RNA–Protein interactions for RNA: ENSMUST00000047677.8

Ccdc18-201, Transcript of Coiled-coil domain-containing protein 18, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc18, Length 5,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc18-201ENSMUST00000047677 Gm35339A0A140LHH9 1649 aa10,39□□□□□ -0,75
Ccdc18-201ENSMUST00000047677 ScribQ80U72 1612 aa9,22□□□□□ -0,93
Ccdc18-201ENSMUST00000047677 Abcc9P70170 1546 aa9,11□□□□□ -0,95
Ccdc18-201ENSMUST00000047677 Abcc8B2RUS7 1588 aa9,03□□□□□ -0,96
Ccdc18-201ENSMUST00000047677 NischQ80TM9 1593 aa8,91□□□□□ -0,98
Ccdc18-201ENSMUST00000047677 Dcaf1Q80TR8 1506 aa8,69□□□□□ -1,02
Ccdc18-201ENSMUST00000047677 Ccdc180J3QNE4 1664 aa8,69□□□□□ -1,02
Ccdc18-201ENSMUST00000047677 BicraF8VPZ9 1578 aa8,47□□□□□ -1,05
Ccdc18-201ENSMUST00000047677 Kdm5dQ62240 1548 aa8,28□□□□□ -1,08
Ccdc18-201ENSMUST00000047677 Unc13aQ4KUS2 1712 aa8,26□□□□□ -1,09
Ccdc18-201ENSMUST00000047677 Sycp2Q9CUU3 1500 aa8,08□□□□□ -1,12
Ccdc18-201ENSMUST00000047677 Thoc2B1AZI6 1594 aaKnown RBP8,06□□□□□ -1,12
Ccdc18-201ENSMUST00000047677 Crybg2B7ZCC2 1516 aa8□□□□□ -1,13
Ccdc18-201ENSMUST00000047677 NacadQ5SWP3 1504 aa7,96□□□□□ -1,13
Ccdc18-201ENSMUST00000047677 Smarca2Q6DIC0 1577 aa7,87□□□□□ -1,15
Ccdc18-201ENSMUST00000047677 Gpatch8A2A6A1 1505 aa7,85□□□□□ -1,15
Ccdc18-201ENSMUST00000047677 Setd1bQ8CFT2 1985 aa7,77□□□□□ -1,17
Ccdc18-201ENSMUST00000047677 Baz1aO88379 1555 aa7,76□□□□□ -1,17
Ccdc18-201ENSMUST00000047677 Rb1cc1Q9ESK9 1588 aa7,75□□□□□ -1,17
Ccdc18-201ENSMUST00000047677 Rtl1Q7M732 1744 aa7,67□□□□□ -1,18
Ccdc18-201ENSMUST00000047677 Zcchc6Q5BLK4 1491 aaKnown RBP7,62□□□□□ -1,19
Ccdc18-201ENSMUST00000047677 Fam135aQ6NS59 1506 aa7,62□□□□□ -1,19
Ccdc18-201ENSMUST00000047677 TnnQ80Z71 1560 aa7,59□□□□□ -1,19
Ccdc18-201ENSMUST00000047677 Top2bQ64511 1612 aa7,55□□□□□ -1,2
Ccdc18-201ENSMUST00000047677 Wdr62Q3U3T8 1523 aa7,52□□□□□ -1,21
Ccdc18-201ENSMUST00000047677 Cecr2E9Q2Z1 1453 aa7,47□□□□□ -1,21
Ccdc18-201ENSMUST00000047677 Smarca4Q3TKT4 1613 aaKnown RBP7,45□□□□□ -1,22
Ccdc18-201ENSMUST00000047677 Eif4g1Q6NZJ6 1600 aaKnown RBP7,44□□□□□ -1,22
Ccdc18-201ENSMUST00000047677 Zcchc11B2RX14 1644 aaKnown RBP7,41□□□□□ -1,22
Ccdc18-201ENSMUST00000047677 Iqgap2Q3UQ44 1575 aa7,39□□□□□ -1,23
Ccdc18-201ENSMUST00000047677 Cttnbp2B9EJA2 1648 aa7,38□□□□□ -1,23
Ccdc18-201ENSMUST00000047677 Frmpd1A2AKB4 1549 aa7,36□□□□□ -1,23
Ccdc18-201ENSMUST00000047677 Cc2d2aQ8CFW7 1633 aa7,34□□□□□ -1,23
Ccdc18-201ENSMUST00000047677 Synj1Q8CHC4 1574 aa7,34□□□□□ -1,23
Ccdc18-201ENSMUST00000047677 Baz1bQ9Z277 1479 aa7,32□□□□□ -1,24
Ccdc18-201ENSMUST00000047677 Lamc3Q9R0B6 1581 aa7,26□□□□□ -1,25
Ccdc18-201ENSMUST00000047677 Atad2bE9Q166 1460 aaKnown RBP7,23□□□□□ -1,25
Ccdc18-201ENSMUST00000047677 Dnajc5bQ9CQ94 199 aa7,22□□□□□ -1,25
Ccdc18-201ENSMUST00000047677 Lrriq1Q0P5X1 1673 aa7,17□□□□□ -1,26
Ccdc18-201ENSMUST00000047677 Kif21aQ9QXL2 1672 aa7,16□□□□□ -1,26
Ccdc18-201ENSMUST00000047677 CftrP26361 1476 aa7,16□□□□□ -1,26
Ccdc18-201ENSMUST00000047677 Cul7Q8VE73 1689 aa7,07□□□□□ -1,28
Ccdc18-201ENSMUST00000047677 Prdm2A2A7B5 1709 aaKnown RBP7,05□□□□□ -1,28
Ccdc18-201ENSMUST00000047677 Eif4g3Q80XI3 1579 aaKnown RBP7,04□□□□□ -1,28
Ccdc18-201ENSMUST00000047677 Camsap1A2AHC3 1581 aa7,02□□□□□ -1,29
Ccdc18-201ENSMUST00000047677 Pds5bQ4VA53 1446 aaKnown RBP7□□□□□ -1,29
Ccdc18-201ENSMUST00000047677 Cul9Q80TT8 1865 aa6,97□□□□□ -1,29
Ccdc18-201ENSMUST00000047677 Chd1P40201 1711 aa6,97□□□□□ -1,29
Ccdc18-201ENSMUST00000047677 Adamts12Q811B3 1600 aa6,96□□□□□ -1,3
Ccdc18-201ENSMUST00000047677 Samd9lQ69Z37 1561 aa6,93□□□□□ -1,3
Ccdc18-201ENSMUST00000047677 Pdcd11Q6NS46 1862 aaKnown RBP6,93□□□□□ -1,3
Ccdc18-201ENSMUST00000047677 Pbrm1Q8BSQ9 1634 aaKnown RBP6,93□□□□□ -1,3
Ccdc18-201ENSMUST00000047677 Abca16E9PWJ7 1678 aa6,92□□□□□ -1,3
Ccdc18-201ENSMUST00000047677 Top2aQ01320 1528 aaKnown RBP6,9□□□□□ -1,3
Ccdc18-201ENSMUST00000047677 Abcc2Q8VI47 1543 aa6,89□□□□□ -1,31
Ccdc18-201ENSMUST00000047677 BC005561E9Q5E2 1589 aa6,88□□□□□ -1,31
Ccdc18-201ENSMUST00000047677 Lmo7E9PYF4 1699 aaKnown RBP6,87□□□□□ -1,31
Ccdc18-201ENSMUST00000047677 Abca5Q8K448 1642 aa6,87□□□□□ -1,31
Ccdc18-201ENSMUST00000047677 Dnmt1P13864 1620 aaKnown RBP6,87□□□□□ -1,31
Ccdc18-201ENSMUST00000047677 Erich3F6QRE9 1637 aa6,85□□□□□ -1,31
Ccdc18-201ENSMUST00000047677 Kiaa0556Q8C753 1610 aa6,85□□□□□ -1,31
Ccdc18-201ENSMUST00000047677 Magi3Q9EQJ9 1476 aa6,84□□□□□ -1,31
Ccdc18-201ENSMUST00000047677 Pprc1Q6NZN1 1644 aa6,82□□□□□ -1,32
Ccdc18-201ENSMUST00000047677 Kdm6bQ5NCY0 1641 aa6,78□□□□□ -1,32
Ccdc18-201ENSMUST00000047677 Urb2E9Q7L1 1524 aaKnown RBP6,75□□□□□ -1,33
Ccdc18-201ENSMUST00000047677 SynmQ70IV5 1561 aa6,75□□□□□ -1,33
Ccdc18-201ENSMUST00000047677 Rusc2Q80U22 1514 aa6,75□□□□□ -1,33
Ccdc18-201ENSMUST00000047677 Shroom2A2ALU4 1481 aa6,75□□□□□ -1,33
Ccdc18-201ENSMUST00000047677 Cdc42bpaQ3UU96 1719 aa6,73□□□□□ -1,33
Ccdc18-201ENSMUST00000047677 Nup160Q9Z0W3 1402 aaKnown RBP6,73□□□□□ -1,33
Ccdc18-201ENSMUST00000047677 Arhgef12Q8R4H2 1543 aaKnown RBP6,72□□□□□ -1,33
Ccdc18-201ENSMUST00000047677 Mrc2Q64449 1479 aa6,72□□□□□ -1,33
Ccdc18-201ENSMUST00000047677 NrkQ9R0G8 1455 aa6,72□□□□□ -1,33
Ccdc18-201ENSMUST00000047677 Map3k4O08648 1597 aa6,72□□□□□ -1,33
Ccdc18-201ENSMUST00000047677 Setbp1Q9Z180 1582 aa6,7□□□□□ -1,34
Ccdc18-201ENSMUST00000047677 Kiaa1210E9Q0C6 1637 aa6,69□□□□□ -1,34
Ccdc18-201ENSMUST00000047677 PtprkP35822 1457 aa6,68□□□□□ -1,34
Ccdc18-201ENSMUST00000047677 Pla2r1Q62028 1487 aa6,68□□□□□ -1,34
Ccdc18-201ENSMUST00000047677 Adamtsl3G3UXC7 1706 aa6,67□□□□□ -1,34
Ccdc18-201ENSMUST00000047677 Grin2bQ01097 1482 aa6,67□□□□□ -1,34
Ccdc18-201ENSMUST00000047677 Mroh2aD3Z750 1679 aa6,67□□□□□ -1,34
Ccdc18-201ENSMUST00000047677 Disp1Q3TDN0 1521 aa6,66□□□□□ -1,34
Ccdc18-201ENSMUST00000047677 Crocc2F6XLV1 1638 aa6,66□□□□□ -1,34
Ccdc18-201ENSMUST00000047677 Shroom4Q1W617 1475 aa6,66□□□□□ -1,34
Ccdc18-201ENSMUST00000047677 Fam208aQ69ZR9 1610 aaKnown RBP6,65□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Gcc2Q8CHG3 1679 aa6,64□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 NhsB1AV60 1647 aa6,64□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Rsf1E9PWW9 1441 aaKnown RBP6,63□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Kif21bQ9QXL1 1668 aa6,63□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Map3k1P53349 1493 aa6,63□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Phldb1Q6PDH0 1371 aaKnown RBP6,63□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Trpm1Q2TV84 1622 aa6,63□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Slx4Q6P1D7 1565 aa6,63□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 EprsQ8CGC7 1512 aaKnown RBP6,63□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Lamc1P02468 1607 aaKnown RBP6,62□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Tmem131lQ3U3D7 1597 aa6,62□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Abca17E9PX95 1733 aa6,62□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Rnf17Q99MV7 1640 aa6,62□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Peg3Q3URU2 1571 aa6,61□□□□□ -1,35
Ccdc18-201ENSMUST00000047677 Col17a1Q07563 1470 aa6,6□□□□□ -1,35
Retrieved 100 of 22,080 RNA–protein pairs in 10,3 ms