RNA–Protein interactions for RNA: ENST00000409545.2

C2orf88-203, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 3

Gene C2orf88, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-203ENST00000409545 AEBP2Q6ZN18 517 aaPredicted RBP29.17■■■□□ 2.26
C2orf88-203ENST00000409545 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
C2orf88-203ENST00000409545 PHF23Q9BUL5 403 aaPredicted RBP24.86■■□□□ 1.57
C2orf88-203ENST00000409545 SENP3Q9H4L4 574 aaPredicted RBP24.74■■□□□ 1.55
C2orf88-203ENST00000409545 FOXD1Q16676 465 aa23.02■■□□□ 1.28
C2orf88-203ENST00000409545 PLPPR3Q6T4P5 718 aa22.85■■□□□ 1.25
C2orf88-203ENST00000409545 PPP6R1Q9UPN7 881 aa22.02■■□□□ 1.12
C2orf88-203ENST00000409545 ADRA2BP18089 450 aa21.99■■□□□ 1.11
C2orf88-203ENST00000409545 PIAS4Q8N2W9 510 aaPredicted RBP21.66■■□□□ 1.06
C2orf88-203ENST00000409545 MSH5O43196 834 aa21.28■■□□□ 1
C2orf88-203ENST00000409545 PPP4R3CPQ6ZMV5 832 aa20.13■□□□□ 0.81
C2orf88-203ENST00000409545 SCAF1Q9H7N4 1312 aaKnown RBP20.08■□□□□ 0.81
C2orf88-203ENST00000409545 MAPK8IP2Q13387 824 aaPredicted RBP20.03■□□□□ 0.8
C2orf88-203ENST00000409545 POTEDQ86YR6 584 aa19.77■□□□□ 0.76
C2orf88-203ENST00000409545 DMRT2Q9Y5R5 561 aa19.71■□□□□ 0.75
C2orf88-203ENST00000409545 CNKSR2Q8WXI2 1034 aa19.59■□□□□ 0.73
C2orf88-203ENST00000409545 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
C2orf88-203ENST00000409545 KCNA4P22459 653 aa19.44■□□□□ 0.7
C2orf88-203ENST00000409545 NPM3O75607 178 aaKnown RBP19.26■□□□□ 0.67
C2orf88-203ENST00000409545 RNF216Q9NWF9 866 aaPredicted RBP19.26■□□□□ 0.67
C2orf88-203ENST00000409545 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
C2orf88-203ENST00000409545 DCAF8L1A6NGE4 600 aa18.95■□□□□ 0.62
C2orf88-203ENST00000409545 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
C2orf88-203ENST00000409545 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
C2orf88-203ENST00000409545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.53
C2orf88-203ENST00000409545 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
C2orf88-203ENST00000409545 RNF39Q9H2S5 420 aa18.22■□□□□ 0.51
C2orf88-203ENST00000409545 U3KPZ7 1027 aaPredicted RBP18.03■□□□□ 0.48
C2orf88-203ENST00000409545 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
C2orf88-203ENST00000409545 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
C2orf88-203ENST00000409545 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
C2orf88-203ENST00000409545 ZBTB22O15209 634 aa17.88■□□□□ 0.45
C2orf88-203ENST00000409545 MYCNP04198 464 aaPredicted RBP17.77■□□□□ 0.44
C2orf88-203ENST00000409545 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
C2orf88-203ENST00000409545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.69■□□□□ 0.42
C2orf88-203ENST00000409545 HNRNPUL2Q1KMD3 747 aaKnown RBP17.69■□□□□ 0.42
C2orf88-203ENST00000409545 SAMD1Q6SPF0 538 aaPredicted RBP17.62■□□□□ 0.41
C2orf88-203ENST00000409545 CSRNP3Q8WYN3 585 aa17.61■□□□□ 0.41
C2orf88-203ENST00000409545 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
C2orf88-203ENST00000409545 CAPN15O75808 1086 aa17.56■□□□□ 0.4
C2orf88-203ENST00000409545 APLP2Q06481 763 aa17.55■□□□□ 0.4
C2orf88-203ENST00000409545 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
C2orf88-203ENST00000409545 ZNF219Q9P2Y4 722 aaPredicted RBP17.37■□□□□ 0.37
C2orf88-203ENST00000409545 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
C2orf88-203ENST00000409545 ATXN8OSP0DMR3 200 aa17.29■□□□□ 0.36
C2orf88-203ENST00000409545 DSG3P32926 999 aa17.28■□□□□ 0.36
C2orf88-203ENST00000409545 ABCB7O75027 752 aa17.22■□□□□ 0.35
C2orf88-203ENST00000409545 POLA2Q14181 598 aa17.09■□□□□ 0.33
C2orf88-203ENST00000409545 ZBTB12Q9Y330 459 aaPredicted RBP16.72■□□□□ 0.27
C2orf88-203ENST00000409545 FBLN2P98095 1184 aa16.61■□□□□ 0.25
C2orf88-203ENST00000409545 MKRN4PQ13434 485 aaPredicted RBP16.58■□□□□ 0.24
C2orf88-203ENST00000409545 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
C2orf88-203ENST00000409545 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
C2orf88-203ENST00000409545 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
C2orf88-203ENST00000409545 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
C2orf88-203ENST00000409545 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
C2orf88-203ENST00000409545 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
C2orf88-203ENST00000409545 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
C2orf88-203ENST00000409545 SSUH2Q9Y2M2 353 aa16.13■□□□□ 0.17
C2orf88-203ENST00000409545 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
C2orf88-203ENST00000409545 REM2Q8IYK8 340 aaPredicted RBP16.08■□□□□ 0.16
C2orf88-203ENST00000409545 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
C2orf88-203ENST00000409545 FKBP8Q14318 412 aa15.95■□□□□ 0.14
C2orf88-203ENST00000409545 PITPNM1O00562 1244 aa15.89■□□□□ 0.13
C2orf88-203ENST00000409545 CHRDL2Q6WN34 429 aa15.86■□□□□ 0.13
C2orf88-203ENST00000409545 SPDYE1Q8NFV5 336 aaPredicted RBP15.86■□□□□ 0.13
C2orf88-203ENST00000409545 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
C2orf88-203ENST00000409545 PROM2Q8N271 834 aa15.76■□□□□ 0.11
C2orf88-203ENST00000409545 PRR29P0C7W0 189 aa15.66■□□□□ 0.1
C2orf88-203ENST00000409545 STAG3Q9UJ98 1225 aa15.66■□□□□ 0.1
C2orf88-203ENST00000409545 FXR2P51116 673 aaKnown RBP eCLIP15.63■□□□□ 0.09
C2orf88-203ENST00000409545 PIP4P2Q8N4L2 257 aa15.63■□□□□ 0.09
C2orf88-203ENST00000409545 POTEHQ6S545 545 aa15.61■□□□□ 0.09
C2orf88-203ENST00000409545 PRKAR2AP13861 404 aaKnown RBP15.5■□□□□ 0.07
C2orf88-203ENST00000409545 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
C2orf88-203ENST00000409545 CREBZFQ9NS37 354 aa15.4■□□□□ 0.06
C2orf88-203ENST00000409545 FBXO3Q9UK99 471 aa15.4■□□□□ 0.06
C2orf88-203ENST00000409545 MIER1Q8N108 512 aa15.32■□□□□ 0.04
C2orf88-203ENST00000409545 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
C2orf88-203ENST00000409545 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.04
C2orf88-203ENST00000409545 HAX1O00165 279 aa15.22■□□□□ 0.03
C2orf88-203ENST00000409545 PLEKHG5O94827 1062 aa15.22■□□□□ 0.03
C2orf88-203ENST00000409545 MNX1P50219 401 aaPredicted RBP15.2■□□□□ 0.02
C2orf88-203ENST00000409545 VASPP50552 380 aaPredicted RBP15.2■□□□□ 0.02
C2orf88-203ENST00000409545 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
C2orf88-203ENST00000409545 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
C2orf88-203ENST00000409545 EVX2Q03828 476 aa15.08■□□□□ 0
C2orf88-203ENST00000409545 ZBTB47Q9UFB7 747 aaPredicted RBP15.06■□□□□ 0
C2orf88-203ENST00000409545 CD44P16070 742 aaKnown RBP15.04■□□□□ -0
C2orf88-203ENST00000409545 KLHL34Q8N239 644 aa15.04■□□□□ -0
C2orf88-203ENST00000409545 IFNLR1Q8IU57 520 aaPredicted RBP15□□□□□ -0.01
C2orf88-203ENST00000409545 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
C2orf88-203ENST00000409545 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
C2orf88-203ENST00000409545 NUBP1P53384 320 aa14.92□□□□□ -0.02
C2orf88-203ENST00000409545 RASEFQ8IZ41 740 aa14.92□□□□□ -0.02
C2orf88-203ENST00000409545 SP7Q8TDD2 431 aaPredicted RBP14.91□□□□□ -0.02
C2orf88-203ENST00000409545 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
C2orf88-203ENST00000409545 SPOCK2Q92563 424 aa14.84□□□□□ -0.03
C2orf88-203ENST00000409545 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
C2orf88-203ENST00000409545 DCAF8Q5TAQ9 597 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms