RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 RPS3P23396 243 aaKnown RBP eCLIP17.78■□□□□ 0.44
CLN6-214ENST00000636314 AOAHP28039 575 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 KLRB1Q12918 225 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 SPESP1Q6UW49 350 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 UNC5AQ6ZN44 842 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 CAND1Q86VP6 1230 aaKnown RBP17.78■□□□□ 0.44
CLN6-214ENST00000636314 ATCAYQ86WG3 371 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 VRK3Q8IV63 474 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 KLHL25Q9H0H3 589 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 LATS2Q9NRM7 1088 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 OR6C2Q9NZP2 312 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 PLAGL1Q9UM63 463 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 CDYLQ9Y232 598 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 NEU2Q9Y3R4 380 aa17.78■□□□□ 0.44
CLN6-214ENST00000636314 USP9YO00507 2555 aaPredicted RBP17.78■□□□□ 0.44
CLN6-214ENST00000636314 TMEM150CB9EJG8 249 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 KPNA5O15131 536 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 CHRM5P08912 532 aaPredicted RBP17.77■□□□□ 0.44
CLN6-214ENST00000636314 UGT2B7P16662 529 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 TCP1P17987 556 aaKnown RBP17.77■□□□□ 0.44
CLN6-214ENST00000636314 OGNP20774 298 aaKnown RBP17.77■□□□□ 0.44
CLN6-214ENST00000636314 F8A1P23610 371 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 DNASE1L3Q13609 305 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 TYSND1Q2T9J0 566 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 UNC5DQ6UXZ4 953 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 OTOAQ7RTW8 1153 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 TRIM73Q86UV7 250 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 DCUN1D3Q8IWE4 304 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 MCUQ8NE86 351 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 CFAP61Q8NHU2 1237 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 CT55Q8WUE5 264 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 MIB2Q96AX9 1013 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 ZNF669Q96BR6 464 aaPredicted RBP17.77■□□□□ 0.44
CLN6-214ENST00000636314 SERPINB12Q96P63 405 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 TRAPPC9Q96Q05 1148 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 SYTL2Q9HCH5 934 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 KCND3Q9UK17 655 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 PCDHB3Q9Y5E6 796 aa17.77■□□□□ 0.44
CLN6-214ENST00000636314 SDR42E2A6NKP2 422 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 USP27XA6NNY8 438 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 KATNA1O75449 491 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 MSL3P1P0C860 447 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 TPBGLP0DKB5 382 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 PKLRP30613 574 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 ABRQ12979 859 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 DHX34Q14147 1143 aaKnown RBP17.76■□□□□ 0.43
CLN6-214ENST00000636314 PPP1R7Q15435 360 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 C4orf17Q53FE4 359 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 CTSL3PQ5NE16 218 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 C19orf47Q8N9M1 422 aaKnown RBP17.76■□□□□ 0.43
CLN6-214ENST00000636314 TEX19Q8NA77 164 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 SKA2Q8WVK7 121 aaPredicted RBP17.76■□□□□ 0.43
CLN6-214ENST00000636314 LPGAT1Q92604 370 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 TCF12Q99081 682 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 TRIM56Q9BRZ2 755 aaKnown RBP17.76■□□□□ 0.43
CLN6-214ENST00000636314 LRRC4CQ9HCJ2 640 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 SPHK1Q9NYA1 384 aa17.76■□□□□ 0.43
CLN6-214ENST00000636314 TNRC6AQ8NDV7 1962 aaKnown RBP17.75■□□□□ 0.43
CLN6-214ENST00000636314 FAM237BA0A1B0GVD1 139 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 ISM1B1AKI9 464 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 C21orf140B9A014 251 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 H3BMM5 538 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 SLCO2B1O94956 709 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 CYP2A7P20853 494 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 FMO4P31512 558 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 RAB28P51157 221 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 MLLT10P55197 1068 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 CRTC2Q53ET0 693 aaPredicted RBP17.75■□□□□ 0.43
CLN6-214ENST00000636314 PPIL6Q8IXY8 311 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 OR1L3Q8NH93 324 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 N4BP2L2Q92802 583 aaPredicted RBP17.75■□□□□ 0.43
CLN6-214ENST00000636314 PDLIM2Q96JY6 352 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 PSMG3-AS1Q96PY0 264 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 OR2A14Q96R47 310 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 IL1RAPL1Q9NZN1 696 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 ASIC3Q9UHC3 531 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 VPS9D1Q9Y2B5 631 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 KCNMB2Q9Y691 235 aa17.75■□□□□ 0.43
CLN6-214ENST00000636314 SNRNP200O75643 2136 aaKnown RBP17.75■□□□□ 0.43
CLN6-214ENST00000636314 A0A0J9YY10 115 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 MAGEB16A2A368 324 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 MKRN2OSH3BPM6 223 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 NIPSNAP2O75323 286 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 ESR1P03372 595 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 GPS2Q13227 327 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 THOC5Q13769 683 aaKnown RBP17.74■□□□□ 0.43
CLN6-214ENST00000636314 ERV3-1Q14264 604 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 KIR2DS3Q14952 304 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 KYNUQ16719 465 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 ANKRD20A4Q4UJ75 823 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 PLEKHS1Q5SXH7 462 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 ZNF470Q6ECI4 717 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 NEPROQ6NW34 567 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 TTC23LQ6PF05 361 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 CDHR3Q6ZTQ4 885 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 CILP2Q8IUL8 1156 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 NAT8LQ8N9F0 302 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 MR1Q95460 341 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 CLIP3Q96DZ5 547 aa17.74■□□□□ 0.43
CLN6-214ENST00000636314 BIRC8Q96P09 236 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms