RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 PLCL1Q15111 1095 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 AP5B1Q2VPB7 878 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 ZIK1Q3SY52 487 aaPredicted RBP3.9□□□□□ -1.78
SCN1A-214ENST00000637038 UGT3A2Q3SY77 523 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 RABL3Q5HYI8 236 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 NOMO2Q5JPE7 1267 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 PIK3R6Q5UE93 754 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 FAM219BQ5XKK7 198 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 ATG9BQ674R7 924 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 SPESP1Q6UW49 350 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 NUDT18Q6ZVK8 323 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 MICU2Q8IYU8 434 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 RBFAQ8N0V3 343 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 CENPSQ8N2Z9 138 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 OR13F1Q8NGS4 319 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 CEP76Q8TAP6 659 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 FBXO30Q8TB52 745 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 C2orf15Q8WU43 125 aaKnown RBP3.9□□□□□ -1.78
SCN1A-214ENST00000637038 IPCEF1Q8WWN9 437 aaPredicted RBP3.9□□□□□ -1.78
SCN1A-214ENST00000637038 SPACA7Q96KW9 195 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 ZNF512Q96ME7 567 aaPredicted RBP3.9□□□□□ -1.78
SCN1A-214ENST00000637038 NSMCE3Q96MG7 304 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 PPM1MQ96MI6 270 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 GORASP2Q9H8Y8 452 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 SFXN1Q9H9B4 322 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 PARVBQ9HBI1 364 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 TLR9Q9NR96 1032 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 PCTPQ9UKL6 214 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 AGO1Q9UL18 857 aaKnown RBP3.9□□□□□ -1.78
SCN1A-214ENST00000637038 CORO2BQ9UQ03 480 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 POLR3HQ9Y535 204 aaPredicted RBP3.9□□□□□ -1.78
SCN1A-214ENST00000637038 ARL5AQ9Y689 179 aa3.9□□□□□ -1.78
SCN1A-214ENST00000637038 A0A0U1RQF3 1178 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 OR51F1A6NGY5 319 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 DRGXA6NNA5 263 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 CXCR6O00574 342 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 DLGAP1O14490 977 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 UBFD1O14562 309 aaKnown RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 AURKAO14965 403 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 CNOT3O75175 753 aaKnown RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 NDUFS2O75306 463 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 ULK1O75385 1050 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 OR4F21O95013 312 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 SNAP29O95721 258 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 GSNP06396 782 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 HIST1H2AGP0C0S8 130 aaPredicted RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 ATXN1LP0C7T5 689 aaKnown RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 IL9P15248 144 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 HIST1H2ADP20671 130 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 PPIBP23284 216 aaKnown RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 IL12AP29459 219 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 STT3AP46977 705 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 OR1G1P47890 313 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 RABGGTBP53611 331 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 DIO3P55073 304 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 RPL38P63173 70 aaKnown RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 ADAM17P78536 824 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 BEX3Q00994 111 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 CTBSQ01459 385 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 ABRQ12979 859 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 BNIP3Q12983 259 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 EIF2B5Q13144 721 aaKnown RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 GTF2H2Q13888 395 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 IHHQ14623 411 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 SUZ12Q15022 739 aaKnown RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 CYBRD1Q53TN4 286 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF789Q5FWF6 425 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 TCEAL5Q5H9L2 206 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 EGFLAMQ63HQ2 1017 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 SULT1C3Q6IMI6 304 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 ALKBH2Q6NS38 261 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 TMEM214Q6NUQ4 689 aaKnown RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 FBXL22Q6P050 247 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 GTF2H2CQ6P1K8 395 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 MSANTD1Q6ZTZ1 278 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 CCDC80Q76M96 950 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 LYSMD3Q7Z3D4 306 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 SYVN1Q86TM6 617 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 METTL3Q86U44 580 aaKnown RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 P3H2Q8IVL5 708 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 ARRDC2Q8TBH0 407 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 BPIFB1Q8TDL5 484 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 HASPINQ8TF76 798 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 CHPT1Q8WUD6 406 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 NELL1Q92832 810 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 HIST1H2AHQ96KK5 128 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 C3orf30Q96M34 536 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 NECAB3Q96P71 396 aaPredicted RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 ACOX2Q99424 681 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 SLC30A3Q99726 388 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 HIST1H2AJQ99878 128 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 ADAM2Q99965 735 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 H2AFJQ9BTM1 129 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 SLC52A3Q9NQ40 469 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 DCAF16Q9NXF7 216 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 SELENONQ9NZV5 590 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 EIF2B4Q9UI10 523 aaKnown RBP3.9□□□□□ -1.79
SCN1A-214ENST00000637038 DNMT3LQ9UJW3 386 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF229Q9UJW7 825 aa3.9□□□□□ -1.79
SCN1A-214ENST00000637038 CDC14AQ9UNH5 594 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms