RNA–Protein interactions for RNA: ENST00000358546.3

RAB21-202, Transcript of RAB21, member RAS oncogene family, humanhuman

TSL 2

Gene RAB21, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB21-202ENST00000358546 AEBP2Q6ZN18 517 aaPredicted RBP27.46■■□□□ 1.99
RAB21-202ENST00000358546 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
RAB21-202ENST00000358546 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
RAB21-202ENST00000358546 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
RAB21-202ENST00000358546 FOXD1Q16676 465 aa21.69■■□□□ 1.06
RAB21-202ENST00000358546 PLPPR3Q6T4P5 718 aa21.49■■□□□ 1.03
RAB21-202ENST00000358546 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
RAB21-202ENST00000358546 ADRA2BP18089 450 aa20.63■□□□□ 0.89
RAB21-202ENST00000358546 PIAS4Q8N2W9 510 aaPredicted RBP20.37■□□□□ 0.85
RAB21-202ENST00000358546 MSH5O43196 834 aa20.1■□□□□ 0.81
RAB21-202ENST00000358546 PPP4R3CPQ6ZMV5 832 aa18.9■□□□□ 0.62
RAB21-202ENST00000358546 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
RAB21-202ENST00000358546 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
RAB21-202ENST00000358546 MAPK8IP2Q13387 824 aaPredicted RBP18.78■□□□□ 0.6
RAB21-202ENST00000358546 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
RAB21-202ENST00000358546 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
RAB21-202ENST00000358546 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
RAB21-202ENST00000358546 KCNA4P22459 653 aa18.19■□□□□ 0.5
RAB21-202ENST00000358546 HOXD11P31277 338 aaPredicted RBP18.14■□□□□ 0.49
RAB21-202ENST00000358546 RNF216Q9NWF9 866 aaPredicted RBP18.14■□□□□ 0.49
RAB21-202ENST00000358546 NPM3O75607 178 aaKnown RBP18.07■□□□□ 0.48
RAB21-202ENST00000358546 DCAF8L1A6NGE4 600 aa17.73■□□□□ 0.43
RAB21-202ENST00000358546 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
RAB21-202ENST00000358546 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.36
RAB21-202ENST00000358546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
RAB21-202ENST00000358546 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
RAB21-202ENST00000358546 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
RAB21-202ENST00000358546 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
RAB21-202ENST00000358546 U3KPZ7 1027 aaPredicted RBP16.96■□□□□ 0.31
RAB21-202ENST00000358546 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
RAB21-202ENST00000358546 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
RAB21-202ENST00000358546 ZBTB22O15209 634 aa16.75■□□□□ 0.27
RAB21-202ENST00000358546 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.27
RAB21-202ENST00000358546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
RAB21-202ENST00000358546 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
RAB21-202ENST00000358546 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
RAB21-202ENST00000358546 APLP2Q06481 763 aa16.55■□□□□ 0.24
RAB21-202ENST00000358546 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
RAB21-202ENST00000358546 EHMT2Q96KQ7 1210 aa16.48■□□□□ 0.23
RAB21-202ENST00000358546 CAPN15O75808 1086 aa16.46■□□□□ 0.23
RAB21-202ENST00000358546 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
RAB21-202ENST00000358546 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
RAB21-202ENST00000358546 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
RAB21-202ENST00000358546 ATXN8OSP0DMR3 200 aa16.28■□□□□ 0.2
RAB21-202ENST00000358546 DSG3P32926 999 aa16.28■□□□□ 0.2
RAB21-202ENST00000358546 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
RAB21-202ENST00000358546 ABCB7O75027 752 aa16.12■□□□□ 0.17
RAB21-202ENST00000358546 POLA2Q14181 598 aa16.02■□□□□ 0.16
RAB21-202ENST00000358546 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
RAB21-202ENST00000358546 FBLN2P98095 1184 aa15.59■□□□□ 0.09
RAB21-202ENST00000358546 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
RAB21-202ENST00000358546 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
RAB21-202ENST00000358546 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
RAB21-202ENST00000358546 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
RAB21-202ENST00000358546 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
RAB21-202ENST00000358546 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
RAB21-202ENST00000358546 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
RAB21-202ENST00000358546 SSUH2Q9Y2M2 353 aa15.21■□□□□ 0.03
RAB21-202ENST00000358546 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
RAB21-202ENST00000358546 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
RAB21-202ENST00000358546 SPDYE4A6NLX3 237 aa15.08■□□□□ 0
RAB21-202ENST00000358546 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
RAB21-202ENST00000358546 CHRDL2Q6WN34 429 aa14.96□□□□□ -0.01
RAB21-202ENST00000358546 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
RAB21-202ENST00000358546 SPDYE1Q8NFV5 336 aaPredicted RBP14.92□□□□□ -0.02
RAB21-202ENST00000358546 FKBP8Q14318 412 aa14.86□□□□□ -0.03
RAB21-202ENST00000358546 PROM2Q8N271 834 aa14.86□□□□□ -0.03
RAB21-202ENST00000358546 CLEC11AQ9Y240 323 aa14.82□□□□□ -0.04
RAB21-202ENST00000358546 POTEHQ6S545 545 aa14.75□□□□□ -0.05
RAB21-202ENST00000358546 FXR2P51116 673 aaKnown RBP eCLIP14.74□□□□□ -0.05
RAB21-202ENST00000358546 PIP4P2Q8N4L2 257 aa14.72□□□□□ -0.05
RAB21-202ENST00000358546 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
RAB21-202ENST00000358546 PRR29P0C7W0 189 aa14.68□□□□□ -0.06
RAB21-202ENST00000358546 PRKAR2AP13861 404 aaKnown RBP14.56□□□□□ -0.08
RAB21-202ENST00000358546 CHADLQ6NUI6 762 aa14.5□□□□□ -0.09
RAB21-202ENST00000358546 CREBZFQ9NS37 354 aa14.47□□□□□ -0.09
RAB21-202ENST00000358546 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
RAB21-202ENST00000358546 FARP1Q9Y4F1 1045 aaPredicted RBP14.37□□□□□ -0.11
RAB21-202ENST00000358546 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
RAB21-202ENST00000358546 MIER1Q8N108 512 aa14.3□□□□□ -0.12
RAB21-202ENST00000358546 HAX1O00165 279 aa14.28□□□□□ -0.12
RAB21-202ENST00000358546 PLCD3Q8N3E9 789 aa14.26□□□□□ -0.13
RAB21-202ENST00000358546 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
RAB21-202ENST00000358546 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
RAB21-202ENST00000358546 VASPP50552 380 aaPredicted RBP14.24□□□□□ -0.13
RAB21-202ENST00000358546 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
RAB21-202ENST00000358546 EVX2Q03828 476 aa14.16□□□□□ -0.14
RAB21-202ENST00000358546 CD44P16070 742 aaKnown RBP14.14□□□□□ -0.15
RAB21-202ENST00000358546 ZBTB47Q9UFB7 747 aaPredicted RBP14.14□□□□□ -0.15
RAB21-202ENST00000358546 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
RAB21-202ENST00000358546 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
RAB21-202ENST00000358546 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
RAB21-202ENST00000358546 NUBP1P53384 320 aa14.01□□□□□ -0.17
RAB21-202ENST00000358546 ZRANB1Q9UGI0 708 aa14.01□□□□□ -0.17
RAB21-202ENST00000358546 KLHL34Q8N239 644 aa14□□□□□ -0.17
RAB21-202ENST00000358546 RASEFQ8IZ41 740 aa13.99□□□□□ -0.17
RAB21-202ENST00000358546 ZNF579Q8NAF0 562 aaKnown RBP13.98□□□□□ -0.17
RAB21-202ENST00000358546 TSPYL2Q9H2G4 693 aaPredicted RBP13.93□□□□□ -0.18
RAB21-202ENST00000358546 SLC24A1O60721 1099 aa13.9□□□□□ -0.18
RAB21-202ENST00000358546 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms