RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 MICAL3Q7RTP6 2002 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 A0A1W2PQ09 198 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 TSPAN4O14817 238 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 PIP5K1BO14986 540 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 RFPL3O75679 317 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 SCELO95171 688 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 MT-CO1P00395 513 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 PAHP00439 452 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 HGFP14210 728 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 CPB1P15086 417 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 GRK5P34947 590 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 HERVK_113P63132 956 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF79Q15937 498 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 UNC50Q53HI1 259 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 PRSS36Q5K4E3 855 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 ANKRD34AQ69YU3 496 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 CCDC149Q6ZUS6 474 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 TMEM179BQ7Z7N9 219 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 KRT73Q86Y46 540 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 ABI1Q8IZP0 508 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 RBFAQ8N0V3 343 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 RNF139Q8WU17 664 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 PTP4A1Q93096 173 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 MSANTD3Q96H12 275 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 PGLYRP2Q96PD5 576 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 MLPHQ9BV36 600 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 ERVK-6Q9BXR3 956 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 CATSPERBQ9H7T0 1116 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 SLC39A1Q9NY26 324 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 PTTG3PQ9NZH4 202 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 POLG2Q9UHN1 485 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 FKBP7Q9Y680 259 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 MGAMO43451 1857 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 A0A0G2JMZ2 1700 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 LRRC37A2A6NM11 1700 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 GLTPD2A6NH11 291 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 TUBAL3A6NHL2 446 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 ERN1O75460 977 aaKnown RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 CYBBP04839 570 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 RETP07949 1114 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 F8A1P23610 371 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 RPL34P49207 117 aaKnown RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 GMPSP49915 693 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 POLR2JP52435 117 aaKnown RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 AIF1P55008 147 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 AP1S2P56377 157 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 UBE3AQ05086 875 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF267Q14586 743 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 GPR19Q15760 415 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 BAK1Q16611 211 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 MAP1SQ66K74 1059 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 DLEU7Q6UYE1 221 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 LRRC8DQ7L1W4 858 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 PM20D2Q8IYS1 436 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 GPC2Q8N158 579 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF366Q8N895 744 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF557Q8N988 423 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 VPS37AQ8NEZ2 397 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 OR7G3Q8NG95 312 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 OR8H1Q8NGG4 311 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 VANGL1Q8TAA9 524 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 SLC35F5Q8WV83 523 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 UFD1Q92890 307 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 MYDGFQ969H8 173 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 KIAA1143Q96AT1 154 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-221ENST00000638141 PTERQ96BW5 349 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 ADGRE2Q9UHX3 823 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 MUTYHQ9UIF7 546 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 FZD1Q9UP38 647 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 PCDHGB3Q9Y5G1 929 aa11.76□□□□□ -0.53
CAPN3-221ENST00000638141 DCLK1O15075 740 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 MAFO75444 373 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 WBP4O75554 376 aaKnown RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 SLC22A3O75751 556 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 CYP7B1O75881 506 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 RRASP10301 218 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 GRK1Q15835 563 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 KIAA0930Q6ICG6 404 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 TMEM81Q6P7N7 255 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 ENPP6Q6UWR7 440 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 TMPRSS11AQ6ZMR5 421 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 AHSA2Q719I0 299 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 HS6ST3Q8IZP7 471 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 CYP4Z2PQ8N1L4 340 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 C1orf127Q8N9H9 656 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF680Q8NEM1 530 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 DACT3Q96B18 629 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 C18orf25Q96B23 403 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 TUBGCP3Q96CW5 907 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 CRELD1Q96HD1 420 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 Q96MT0 163 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 SECISBP2Q96T21 854 aaKnown RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 USB1Q9BQ65 265 aaKnown RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 NUSAP1Q9BXS6 441 aaKnown RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 BEX2Q9BXY8 128 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 RPF1Q9H9Y2 349 aaKnown RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 CDHR5Q9HBB8 845 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 PTPRHQ9HD43 1115 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 OLA1Q9NTK5 396 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms