RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 VEGFDO43915 354 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 CEACAM4O75871 244 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 LDLRP01130 860 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 MAGEA4P43358 317 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 ITGA1P56199 1179 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 ACY1Q03154 408 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 TMEM115Q12893 351 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-222ENST00000641587 ABRQ12979 859 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 NFE2L1Q14494 772 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 FASTKD3Q14CZ7 662 aaKnown RBP9.74□□□□□ -0.85
PHGDH-222ENST00000641587 NR6A1Q15406 480 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 CCDC38Q502W7 563 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 PDPK2PQ6A1A2 396 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 DENND5AQ6IQ26 1287 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 RANBP10Q6VN20 620 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 ZNF517Q6ZMY9 492 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-222ENST00000641587 PALM2Q8IXS6 379 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 RBM12BQ8IXT5 1001 aaKnown RBP9.74□□□□□ -0.85
PHGDH-222ENST00000641587 MPP5Q8N3R9 675 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 ENDOVQ8N8Q3 282 aaKnown RBP9.74□□□□□ -0.85
PHGDH-222ENST00000641587 FBXO36Q8NEA4 188 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 GDAP1Q8TB36 358 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 CAVIN3Q969G5 261 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 ZNF501Q96CX3 271 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-222ENST00000641587 TTC25Q96NG3 672 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 PHACTR1Q9C0D0 580 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 IL22Q9GZX6 179 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 CDC42EP4Q9H3Q1 356 aaKnown RBP9.74□□□□□ -0.85
PHGDH-222ENST00000641587 VPS37BQ9H9H4 285 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 MAGEE1Q9HCI5 957 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 SLAMF7Q9NQ25 335 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 ZC3H7BQ9UGR2 993 aaKnown RBP9.74□□□□□ -0.85
PHGDH-222ENST00000641587 ZNF451Q9Y4E5 1061 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 FER1L5A0AVI2 2057 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 LRBAP50851 2863 aa9.74□□□□□ -0.85
PHGDH-222ENST00000641587 CCDC88CQ9P219 2028 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 MDC1Q14676 2089 aaKnown RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 UBA6A0AVT1 1052 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 HEATR9A2RTY3 570 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 OR5K3A6NET4 321 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 OR2AG2A6NM03 316 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 E7ESA3 106 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 MASP2O00187 686 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 UGT1A9O60656 530 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 DPM1O60762 260 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 POP7O75817 140 aaKnown RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 ACSL3O95573 720 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 CAPN1P07384 714 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 H2AFXP16104 143 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 PGAM1P18669 254 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 UGT1A6P19224 532 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 LPOP22079 712 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 UGT1A1P22309 533 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 UGT1A4P22310 534 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 HALP42357 657 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 MAGEA3P43357 314 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 ARL4DP49703 201 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 KPNA2P52292 529 aaKnown RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 ATP1A4Q13733 1029 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 PCID2Q5JVF3 399 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 CYB5D1Q6P9G0 228 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 FAM198BQ6UWH4 519 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 TRMT10CQ7L0Y3 403 aaKnown RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 GLT6D1Q7Z4J2 308 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 D2HGDHQ8N465 521 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 ZBTB2Q8N680 514 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 BEND7Q8N7W2 519 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 RASGEF1AQ8N9B8 481 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 SPDYE1Q8NFV5 336 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 ZNF669Q96BR6 464 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 LRRC39Q96DD0 335 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 SNRNP40Q96DI7 357 aaKnown RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 SIGLEC10Q96LC7 697 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 FCRL4Q96PJ5 515 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 VPS35Q96QK1 796 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 RANBP9Q96S59 729 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 NRTNQ99748 197 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 EBNA1BP2Q99848 306 aaKnown RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 UGT1A7Q9HAW7 530 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 UGT1A10Q9HAW8 530 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 UGT1A8Q9HAW9 530 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 ARNT2Q9HBZ2 717 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 IMP3Q9NV31 184 aaKnown RBP9.73□□□□□ -0.85
PHGDH-222ENST00000641587 NINJ2Q9NZG7 142 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 FAM8A1Q9UBU6 413 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 SNX7Q9UNH6 387 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 SEC16AO15027 2179 aa9.73□□□□□ -0.85
PHGDH-222ENST00000641587 WIPF3A6NGB9 483 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 MEN1O00255 615 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 BUD23O43709 281 aaKnown RBP9.72□□□□□ -0.85
PHGDH-222ENST00000641587 DDAH2O95865 285 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 ATXN8OSP0DMR3 200 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 MTHFD1P11586 935 aaKnown RBP9.72□□□□□ -0.85
PHGDH-222ENST00000641587 VCLP18206 1134 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 ADRA1DP25100 572 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 PHBP35232 272 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 RORAP35398 523 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 HSD11B2P80365 405 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 PDE1BQ01064 536 aa9.72□□□□□ -0.85
PHGDH-222ENST00000641587 GTF2H3Q13889 308 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms