RNA–Protein interactions for RNA: ENSMUST00000047677.8

Ccdc18-201, Transcript of Coiled-coil domain-containing protein 18, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc18, Length 5,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc18-201ENSMUST00000047677 Gm35339A0A140LHH9 1649 aa10.39□□□□□ -0.75
Ccdc18-201ENSMUST00000047677 ScribQ80U72 1612 aa9.22□□□□□ -0.93
Ccdc18-201ENSMUST00000047677 Abcc9P70170 1546 aa9.11□□□□□ -0.95
Ccdc18-201ENSMUST00000047677 Abcc8B2RUS7 1588 aa9.03□□□□□ -0.96
Ccdc18-201ENSMUST00000047677 NischQ80TM9 1593 aa8.91□□□□□ -0.98
Ccdc18-201ENSMUST00000047677 Dcaf1Q80TR8 1506 aa8.69□□□□□ -1.02
Ccdc18-201ENSMUST00000047677 Ccdc180J3QNE4 1664 aa8.69□□□□□ -1.02
Ccdc18-201ENSMUST00000047677 BicraF8VPZ9 1578 aa8.47□□□□□ -1.05
Ccdc18-201ENSMUST00000047677 Kdm5dQ62240 1548 aa8.28□□□□□ -1.08
Ccdc18-201ENSMUST00000047677 Unc13aQ4KUS2 1712 aa8.26□□□□□ -1.09
Ccdc18-201ENSMUST00000047677 Sycp2Q9CUU3 1500 aa8.08□□□□□ -1.12
Ccdc18-201ENSMUST00000047677 Thoc2B1AZI6 1594 aaKnown RBP8.06□□□□□ -1.12
Ccdc18-201ENSMUST00000047677 Crybg2B7ZCC2 1516 aa8□□□□□ -1.13
Ccdc18-201ENSMUST00000047677 NacadQ5SWP3 1504 aa7.96□□□□□ -1.13
Ccdc18-201ENSMUST00000047677 Smarca2Q6DIC0 1577 aa7.87□□□□□ -1.15
Ccdc18-201ENSMUST00000047677 Gpatch8A2A6A1 1505 aa7.85□□□□□ -1.15
Ccdc18-201ENSMUST00000047677 Setd1bQ8CFT2 1985 aa7.77□□□□□ -1.17
Ccdc18-201ENSMUST00000047677 Baz1aO88379 1555 aa7.76□□□□□ -1.17
Ccdc18-201ENSMUST00000047677 Rb1cc1Q9ESK9 1588 aa7.75□□□□□ -1.17
Ccdc18-201ENSMUST00000047677 Rtl1Q7M732 1744 aa7.67□□□□□ -1.18
Ccdc18-201ENSMUST00000047677 Zcchc6Q5BLK4 1491 aaKnown RBP7.62□□□□□ -1.19
Ccdc18-201ENSMUST00000047677 Fam135aQ6NS59 1506 aa7.62□□□□□ -1.19
Ccdc18-201ENSMUST00000047677 TnnQ80Z71 1560 aa7.59□□□□□ -1.19
Ccdc18-201ENSMUST00000047677 Top2bQ64511 1612 aa7.55□□□□□ -1.2
Ccdc18-201ENSMUST00000047677 Wdr62Q3U3T8 1523 aa7.52□□□□□ -1.21
Ccdc18-201ENSMUST00000047677 Cecr2E9Q2Z1 1453 aa7.47□□□□□ -1.21
Ccdc18-201ENSMUST00000047677 Smarca4Q3TKT4 1613 aaKnown RBP7.45□□□□□ -1.22
Ccdc18-201ENSMUST00000047677 Eif4g1Q6NZJ6 1600 aaKnown RBP7.44□□□□□ -1.22
Ccdc18-201ENSMUST00000047677 Zcchc11B2RX14 1644 aaKnown RBP7.41□□□□□ -1.22
Ccdc18-201ENSMUST00000047677 Iqgap2Q3UQ44 1575 aa7.39□□□□□ -1.23
Ccdc18-201ENSMUST00000047677 Cttnbp2B9EJA2 1648 aa7.38□□□□□ -1.23
Ccdc18-201ENSMUST00000047677 Frmpd1A2AKB4 1549 aa7.36□□□□□ -1.23
Ccdc18-201ENSMUST00000047677 Cc2d2aQ8CFW7 1633 aa7.34□□□□□ -1.23
Ccdc18-201ENSMUST00000047677 Synj1Q8CHC4 1574 aa7.34□□□□□ -1.23
Ccdc18-201ENSMUST00000047677 Baz1bQ9Z277 1479 aa7.32□□□□□ -1.24
Ccdc18-201ENSMUST00000047677 Lamc3Q9R0B6 1581 aa7.26□□□□□ -1.25
Ccdc18-201ENSMUST00000047677 Atad2bE9Q166 1460 aaKnown RBP7.23□□□□□ -1.25
Ccdc18-201ENSMUST00000047677 Dnajc5bQ9CQ94 199 aa7.22□□□□□ -1.25
Ccdc18-201ENSMUST00000047677 Lrriq1Q0P5X1 1673 aa7.17□□□□□ -1.26
Ccdc18-201ENSMUST00000047677 Kif21aQ9QXL2 1672 aa7.16□□□□□ -1.26
Ccdc18-201ENSMUST00000047677 CftrP26361 1476 aa7.16□□□□□ -1.26
Ccdc18-201ENSMUST00000047677 Cul7Q8VE73 1689 aa7.07□□□□□ -1.28
Ccdc18-201ENSMUST00000047677 Prdm2A2A7B5 1709 aaKnown RBP7.05□□□□□ -1.28
Ccdc18-201ENSMUST00000047677 Eif4g3Q80XI3 1579 aaKnown RBP7.04□□□□□ -1.28
Ccdc18-201ENSMUST00000047677 Camsap1A2AHC3 1581 aa7.02□□□□□ -1.29
Ccdc18-201ENSMUST00000047677 Pds5bQ4VA53 1446 aaKnown RBP7□□□□□ -1.29
Ccdc18-201ENSMUST00000047677 Cul9Q80TT8 1865 aa6.97□□□□□ -1.29
Ccdc18-201ENSMUST00000047677 Chd1P40201 1711 aa6.97□□□□□ -1.29
Ccdc18-201ENSMUST00000047677 Adamts12Q811B3 1600 aa6.96□□□□□ -1.3
Ccdc18-201ENSMUST00000047677 Samd9lQ69Z37 1561 aa6.93□□□□□ -1.3
Ccdc18-201ENSMUST00000047677 Pdcd11Q6NS46 1862 aaKnown RBP6.93□□□□□ -1.3
Ccdc18-201ENSMUST00000047677 Pbrm1Q8BSQ9 1634 aaKnown RBP6.93□□□□□ -1.3
Ccdc18-201ENSMUST00000047677 Abca16E9PWJ7 1678 aa6.92□□□□□ -1.3
Ccdc18-201ENSMUST00000047677 Top2aQ01320 1528 aaKnown RBP6.9□□□□□ -1.3
Ccdc18-201ENSMUST00000047677 Abcc2Q8VI47 1543 aa6.89□□□□□ -1.31
Ccdc18-201ENSMUST00000047677 BC005561E9Q5E2 1589 aa6.88□□□□□ -1.31
Ccdc18-201ENSMUST00000047677 Lmo7E9PYF4 1699 aaKnown RBP6.87□□□□□ -1.31
Ccdc18-201ENSMUST00000047677 Abca5Q8K448 1642 aa6.87□□□□□ -1.31
Ccdc18-201ENSMUST00000047677 Dnmt1P13864 1620 aaKnown RBP6.87□□□□□ -1.31
Ccdc18-201ENSMUST00000047677 Erich3F6QRE9 1637 aa6.85□□□□□ -1.31
Ccdc18-201ENSMUST00000047677 Kiaa0556Q8C753 1610 aa6.85□□□□□ -1.31
Ccdc18-201ENSMUST00000047677 Magi3Q9EQJ9 1476 aa6.84□□□□□ -1.31
Ccdc18-201ENSMUST00000047677 Pprc1Q6NZN1 1644 aa6.82□□□□□ -1.32
Ccdc18-201ENSMUST00000047677 Kdm6bQ5NCY0 1641 aa6.78□□□□□ -1.32
Ccdc18-201ENSMUST00000047677 Urb2E9Q7L1 1524 aaKnown RBP6.75□□□□□ -1.33
Ccdc18-201ENSMUST00000047677 SynmQ70IV5 1561 aa6.75□□□□□ -1.33
Ccdc18-201ENSMUST00000047677 Rusc2Q80U22 1514 aa6.75□□□□□ -1.33
Ccdc18-201ENSMUST00000047677 Shroom2A2ALU4 1481 aa6.75□□□□□ -1.33
Ccdc18-201ENSMUST00000047677 Cdc42bpaQ3UU96 1719 aa6.73□□□□□ -1.33
Ccdc18-201ENSMUST00000047677 Nup160Q9Z0W3 1402 aaKnown RBP6.73□□□□□ -1.33
Ccdc18-201ENSMUST00000047677 Arhgef12Q8R4H2 1543 aaKnown RBP6.72□□□□□ -1.33
Ccdc18-201ENSMUST00000047677 Mrc2Q64449 1479 aa6.72□□□□□ -1.33
Ccdc18-201ENSMUST00000047677 NrkQ9R0G8 1455 aa6.72□□□□□ -1.33
Ccdc18-201ENSMUST00000047677 Map3k4O08648 1597 aa6.72□□□□□ -1.33
Ccdc18-201ENSMUST00000047677 Setbp1Q9Z180 1582 aa6.7□□□□□ -1.34
Ccdc18-201ENSMUST00000047677 Kiaa1210E9Q0C6 1637 aa6.69□□□□□ -1.34
Ccdc18-201ENSMUST00000047677 PtprkP35822 1457 aa6.68□□□□□ -1.34
Ccdc18-201ENSMUST00000047677 Pla2r1Q62028 1487 aa6.68□□□□□ -1.34
Ccdc18-201ENSMUST00000047677 Adamtsl3G3UXC7 1706 aa6.67□□□□□ -1.34
Ccdc18-201ENSMUST00000047677 Grin2bQ01097 1482 aa6.67□□□□□ -1.34
Ccdc18-201ENSMUST00000047677 Mroh2aD3Z750 1679 aa6.67□□□□□ -1.34
Ccdc18-201ENSMUST00000047677 Disp1Q3TDN0 1521 aa6.66□□□□□ -1.34
Ccdc18-201ENSMUST00000047677 Crocc2F6XLV1 1638 aa6.66□□□□□ -1.34
Ccdc18-201ENSMUST00000047677 Shroom4Q1W617 1475 aa6.66□□□□□ -1.34
Ccdc18-201ENSMUST00000047677 Fam208aQ69ZR9 1610 aaKnown RBP6.65□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Gcc2Q8CHG3 1679 aa6.64□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 NhsB1AV60 1647 aa6.64□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Rsf1E9PWW9 1441 aaKnown RBP6.63□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Kif21bQ9QXL1 1668 aa6.63□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Map3k1P53349 1493 aa6.63□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Phldb1Q6PDH0 1371 aaKnown RBP6.63□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Trpm1Q2TV84 1622 aa6.63□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Slx4Q6P1D7 1565 aa6.63□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 EprsQ8CGC7 1512 aaKnown RBP6.63□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Lamc1P02468 1607 aaKnown RBP6.62□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Tmem131lQ3U3D7 1597 aa6.62□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Abca17E9PX95 1733 aa6.62□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Rnf17Q99MV7 1640 aa6.62□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Peg3Q3URU2 1571 aa6.61□□□□□ -1.35
Ccdc18-201ENSMUST00000047677 Col17a1Q07563 1470 aa6.6□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 108.7 ms