RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TFEBP19484 476 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 KCNJ2P63252 427 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 TSNQ15631 228 aaKnown RBP14.07□□□□□ -0.16
LINC00339-208ENST00000634934 TSNAXIP1Q2TAA8 658 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 HHATQ5VTY9 493 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 UBE2R2Q712K3 238 aaPredicted RBP14.07□□□□□ -0.16
LINC00339-208ENST00000634934 TRIM48Q8IWZ4 208 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 RAB3IL1Q8TBN0 382 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 ASB11Q8WXH4 323 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 CXorf40BQ96DE9 158 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 APOPT1Q96IL0 206 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 FERD3LQ96RJ6 166 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 EDEM2Q9BV94 578 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 IQCGQ9H095 443 aaKnown RBP14.07□□□□□ -0.16
LINC00339-208ENST00000634934 ALG9Q9H6U8 611 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 DCDC2Q9UHG0 476 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 BAIAP2L1Q9UHR4 511 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 ADAMTS6Q9UKP5 1117 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 CEP250Q9BV73 2442 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 CABIN1Q9Y6J0 2220 aa14.07□□□□□ -0.16
LINC00339-208ENST00000634934 OR5K4A6NMS3 321 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 GLRA3O75311 464 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 MATN4O95460 622 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 CATP04040 527 aaKnown RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 C8GP07360 202 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 KRT16P08779 473 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 TROVE2P10155 538 aaKnown RBP eCLIP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 ALPPL2P10696 532 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 MTHFD1P11586 935 aaKnown RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 MAP4P27816 1152 aaKnown RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 CRHR1P34998 444 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 RPA3P35244 121 aaPredicted RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 MAPK9P45984 424 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 BDKRB1P46663 353 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 KPNA2P52292 529 aaKnown RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 ACAP2Q15057 778 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 C16orf46Q6P387 395 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 TTC23LQ6PF05 361 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 UNC5DQ6UXZ4 953 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 CDHR3Q6ZTQ4 885 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 KANSL1Q7Z3B3 1105 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 NAGSQ8N159 534 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 ENDOVQ8N8Q3 282 aaKnown RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 OR5AR1Q8NGP9 310 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 ZNF75CPQ92670 426 aaPredicted RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 PTERQ96BW5 349 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 RSRC1Q96IZ7 334 aaKnown RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 GPR78Q96P69 363 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 TRIT1Q9H3H1 467 aaKnown RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 NLGN3Q9NZ94 848 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 ZNF624Q9P2J8 865 aaPredicted RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 TDRKHQ9Y2W6 561 aaKnown RBP14.06□□□□□ -0.16
LINC00339-208ENST00000634934 HEBP2Q9Y5Z4 205 aa14.06□□□□□ -0.16
LINC00339-208ENST00000634934 KIR2DS5A0A0G2JLQ3 304 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 PRAMEF33A0A0G2JMD5 474 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 A0A0G2JNG1 304 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 PABPN1LA6NDY0 278 aaKnown RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 KIR2DS3K7RE56 304 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 CDX4O14627 284 aaPredicted RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 KIF1CO43896 1103 aaKnown RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 PCDHGA12O60330 932 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 PSIP1O75475 530 aaKnown RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 VIPP01282 170 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 RPN2P04844 631 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 GIMD1P0DJR0 217 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 CYP2A7P20853 494 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 GCKP35557 465 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 SLC19A1P41440 591 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 PRKG2Q13237 762 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 BIRC2Q13490 618 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 KIR2DS5Q14953 304 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 SUZ12Q15022 739 aaKnown RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 OR4D1Q15615 310 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 C6orf132Q5T0Z8 1188 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 N4BP2L1Q5TBK1 243 aaPredicted RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 FRA10AC1Q70Z53 315 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 ADAMTSL2Q86TH1 951 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 ISCA2Q86U28 154 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 LCA5Q86VQ0 697 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 TRIM42Q8IWZ5 723 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 SFRP1Q8N474 314 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 EID2Q8N6I1 236 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 STAG3L4Q8TBR4 150 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 MAPK15Q8TD08 544 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 SLC37A2Q8TED4 501 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 AGAP11Q8TF27 550 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 EXT2Q93063 718 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 KIAA1191Q96A73 305 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 HGH1Q9BTY7 390 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 DUSP23Q9BVJ7 150 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 MYLK2Q9H1R3 596 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 C12orf65Q9H3J6 166 aaKnown RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 TFB2MQ9H5Q4 396 aaKnown RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 CXorf56Q9H5V9 222 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 TMEM9BQ9NQ34 198 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 DNAAF2Q9NVR5 837 aaKnown RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 UTP6Q9NYH9 597 aaKnown RBP14.05□□□□□ -0.16
LINC00339-208ENST00000634934 TMEM216Q9P0N5 145 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 CIDEBQ9UHD4 219 aa14.05□□□□□ -0.16
LINC00339-208ENST00000634934 GRID1Q9ULK0 1009 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms