RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ARHGEF33A8MVX0 844 aa25.84■■□□□ 1.73
VEGFA-231ENST00000640499 PSIP1O75475 530 aaKnown RBP25.84■■□□□ 1.73
VEGFA-231ENST00000640499 FOLR1P15328 257 aa25.84■■□□□ 1.73
VEGFA-231ENST00000640499 PCBP4P57723 403 aaKnown RBP25.84■■□□□ 1.73
VEGFA-231ENST00000640499 KCNAB1Q14722 419 aa25.84■■□□□ 1.73
VEGFA-231ENST00000640499 ARMC6Q6NXE6 501 aa25.84■■□□□ 1.73
VEGFA-231ENST00000640499 C3orf62Q6ZUJ4 267 aa25.84■■□□□ 1.73
VEGFA-231ENST00000640499 NEK10Q6ZWH5 1172 aa25.84■■□□□ 1.73
VEGFA-231ENST00000640499 ZC3HC1Q86WB0 502 aaKnown RBP25.84■■□□□ 1.73
VEGFA-231ENST00000640499 ZFAND4Q86XD8 727 aa25.84■■□□□ 1.73
VEGFA-231ENST00000640499 GABPB2Q8TAK5 448 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-231ENST00000640499 SKA2Q8WVK7 121 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-231ENST00000640499 DDA1Q9BW61 102 aa25.84■■□□□ 1.73
VEGFA-231ENST00000640499 SPRY4Q9C004 299 aa25.84■■□□□ 1.73
VEGFA-231ENST00000640499 ZFATQ9P243 1243 aa25.84■■□□□ 1.73
VEGFA-231ENST00000640499 PKD1L2Q7Z442 2459 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 DSPP15924 2871 aaKnown RBP25.83■■□□□ 1.73
VEGFA-231ENST00000640499 AHCTF1Q8WYP5 2266 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 SLC9B1P1A6NJY1 282 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 VPS26AO75436 327 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 CD9P21926 228 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 MCM3P25205 808 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 ITPKBP27987 946 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 RAB28P51157 221 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 PRKAA1Q13131 559 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 HECTD2Q5U5R9 776 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 PAQR3Q6TCH7 311 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 STRA8Q7Z7C7 330 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 SLC26A11Q86WA9 606 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 D2HGDHQ8N465 521 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 C2orf73Q8N5S3 287 aaPredicted RBP25.83■■□□□ 1.73
VEGFA-231ENST00000640499 NAF1Q96HR8 494 aaKnown RBP25.83■■□□□ 1.73
VEGFA-231ENST00000640499 DCBLD2Q96PD2 775 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 FAM114A2Q9NRY5 505 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 C1GALT1Q9NS00 363 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 VWA7Q9Y334 891 aa25.83■■□□□ 1.73
VEGFA-231ENST00000640499 SNRNP200O75643 2136 aaKnown RBP25.82■■□□□ 1.72
VEGFA-231ENST00000640499 PIPSLA2A3N6 862 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 FAM159BA6NKW6 160 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 C2orf74A8MZ97 194 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 MATN2O00339 956 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 RASGRF2O14827 1237 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 RPN2P04844 631 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 MPC1LP0DKB6 136 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 PVRP15151 417 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 ST6GAL1P15907 406 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 UGT2B7P16662 529 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 FDXRP22570 491 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 TTLL9Q3SXZ7 439 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 PIWIL4Q7Z3Z4 852 aaKnown RBP25.82■■□□□ 1.72
VEGFA-231ENST00000640499 TRIM73Q86UV7 250 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 ZNF248Q8NDW4 579 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 ASB11Q8WXH4 323 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 L2HGDHQ9H9P8 463 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 TAS2R13Q9NYV9 303 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 SSUH2Q9Y2M2 353 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 CFAP47Q6ZTR5 3102 aa25.82■■□□□ 1.72
VEGFA-231ENST00000640499 GFYI3L273 518 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 PRICKLE3O43900 615 aaPredicted RBP25.81■■□□□ 1.72
VEGFA-231ENST00000640499 TSPAN12O95859 305 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 GSTA2P09210 222 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 EBLN1P0CF75 366 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 CLN3Q13286 438 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 TGIF1Q15583 401 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 SPESP1Q6UW49 350 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 TMEM207Q6UWW9 146 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 DTX1Q86Y01 620 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 KMT5CQ86Y97 462 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 FAM20CQ8IXL6 584 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 CARFQ8N187 725 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 GPATCH11Q8N954 259 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 OR2L8Q8NGY9 312 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 EEF1AKMT1Q8WVE0 214 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 DLG3Q92796 817 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 RAD51AP1Q96B01 352 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 TRAPPC9Q96Q05 1148 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 OR6C1Q96RD1 312 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 KLHL25Q9H0H3 589 aa25.81■■□□□ 1.72
VEGFA-231ENST00000640499 TRMT6Q9UJA5 497 aaKnown RBP25.81■■□□□ 1.72
VEGFA-231ENST00000640499 ZBTB11O95625 1053 aaPredicted RBP25.8■■□□□ 1.72
VEGFA-231ENST00000640499 CBSLP0DN79 551 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 ENO3P13929 434 aaPredicted RBP25.8■■□□□ 1.72
VEGFA-231ENST00000640499 CDH3P22223 829 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 CBSP35520 551 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 SKIV2L2P42285 1042 aaKnown RBP25.8■■□□□ 1.72
VEGFA-231ENST00000640499 RAB15P59190 212 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 HSD11B2P80365 405 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 ZIC1Q15915 447 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 DCAF12Q5T6F0 453 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 SPACA3Q8IXA5 215 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 IFT81Q8WYA0 676 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 FOPNLQ96NB1 174 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 CORO1CQ9ULV4 474 aaPredicted RBP25.8■■□□□ 1.72
VEGFA-231ENST00000640499 BTRCQ9Y297 605 aa25.8■■□□□ 1.72
VEGFA-231ENST00000640499 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.79■■□□□ 1.72
VEGFA-231ENST00000640499 MYO1CO00159 1063 aa25.79■■□□□ 1.72
VEGFA-231ENST00000640499 CCNFP41002 786 aa25.79■■□□□ 1.72
VEGFA-231ENST00000640499 FOXM1Q08050 763 aa25.79■■□□□ 1.72
VEGFA-231ENST00000640499 FASTKQ14296 549 aaKnown RBP25.79■■□□□ 1.72
VEGFA-231ENST00000640499 TMEM164Q5U3C3 297 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms