RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 VPS28Q9UK41 221 aa2.89□□□□□ -1.95
SRP54-214ENST00000630962 WDR37Q9Y2I8 494 aa2.89□□□□□ -1.95
SRP54-214ENST00000630962 COL5A2P05997 1499 aaPredicted RBP2.89□□□□□ -1.95
SRP54-214ENST00000630962 GPR75-ASB3A0A0A6YYF3 556 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 A0A1W2PQ09 198 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 ANKUB1A6NFN9 424 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 AGAP14A8MT82 685 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 HEPACAM2A8MVW5 462 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 GLRA3O75311 464 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 ERAL1O75616 437 aaKnown RBP2.88□□□□□ -1.95
SRP54-214ENST00000630962 CREG1O75629 220 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 WDPCPO95876 746 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 PAX3P23760 479 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 GCH1P30793 250 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 HOXD13P35453 343 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 CCR10P46092 362 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 EIF5P55010 431 aaKnown RBP2.88□□□□□ -1.95
SRP54-214ENST00000630962 UBXN2AP68543 259 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 CUL4AQ13619 759 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 LPAL2Q16609 132 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 FASTKD1Q53R41 847 aaKnown RBP2.88□□□□□ -1.95
SRP54-214ENST00000630962 LCN1P1Q5VSP4 162 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 C11orf63Q6NUN7 778 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 G2E3Q7L622 706 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 SZRD1Q7Z422 152 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 KIRREL3Q8IZU9 778 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 C17orf53Q8N3J3 647 aaPredicted RBP2.88□□□□□ -1.95
SRP54-214ENST00000630962 TTC30BQ8N4P2 665 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 OR13C3Q8NGS6 347 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 OR13J1Q8NGT2 312 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 OR2AJ1Q8NGZ0 328 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 OR52N5Q8NH56 324 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 FAM222BQ8WU58 562 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 PRPF31Q8WWY3 499 aaKnown RBP2.88□□□□□ -1.95
SRP54-214ENST00000630962 CENPTQ96BT3 561 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 CALML4Q96GE6 196 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 RSRC1Q96IZ7 334 aaKnown RBP2.88□□□□□ -1.95
SRP54-214ENST00000630962 NSMCE3Q96MG7 304 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 URM1Q9BTM9 101 aaKnown RBP2.88□□□□□ -1.95
SRP54-214ENST00000630962 CABLES2Q9BTV7 478 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 NUP85Q9BW27 656 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 SERINC1Q9NRX5 453 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 GKN1Q9NS71 199 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 NSMCE4AQ9NXX6 385 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 WSB2Q9NYS7 404 aaPredicted RBP2.88□□□□□ -1.95
SRP54-214ENST00000630962 C19orf25Q9UFG5 118 aaPredicted RBP2.88□□□□□ -1.95
SRP54-214ENST00000630962 DDX25Q9UHL0 483 aaKnown RBP2.88□□□□□ -1.95
SRP54-214ENST00000630962 MTUS1Q9ULD2 1270 aa2.88□□□□□ -1.95
SRP54-214ENST00000630962 MSGN1A6NI15 193 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 C2orf81A6NN90 581 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 O00370 1275 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 DOK2O60496 412 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 CDK2AP2O75956 126 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 SORBS2O94875 1100 aaKnown RBP2.87□□□□□ -1.95
SRP54-214ENST00000630962 VTNP04004 478 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 GPIP06744 558 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 TRIM21P19474 475 aaKnown RBP2.87□□□□□ -1.95
SRP54-214ENST00000630962 MNDAP41218 407 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 MTHFRP42898 656 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 GEMIN4P57678 1058 aaKnown RBP2.87□□□□□ -1.95
SRP54-214ENST00000630962 KLC1Q07866 573 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 HSPB3Q12988 150 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 MTHFSDQ2M296 383 aaKnown RBP2.87□□□□□ -1.95
SRP54-214ENST00000630962 ITPRIPL2Q3MIP1 535 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 KRT71Q3SY84 523 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 HYIQ5T013 277 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 ITPRIPL1Q6GPH6 555 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 CLEC17AQ6ZS10 378 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 ADGRA1Q86SQ6 560 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 P2RY8Q86VZ1 359 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 HOGA1Q86XE5 327 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 FAM114A1Q8IWE2 563 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 CDK20Q8IZL9 346 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 FBXO39Q8N4B4 442 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 MINDY1Q8N5J2 469 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 APPL2Q8NEU8 664 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 OR10S1Q8NGN2 331 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 OR5M8Q8NGP6 311 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 LPGAT1Q92604 370 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 SPACA9Q96E40 222 aaPredicted RBP2.87□□□□□ -1.95
SRP54-214ENST00000630962 PRAC1Q96KF2 57 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 SFXN2Q96NB2 322 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 IWS1Q96ST2 819 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 CDRT15Q96T59 188 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 PAFAH2Q99487 392 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 RAD9AQ99638 391 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 NKX3-1Q99801 234 aaPredicted RBP2.87□□□□□ -1.95
SRP54-214ENST00000630962 VGLL1Q99990 258 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 SDF4Q9BRK5 362 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 CCDC68Q9H2F9 335 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 PANK3Q9H999 370 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 A4GALTQ9NPC4 353 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 PAK5Q9P286 719 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 TMEM181Q9P2C4 612 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 B3GAT1Q9P2W7 334 aa2.87□□□□□ -1.95
SRP54-214ENST00000630962 PPIEQ9UNP9 301 aaKnown RBP2.87□□□□□ -1.95
SRP54-214ENST00000630962 LOC102723996A0A087X1L8 192 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 GLOD5A6NK44 160 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms