□□□ 0.29
LRRC9-203ENST00000454474 ABCB7O75027 752 aa16.84■□□□□ 0.29
LRRC9-203ENST00000454474 ZBTB12Q9Y330 459 aaPredicted RBP16.72■□□□□ 0.27
LRRC9-203ENST00000454474 FBLN2P98095 1184 aa16.59■□□□□ 0.25
LRRC9-203ENST00000454474 MKRN4PQ13434 485 aaPredicted RBP16.4■□□□□ 0.22
LRRC9-203ENST00000454474 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
LRRC9-203ENST00000454474 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
LRRC9-203ENST00000454474 SPDYE2BA6NHP3 402 aa16.22■□□□□ 0.19
LRRC9-203ENST00000454474 SPDYE6P0CI01 402 aa16.22■□□□□ 0.19
LRRC9-203ENST00000454474 SPDYE2Q495Y8 402 aa16.22■□□□□ 0.19
LRRC9-203ENST00000454474 POTEHQ6S545 545 aa16.11■□□□□ 0.17
LRRC9-203ENST00000454474 ZNF692Q9BU19 519 aaPredicted RBP16.11■□□□□ 0.17
LRRC9-203ENST00000454474 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
LRRC9-203ENST00000454474 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
LRRC9-203ENST00000454474 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
LRRC9-203ENST00000454474 FKBP8Q14318 412 aa16■□□□□ 0.15
LRRC9-203ENST00000454474 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
LRRC9-203ENST00000454474 CHRDL2Q6WN34 429 aa15.84■□□□□ 0.13
LRRC9-203ENST00000454474 REM2Q8IYK8 340 aaPredicted RBP15.84■□□□□ 0.13
LRRC9-203ENST00000454474 PROM2Q8N271 834 aa15.83■□□□□ 0.12
LRRC9-203ENST00000454474 SPDYE1Q8NFV5 336 aaPredicted RBP15.75■□□□□ 0.11
LRRC9-203ENST00000454474 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
LRRC9-203ENST00000454474 FBXO3Q9UK99 471 aa15.62■□□□□ 0.09
LRRC9-203ENST00000454474 PITPNM1O00562 1244 aa15.6■□□□□ 0.09
LRRC9-203ENST00000454474 CLEC11AQ9Y240 323 aa15.6■□□□□ 0.09
LRRC9-203ENST00000454474 PRR29P0C7W0 189 aa15.52■□□□□ 0.08
LRRC9-203ENST00000454474 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
LRRC9-203ENST00000454474 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.06
LRRC9-203ENST00000454474 PLEKHG5O94827 1062 aa15.33■□□□□ 0.04
LRRC9-203ENST00000454474 MIER1Q8N108 512 aa15.3■□□□□ 0.04
LRRC9-203ENST00000454474 VASPP50552 380 aaPredicted RBP15.27■□□□□ 0.04
LRRC9-203ENST00000454474 PLCD3Q8N3E9 789 aa15.26■□□□□ 0.03
LRRC9-203ENST00000454474 PRKAR2AP13861 404 aaKnown RBP15.25■□□□□ 0.03
LRRC9-203ENST00000454474 CREBZFQ9NS37 354 aa15.24■□□□□ 0.03
LRRC9-203ENST00000454474 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
LRRC9-203ENST00000454474 SP7Q8TDD2 431 aaPredicted RBP15.17■□□□□ 0.02
LRRC9-203ENST00000454474 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
LRRC9-203ENST00000454474 HAX1O00165 279 aa15.14■□□□□ 0.01
LRRC9-203ENST00000454474 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
LRRC9-203ENST00000454474 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
LRRC9-203ENST00000454474 KLHL34Q8N239 644 aa15.07■□□□□ 0
LRRC9-203ENST00000454474 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
LRRC9-203ENST00000454474 IFNLR1Q8IU57 520 aaPredicted RBP15.03■□□□□ -0
LRRC9-203ENST00000454474 EVX2Q03828 476 aa15□□□□□ -0.01
LRRC9-203ENST00000454474 SPOCK2Q92563 424 aa14.94□□□□□ -0.02
LRRC9-203ENST00000454474 C19orf67A6NJJ6 358 aa14.93□□□□□ -0.02
LRRC9-203ENST00000454474 NUBP1P53384 320 aa14.87□□□□□ -0.03
LRRC9-203ENST00000454474 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
LRRC9-203ENST00000454474 CD44P16070 742 aaKnown RBP14.81□□□□□ -0.04
LRRC9-203ENST00000454474 FAM212AQ96EL1 285 aa14.8□□□□□ -0.04
LRRC9-203ENST00000454474 GSE1Q14687 1217 aa14.78□□□□□ -0.04
LRRC9-203ENST00000454474 RASEFQ8IZ41 740 aa14.77□□□□□ -0.05
LRRC9-203ENST00000454474 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
LRRC9-203ENST00000454474 TSPYL2Q9H2G4 693 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms