RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 DCTP40126 519 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 STK19P49842 368 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 TCTN1Q2MV58 587 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 POM121L1PQ3SYA9 428 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 LAIR2Q6ISS4 152 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 ZCCHC8Q6NZY4 707 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 NCEH1Q6PIU2 408 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 FKBP9P1Q75LS8 142 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 CEP68Q76N32 757 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 DEFB128Q7Z7B8 93 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 DPP10Q8N608 796 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 ADAMTS16Q8TE57 1224 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 NRBF2Q96F24 287 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 MYO19Q96H55 970 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 P2RY12Q9H244 342 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 RAD21L1Q9H4I0 556 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 LHX3Q9UBR4 397 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 ABCG2Q9UNQ0 655 aa13.72□□□□□ -0.21
CACNA1A-228ENST00000636610 CFAP99D6REC4 459 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 EPB42P16452 691 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 MAGP20916 626 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 PSMB9P28065 219 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 RXRGP48443 463 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 RGS4P49798 205 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 NFATC2Q13469 925 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 Q6ZPB1 254 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 DCDC5Q6ZRR9 648 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 TSPEARQ8WU66 669 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 GLMNQ92990 594 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 ACPTQ9BZG2 426 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 DNAJB9Q9UBS3 223 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 ZNF639Q9UID6 485 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 SCN4AP35499 1836 aa13.71□□□□□ -0.21
CACNA1A-228ENST00000636610 FADS2O95864 444 aaKnown RBP13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 GALTP07902 379 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 BPIP17213 487 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 TPP2P29144 1249 aaPredicted RBP13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 IDUAP35475 653 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 DGKEP52429 567 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 CCL23P55773 120 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 FCGRTP55899 365 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 DNASE1L3Q13609 305 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 MRPL58Q14197 206 aaKnown RBP13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 KIAA0040Q15053 153 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 CYP27C1Q4G0S4 372 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 ZNF648Q5T619 568 aaPredicted RBP13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 ALG1LQ6GMV1 187 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 IGFN1Q86VF2 1251 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 PSD4Q8NDX1 1056 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 NDNFQ8TB73 568 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 RHBDF1Q96CC6 855 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 TPD52L3Q96J77 140 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 PPP3R2Q96LZ3 170 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 OSBPL10Q9BXB5 764 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 C1QTNF3Q9BXJ4 246 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 ALOXE3Q9BYJ1 711 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 CD244Q9BZW8 370 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 SMG9Q9H0W8 520 aaKnown RBP13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 PSME2Q9UL46 239 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 CCL27Q9Y4X3 112 aa13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 TNPO3Q9Y5L0 923 aaKnown RBP13.71□□□□□ -0.22
CACNA1A-228ENST00000636610 TMEM247A6NEH6 219 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 IFRD1O00458 451 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 MANBAO00462 879 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 GAPDHSO14556 408 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 TULP3O75386 442 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 S100A3P33764 101 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 HMGCLP35914 325 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 KPNA1P52294 538 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 CARD16Q5EG05 197 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 DHRS4L2Q6PKH6 230 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ANGPTL8Q6UXH0 198 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ZNF621Q6ZSS3 439 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 LRRC8DQ7L1W4 858 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ZNF551Q7Z340 670 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ZSWIM9Q86XI8 627 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 CROCCP3Q8IVE0 287 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ALDH16A1Q8IZ83 802 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 EID3Q8N140 333 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ZBTB2Q8N680 514 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 BEND7Q8N7W2 519 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ABHD11Q8NFV4 315 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 OR7A2PQ8NGA2 310 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 RPL3LQ92901 407 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ASIC4Q96FT7 647 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 APIPQ96GX9 242 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 CASD1Q96PB1 797 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 NODALQ96S42 347 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 MTERF1Q99551 399 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ELOVL6Q9H5J4 265 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ZNF510Q9Y2H8 683 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 SLC1A7O00341 560 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 STK16O75716 305 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ZDHHC11BP0C7U3 371 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 RPIAP49247 311 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 GRIK2Q13002 908 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 PCBP2Q15366 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 TTC23Q5W5X9 447 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms