RNA–Protein interactions for RNA: ENST00000398671.2

RC3H2-204, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5

Gene RC3H2, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-204ENST00000398671 AEBP2Q6ZN18 517 aaPredicted RBP30.2■■■□□ 2.43
RC3H2-204ENST00000398671 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
RC3H2-204ENST00000398671 SENP3Q9H4L4 574 aaPredicted RBP25.85■■□□□ 1.73
RC3H2-204ENST00000398671 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
RC3H2-204ENST00000398671 FOXD1Q16676 465 aa24.19■■□□□ 1.46
RC3H2-204ENST00000398671 POTEDQ86YR6 584 aa23.73■■□□□ 1.39
RC3H2-204ENST00000398671 MSH5O43196 834 aa22.93■■□□□ 1.26
RC3H2-204ENST00000398671 PIAS4Q8N2W9 510 aaPredicted RBP22.41■■□□□ 1.18
RC3H2-204ENST00000398671 PPP6R1Q9UPN7 881 aa22.01■■□□□ 1.11
RC3H2-204ENST00000398671 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
RC3H2-204ENST00000398671 ADRA2BP18089 450 aa21.88■■□□□ 1.09
RC3H2-204ENST00000398671 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
RC3H2-204ENST00000398671 MAPK8IP2Q13387 824 aaPredicted RBP20.32■□□□□ 0.84
RC3H2-204ENST00000398671 CACNB1Q02641 598 aaPredicted RBP20.11■□□□□ 0.81
RC3H2-204ENST00000398671 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
RC3H2-204ENST00000398671 DCAF8L1A6NGE4 600 aa19.51■□□□□ 0.71
RC3H2-204ENST00000398671 RNF39Q9H2S5 420 aa19.51■□□□□ 0.71
RC3H2-204ENST00000398671 HOXD11P31277 338 aaPredicted RBP19.33■□□□□ 0.68
RC3H2-204ENST00000398671 C1QBPQ07021 282 aaKnown RBP19.15■□□□□ 0.66
RC3H2-204ENST00000398671 PPP4R3CPQ6ZMV5 832 aa19.09■□□□□ 0.65
RC3H2-204ENST00000398671 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
RC3H2-204ENST00000398671 CNKSR2Q8WXI2 1034 aa18.92■□□□□ 0.62
RC3H2-204ENST00000398671 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
RC3H2-204ENST00000398671 POTEHQ6S545 545 aa18.43■□□□□ 0.54
RC3H2-204ENST00000398671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.531e-6■■□□□ 11.9
RC3H2-204ENST00000398671 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
RC3H2-204ENST00000398671 DSG3P32926 999 aa18■□□□□ 0.47
RC3H2-204ENST00000398671 U3KPZ7 1027 aaPredicted RBP17.96■□□□□ 0.47
RC3H2-204ENST00000398671 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
RC3H2-204ENST00000398671 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
RC3H2-204ENST00000398671 CAPN15O75808 1086 aa17.87■□□□□ 0.45
RC3H2-204ENST00000398671 ABCB7O75027 752 aa17.42■□□□□ 0.38
RC3H2-204ENST00000398671 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
RC3H2-204ENST00000398671 ZNF219Q9P2Y4 722 aaPredicted RBP17.37■□□□□ 0.37
RC3H2-204ENST00000398671 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
RC3H2-204ENST00000398671 APLP2Q06481 763 aa17.29■□□□□ 0.36
RC3H2-204ENST00000398671 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
RC3H2-204ENST00000398671 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
RC3H2-204ENST00000398671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
RC3H2-204ENST00000398671 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
RC3H2-204ENST00000398671 SAMD1Q6SPF0 538 aaPredicted RBP16.99■□□□□ 0.31
RC3H2-204ENST00000398671 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
RC3H2-204ENST00000398671 KCNA4P22459 653 aa16.85■□□□□ 0.29
RC3H2-204ENST00000398671 POLA2Q14181 598 aa16.74■□□□□ 0.27
RC3H2-204ENST00000398671 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
RC3H2-204ENST00000398671 MYCNP04198 464 aaPredicted RBP16.56■□□□□ 0.24
RC3H2-204ENST00000398671 PIP4P2Q8N4L2 257 aa16.55■□□□□ 0.24
RC3H2-204ENST00000398671 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
RC3H2-204ENST00000398671 HAX1O00165 279 aa16.39■□□□□ 0.21
RC3H2-204ENST00000398671 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
RC3H2-204ENST00000398671 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
RC3H2-204ENST00000398671 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.2
RC3H2-204ENST00000398671 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
RC3H2-204ENST00000398671 ATF5Q9Y2D1 282 aaPredicted RBP16.25■□□□□ 0.19
RC3H2-204ENST00000398671 EVX2Q03828 476 aa16.2■□□□□ 0.18
RC3H2-204ENST00000398671 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
RC3H2-204ENST00000398671 PRKAR2AP13861 404 aaKnown RBP15.86■□□□□ 0.13
RC3H2-204ENST00000398671 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
RC3H2-204ENST00000398671 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
RC3H2-204ENST00000398671 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
RC3H2-204ENST00000398671 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
RC3H2-204ENST00000398671 LHX8Q68G74 356 aa15.82■□□□□ 0.12
RC3H2-204ENST00000398671 GABBR2O75899 941 aa15.76■□□□□ 0.11
RC3H2-204ENST00000398671 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
RC3H2-204ENST00000398671 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
RC3H2-204ENST00000398671 CLEC11AQ9Y240 323 aa15.68■□□□□ 0.1
RC3H2-204ENST00000398671 FBLN2P98095 1184 aa15.61■□□□□ 0.09
RC3H2-204ENST00000398671 SSUH2Q9Y2M2 353 aa15.56■□□□□ 0.08
RC3H2-204ENST00000398671 ZBTB22O15209 634 aa15.53■□□□□ 0.08
RC3H2-204ENST00000398671 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
RC3H2-204ENST00000398671 CHADLQ6NUI6 762 aa15.52■□□□□ 0.08
RC3H2-204ENST00000398671 MKRN4PQ13434 485 aaPredicted RBP15.48■□□□□ 0.07
RC3H2-204ENST00000398671 POTEIP0CG38 1075 aa15.47■□□□□ 0.07
RC3H2-204ENST00000398671 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
RC3H2-204ENST00000398671 PLSCR2Q9NRY7 297 aa15.43■□□□□ 0.06
RC3H2-204ENST00000398671 CD44P16070 742 aaKnown RBP15.32■□□□□ 0.04
RC3H2-204ENST00000398671 PRR29P0C7W0 189 aa15.31■□□□□ 0.04
RC3H2-204ENST00000398671 CLCN6P51797 869 aa15.22■□□□□ 0.03
RC3H2-204ENST00000398671 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
RC3H2-204ENST00000398671 FARP1Q9Y4F1 1045 aaPredicted RBP15.2■□□□□ 0.02
RC3H2-204ENST00000398671 DCBLD2Q96PD2 775 aa15.14■□□□□ 0.01
RC3H2-204ENST00000398671 ZNF579Q8NAF0 562 aaKnown RBP15.09■□□□□ 0.01
RC3H2-204ENST00000398671 OTUD5Q96G74 571 aa15.03■□□□□ -0
RC3H2-204ENST00000398671 POTEMA6NI47 508 aa14.95□□□□□ -0.02
RC3H2-204ENST00000398671 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
RC3H2-204ENST00000398671 POTEB2H3BUK9 544 aa14.94□□□□□ -0.02
RC3H2-204ENST00000398671 GALR2O43603 387 aaPredicted RBP14.94□□□□□ -0.02
RC3H2-204ENST00000398671 POTEGQ6S5H5 508 aa14.88□□□□□ -0.03
RC3H2-204ENST00000398671 CREBZFQ9NS37 354 aa14.82□□□□□ -0.04
RC3H2-204ENST00000398671 PHF12Q96QT6 1004 aa14.73□□□□□ -0.05
RC3H2-204ENST00000398671 PELP1Q8IZL8 1130 aaKnown RBP14.72□□□□□ -0.05
RC3H2-204ENST00000398671 PCDH10Q9P2E7 1040 aa14.71□□□□□ -0.05
RC3H2-204ENST00000398671 PAK3O75914 559 aaPredicted RBP14.64□□□□□ -0.07
RC3H2-204ENST00000398671 POTEJP0CG39 1038 aa14.61□□□□□ -0.07
RC3H2-204ENST00000398671 LCE2DQ5TA82 110 aaPredicted RBP14.61□□□□□ -0.07
RC3H2-204ENST00000398671 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
RC3H2-204ENST00000398671 METRNQ9UJH8 293 aa14.61□□□□□ -0.07
RC3H2-204ENST00000398671 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.08
RC3H2-204ENST00000398671 SLC39A7Q92504 469 aa14.53□□□□□ -0.08
RC3H2-204ENST00000398671 ATMINO43313 823 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms