RNA–Protein interactions for RNA: ENST00000421461.6

NEB-207, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-207ENST00000421461 AEBP2Q6ZN18 517 aaPredicted RBP19.82■□□□□ 0.76
NEB-207ENST00000421461 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
NEB-207ENST00000421461 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
NEB-207ENST00000421461 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
NEB-207ENST00000421461 FOXD1Q16676 465 aa15.96■□□□□ 0.15
NEB-207ENST00000421461 POTEDQ86YR6 584 aa15.88■□□□□ 0.13
NEB-207ENST00000421461 MSH5O43196 834 aa15.29■□□□□ 0.04
NEB-207ENST00000421461 PIAS4Q8N2W9 510 aaPredicted RBP14.77□□□□□ -0.05
NEB-207ENST00000421461 PPP6R1Q9UPN7 881 aa14.4□□□□□ -0.1
NEB-207ENST00000421461 PLPPR3Q6T4P5 718 aa14.39□□□□□ -0.11
NEB-207ENST00000421461 ADRA2BP18089 450 aa14.31□□□□□ -0.12
NEB-207ENST00000421461 DMRT2Q9Y5R5 561 aa13.47□□□□□ -0.25
NEB-207ENST00000421461 CACNB1Q02641 598 aaPredicted RBP13.43□□□□□ -0.26
NEB-207ENST00000421461 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
NEB-207ENST00000421461 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
NEB-207ENST00000421461 RNF39Q9H2S5 420 aa12.94□□□□□ -0.34
NEB-207ENST00000421461 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
NEB-207ENST00000421461 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
NEB-207ENST00000421461 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
NEB-207ENST00000421461 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
NEB-207ENST00000421461 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
NEB-207ENST00000421461 PPP4R3CPQ6ZMV5 832 aa12.48□□□□□ -0.41
NEB-207ENST00000421461 CNKSR2Q8WXI2 1034 aa12.45□□□□□ -0.42
NEB-207ENST00000421461 POTEHQ6S545 545 aa12.34□□□□□ -0.43
NEB-207ENST00000421461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.11□□□□□ -0.47
NEB-207ENST00000421461 NCBP3Q53F19 620 aaKnown RBP11.91□□□□□ -0.5
NEB-207ENST00000421461 DSG3P32926 999 aa11.89□□□□□ -0.51
NEB-207ENST00000421461 CAPN15O75808 1086 aa11.78□□□□□ -0.52
NEB-207ENST00000421461 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
NEB-207ENST00000421461 SPINK5Q9NQ38 1064 aaPredicted RBP11.72□□□□□ -0.53
NEB-207ENST00000421461 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
NEB-207ENST00000421461 APLP2Q06481 763 aa11.53□□□□□ -0.56
NEB-207ENST00000421461 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
NEB-207ENST00000421461 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
NEB-207ENST00000421461 TRHP20396 242 aaPredicted RBP11.42□□□□□ -0.58
NEB-207ENST00000421461 ABCB7O75027 752 aa11.39□□□□□ -0.59
NEB-207ENST00000421461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
NEB-207ENST00000421461 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
NEB-207ENST00000421461 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
NEB-207ENST00000421461 SP7Q8TDD2 431 aaPredicted RBP11.29□□□□□ -0.6
NEB-207ENST00000421461 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
NEB-207ENST00000421461 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
NEB-207ENST00000421461 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
NEB-207ENST00000421461 POLA2Q14181 598 aa11.01□□□□□ -0.65
NEB-207ENST00000421461 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
NEB-207ENST00000421461 HAX1O00165 279 aa10.92□□□□□ -0.66
NEB-207ENST00000421461 REM2Q8IYK8 340 aaPredicted RBP10.87□□□□□ -0.67
NEB-207ENST00000421461 ZBTB12Q9Y330 459 aaPredicted RBP10.85□□□□□ -0.67
NEB-207ENST00000421461 MYCNP04198 464 aaPredicted RBP10.82□□□□□ -0.68
NEB-207ENST00000421461 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
NEB-207ENST00000421461 KCNA4P22459 653 aa10.8□□□□□ -0.68
NEB-207ENST00000421461 PITPNM1O00562 1244 aa10.72□□□□□ -0.69
NEB-207ENST00000421461 EVX2Q03828 476 aa10.66□□□□□ -0.7
NEB-207ENST00000421461 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
NEB-207ENST00000421461 LHX8Q68G74 356 aa10.58□□□□□ -0.72
NEB-207ENST00000421461 C19orf67A6NJJ6 358 aa10.49□□□□□ -0.73
NEB-207ENST00000421461 ATF5Q9Y2D1 282 aaPredicted RBP10.49□□□□□ -0.73
NEB-207ENST00000421461 GABBR2O75899 941 aa10.47□□□□□ -0.73
NEB-207ENST00000421461 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.73
NEB-207ENST00000421461 SPDYE2BA6NHP3 402 aa10.42□□□□□ -0.74
NEB-207ENST00000421461 SPDYE6P0CI01 402 aa10.42□□□□□ -0.74
NEB-207ENST00000421461 SPDYE2Q495Y8 402 aa10.42□□□□□ -0.74
NEB-207ENST00000421461 SPDYE1Q8NFV5 336 aaPredicted RBP10.39□□□□□ -0.75
NEB-207ENST00000421461 PLSCR2Q9NRY7 297 aa10.35□□□□□ -0.75
NEB-207ENST00000421461 FOXD4L1Q9NU39 408 aa10.35□□□□□ -0.75
NEB-207ENST00000421461 CLEC11AQ9Y240 323 aa10.31□□□□□ -0.76
NEB-207ENST00000421461 CLCN6P51797 869 aa10.29□□□□□ -0.76
NEB-207ENST00000421461 FBLN2P98095 1184 aa10.27□□□□□ -0.77
NEB-207ENST00000421461 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
NEB-207ENST00000421461 ATXN8OSP0DMR3 200 aa10.19□□□□□ -0.78
NEB-207ENST00000421461 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
NEB-207ENST00000421461 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.78
NEB-207ENST00000421461 SLC4A1APQ9BWU0 796 aaKnown RBP10.14□□□□□ -0.79
NEB-207ENST00000421461 CHADLQ6NUI6 762 aa10.13□□□□□ -0.79
NEB-207ENST00000421461 PRR29P0C7W0 189 aa10.12□□□□□ -0.79
NEB-207ENST00000421461 CD44P16070 742 aaKnown RBP10.09□□□□□ -0.79
NEB-207ENST00000421461 DCBLD2Q96PD2 775 aa10.08□□□□□ -0.8
NEB-207ENST00000421461 MKRN4PQ13434 485 aaPredicted RBP10.01□□□□□ -0.81
NEB-207ENST00000421461 PCDH10Q9P2E7 1040 aa10.01□□□□□ -0.81
NEB-207ENST00000421461 FARP1Q9Y4F1 1045 aaPredicted RBP10.01□□□□□ -0.81
NEB-207ENST00000421461 EHMT2Q96KQ7 1210 aa10□□□□□ -0.81
NEB-207ENST00000421461 POTEMA6NI47 508 aa9.97□□□□□ -0.81
NEB-207ENST00000421461 OTUD5Q96G74 571 aa9.96□□□□□ -0.82
NEB-207ENST00000421461 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
NEB-207ENST00000421461 ZNF579Q8NAF0 562 aaKnown RBP9.95□□□□□ -0.82
NEB-207ENST00000421461 POTEGQ6S5H5 508 aa9.91□□□□□ -0.82
NEB-207ENST00000421461 ZBTB22O15209 634 aa9.87□□□□□ -0.83
NEB-207ENST00000421461 CSRNP3Q8WYN3 585 aa9.87□□□□□ -0.83
NEB-207ENST00000421461 ZRANB1Q9UGI0 708 aa9.85□□□□□ -0.83
NEB-207ENST00000421461 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
NEB-207ENST00000421461 GALR2O43603 387 aaPredicted RBP9.78□□□□□ -0.84
NEB-207ENST00000421461 MAMSTRQ6ZN01 415 aa9.73□□□□□ -0.85
NEB-207ENST00000421461 PAK3O75914 559 aaPredicted RBP9.71□□□□□ -0.86
NEB-207ENST00000421461 CREBZFQ9NS37 354 aa9.68□□□□□ -0.86
NEB-207ENST00000421461 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
NEB-207ENST00000421461 C7P10643 843 aa9.66□□□□□ -0.86
NEB-207ENST00000421461 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.86
NEB-207ENST00000421461 SLC39A7Q92504 469 aa9.65□□□□□ -0.86
NEB-207ENST00000421461 ASTLQ6HA08 431 aaPredicted RBP9.63□□□□□ -0.87
NEB-207ENST00000421461 METRNQ9UJH8 293 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms