RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CLOCKO15516 846 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 UGDHO60701 494 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 LINC00271P0C7V0 271 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 TYRP14679 529 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 MAP4P27816 1152 aaKnown RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 RPS9P46781 194 aaKnown RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 SLC6A12P48065 614 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 HNRNPFP52597 415 aaKnown RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 MTPNP58546 118 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 YBX1P67809 324 aaKnown RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 BOP1Q14137 746 aaKnown RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 PTGR1Q14914 329 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 CPSF6Q16630 551 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLN8-212ENST00000637083 ZNF284Q2VY69 593 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 ATG9BQ674R7 924 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 TTC33Q6PID6 262 aaPredicted RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 MSANTD1Q6ZTZ1 278 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 Q6ZVU0 165 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 RALGPS2Q86X27 583 aaPredicted RBP11.84□□□□□ -0.51
CLN8-212ENST00000637083 EPHX4Q8IUS5 362 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 TMEM132CQ8N3T6 1108 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 TRAM1L1Q8N609 369 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 FAM47BQ8NA70 645 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 OR2A12Q8NGT7 310 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 SLC22A17Q8WUG5 538 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 ATL1Q8WXF7 558 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 VOPP1Q96AW1 172 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 SDCCAG3Q96C92 435 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 ZNF583Q96ND8 569 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 OR52E6Q96RD3 313 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 KCNH6Q9H252 994 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 ZFP14Q9HCL3 533 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 IL23AQ9NPF7 189 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 OLAHQ9NV23 265 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 ZNF639Q9UID6 485 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 SLCO3A1Q9UIG8 710 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 PCDHGB4Q9UN71 923 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 ERVW-1Q9UQF0 538 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 PCDHGB5Q9Y5G0 923 aa11.84□□□□□ -0.51
CLN8-212ENST00000637083 TSPAN11A1L157 253 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 ELOVL7A1L3X0 281 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 ZBBXA8MT70 800 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 ACOX3O15254 700 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 BMP10O95393 424 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 PDYNP01213 254 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 TCF3P15923 654 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 S100A3P33764 101 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 CAPGP40121 348 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
CLN8-212ENST00000637083 ESRRGP62508 458 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 SEMG2Q02383 582 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 EPS8Q12929 822 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 LSAMPQ13449 338 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 TEAD2Q15562 447 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 DPY19L1Q2PZI1 675 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 RUNDC3AQ59EK9 446 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 LIPJQ5W064 366 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 KIAA0907Q7Z7F0 614 aaPredicted RBP11.83□□□□□ -0.52
CLN8-212ENST00000637083 RIMKLAQ8IXN7 391 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 DTWD1Q8N5C7 304 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 CSGALNACT1Q8TDX6 532 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 ELMO1Q92556 727 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 ITCHQ96J02 903 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 VPS50Q96JG6 964 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 FARSBQ9NSD9 589 aaKnown RBP11.83□□□□□ -0.52
CLN8-212ENST00000637083 MARK1Q9P0L2 795 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 ZNHIT2Q9UHR6 403 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 CCL26Q9Y258 94 aa11.83□□□□□ -0.52
CLN8-212ENST00000637083 C16orf96A6NNT2 1141 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 UPK3BL1B0FP48 263 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 UPK3BL2E5RIL1 263 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 H0YAE9 185 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 PDLIM1O00151 329 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 XYLBO75191 536 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 ASLP04424 464 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 BCKDHAP12694 445 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 HOXA9P31269 272 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 PTCHD3Q3KNS1 767 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 SPANXN4Q5MJ08 99 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 LDLRAP1Q5SW96 308 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 NAIF1Q69YI7 327 aaPredicted RBP11.82□□□□□ -0.52
CLN8-212ENST00000637083 ASTLQ6HA08 431 aaPredicted RBP11.82□□□□□ -0.52
CLN8-212ENST00000637083 ABRAXAS1Q6UWZ7 409 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 PATL1Q86TB9 770 aaKnown RBP11.82□□□□□ -0.52
CLN8-212ENST00000637083 ADIPOR2Q86V24 386 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 RAVER1Q8IY67 606 aaKnown RBP11.82□□□□□ -0.52
CLN8-212ENST00000637083 METTL25Q8N6Q8 603 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 MRPL43Q8N983 215 aaKnown RBP11.82□□□□□ -0.52
CLN8-212ENST00000637083 CHST14Q8NCH0 376 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 STARD8Q92502 1023 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 TESCQ96BS2 214 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 FBXL8Q96CD0 374 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 METTL2AQ96IZ6 378 aaKnown RBP11.82□□□□□ -0.52
CLN8-212ENST00000637083 RDH12Q96NR8 316 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 PIF1Q9H611 641 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 VAPAQ9P0L0 249 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 MAPRE3Q9UPY8 281 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 INVSQ9Y283 1065 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 MAN2B2Q9Y2E5 1009 aa11.82□□□□□ -0.52
CLN8-212ENST00000637083 FADS3Q9Y5Q0 445 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms